| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946168
Identifier: 119946168
GI number: 119946168
Start: 3088581
End: 3089654
Strand: Direct
Name: 119946168
Synonym: Ping_2528
Alternate gene names: NA
Gene position: 3088581-3089654 (Clockwise)
Preceding gene: 119946167
Following gene: 119946169
Centisome position: 67.74
GC content: 40.88
Gene sequence:
>1074_bases ATGACTACCAACAATTATTTAAAGCCATTAGCGATGCTGGAGAATTTAGAAAGTAGAGCTGTGCTGAAAGCGACAGTTAA AGCTCGTGCAGCTCTCGCAGAGCTACAAGGTTTGACGAACAGCCTGCCTAATCCGCATTTACTTATTGCAACACTGTCAC TTCAAGAAGCGCGTGAAAGCTCTGAGATAGAAGATATTGTGACAACGCAAGATGAGCTATACCGTAGTAATTACAAGGCA AGGCAATTTACTTCGGCGAGCGCCAAGGAAGTGCACGACTATGCTGTCGCTCTTACCTTTGGCTTTGACATAGTACAAAA GACAGGCTTGCTTACGAACAACACAATCTGCGAAATCCAGAAGAATATAGAACATAACAATGCGGGTTTTCGTAAGCAAG GCGGCACCGTTCTTAAGAATGAAAAAACGGATGAAGTTATCCATACACCTCCACAAACAGAACAAGAAGTGCTTAATTTA ATGGGCGCTTTGGAAGCCTTTATCAATAATAACGACCTCTCGGATTATGACGAGCTAGTCAAGATGGCACTCATACATCA TCAGTTCGAAAGCATACATCCGTTCTACGATGGTAACGGAAGAACGGGCCGCATAATCAATATATTGTACCTGTGCAAGC AAGGTTTGCTCGATACCCCCGTGCTATACATATCAAGCTACCTTAATCAGCACAAATCTGACTACTACAAACATTTGCAG CATGTACGCGAGACTGGTGACTGGGAGGAATGGATTTTGTATATGCTAAAAGCCGTGCAAATAACCAGCCAAGATACACT ACGCACTATAAAGCGCTTACTTGCGCTGATGCAAGAGCATAAACATATCATTAAAGCGACTTTCCCAAAGATGTATAGTC ATGAGTTGATTAATCATCTTTTCACACATCCTTATACGAAAGTCGAATTTGCTAAAGATGAACTTGATATACATAGAAAT ACAGCACGAAACTATTTAAACAAGCTAGTTAAAATTGGAATCTTAGATAAGATCGAGCATGGCAATGAGTACTACTATCT AAACACATCACTATGCGGACTATTTACAAAGTGA
Upstream 100 bases:
>100_bases CTGCACTCAAAAACGCCATTCTGTGTGCGCACCTCGACAGCTGCACTCAAAAACGCTATTCTGTGTGCACAAAAAGAACA ACTAAATATGGATTACTACG
Downstream 100 bases:
>100_bases AATATTCTAATGAAGGTTAAATAAAGTTTACAAATAGGAGGAAATTTAGATCCCTATTTGTGACCAAACCAATATCTTGG ATTCAAATAGTAAGCGCATA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTTNNYLKPLAMLENLESRAVLKATVKARAALAELQGLTNSLPNPHLLIATLSLQEARESSEIEDIVTTQDELYRSNYKA RQFTSASAKEVHDYAVALTFGFDIVQKTGLLTNNTICEIQKNIEHNNAGFRKQGGTVLKNEKTDEVIHTPPQTEQEVLNL MGALEAFINNNDLSDYDELVKMALIHHQFESIHPFYDGNGRTGRIINILYLCKQGLLDTPVLYISSYLNQHKSDYYKHLQ HVRETGDWEEWILYMLKAVQITSQDTLRTIKRLLALMQEHKHIIKATFPKMYSHELINHLFTHPYTKVEFAKDELDIHRN TARNYLNKLVKIGILDKIEHGNEYYYLNTSLCGLFTK
Sequences:
>Translated_357_residues MTTNNYLKPLAMLENLESRAVLKATVKARAALAELQGLTNSLPNPHLLIATLSLQEARESSEIEDIVTTQDELYRSNYKA RQFTSASAKEVHDYAVALTFGFDIVQKTGLLTNNTICEIQKNIEHNNAGFRKQGGTVLKNEKTDEVIHTPPQTEQEVLNL MGALEAFINNNDLSDYDELVKMALIHHQFESIHPFYDGNGRTGRIINILYLCKQGLLDTPVLYISSYLNQHKSDYYKHLQ HVRETGDWEEWILYMLKAVQITSQDTLRTIKRLLALMQEHKHIIKATFPKMYSHELINHLFTHPYTKVEFAKDELDIHRN TARNYLNKLVKIGILDKIEHGNEYYYLNTSLCGLFTK >Mature_356_residues TTNNYLKPLAMLENLESRAVLKATVKARAALAELQGLTNSLPNPHLLIATLSLQEARESSEIEDIVTTQDELYRSNYKAR QFTSASAKEVHDYAVALTFGFDIVQKTGLLTNNTICEIQKNIEHNNAGFRKQGGTVLKNEKTDEVIHTPPQTEQEVLNLM GALEAFINNNDLSDYDELVKMALIHHQFESIHPFYDGNGRTGRIINILYLCKQGLLDTPVLYISSYLNQHKSDYYKHLQH VRETGDWEEWILYMLKAVQITSQDTLRTIKRLLALMQEHKHIIKATFPKMYSHELINHLFTHPYTKVEFAKDELDIHRNT ARNYLNKLVKIGILDKIEHGNEYYYLNTSLCGLFTK
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 41081; Mature: 40950
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNNYLKPLAMLENLESRAVLKATVKARAALAELQGLTNSLPNPHLLIATLSLQEARES CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHH SEIEDIVTTQDELYRSNYKARQFTSASAKEVHDYAVALTFGFDIVQKTGLLTNNTICEIQ HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH KNIEHNNAGFRKQGGTVLKNEKTDEVIHTPPQTEQEVLNLMGALEAFINNNDLSDYDELV HHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH KMALIHHQFESIHPFYDGNGRTGRIINILYLCKQGLLDTPVLYISSYLNQHKSDYYKHLQ HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH HVRETGDWEEWILYMLKAVQITSQDTLRTIKRLLALMQEHKHIIKATFPKMYSHELINHL HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTHPYTKVEFAKDELDIHRNTARNYLNKLVKIGILDKIEHGNEYYYLNTSLCGLFTK HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCC >Mature Secondary Structure TTNNYLKPLAMLENLESRAVLKATVKARAALAELQGLTNSLPNPHLLIATLSLQEARES CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHH SEIEDIVTTQDELYRSNYKARQFTSASAKEVHDYAVALTFGFDIVQKTGLLTNNTICEIQ HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH KNIEHNNAGFRKQGGTVLKNEKTDEVIHTPPQTEQEVLNLMGALEAFINNNDLSDYDELV HHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH KMALIHHQFESIHPFYDGNGRTGRIINILYLCKQGLLDTPVLYISSYLNQHKSDYYKHLQ HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH HVRETGDWEEWILYMLKAVQITSQDTLRTIKRLLALMQEHKHIIKATFPKMYSHELINHL HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTHPYTKVEFAKDELDIHRNTARNYLNKLVKIGILDKIEHGNEYYYLNTSLCGLFTK HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]