Click here to switch to the map view.

The map label for this gene is 119946167

Identifier: 119946167

GI number: 119946167

Start: 3086973

End: 3087743

Strand: Direct

Name: 119946167

Synonym: Ping_2527

Alternate gene names: NA

Gene position: 3086973-3087743 (Clockwise)

Preceding gene: 119946160

Following gene: 119946168

Centisome position: 67.7

GC content: 38.13

Gene sequence:

>771_bases
ATGATTTACAACAACCTGGACTGGCTTTCTTATTGGTATATAGAGGATTATATTACCTTAACCAATGTGCAGGAAGCGGA
GTTTGATCCGGCATTAGTGCAGTTTTTAGACTGGCACCGAAAATCAGAATTACCAAGCTACCTTACTCAGATTAAGCAAA
TTAAACAGGATATCAATAACGGGTTGGAACAGACCGATATAGAAGCTTATATGAAAACCTTTGAAGGCTTCTGGCAGGCT
ATTTTAATTGGCATAGAACCGGGTGTGCTGAAGTTAGCCTATTCACTAAAAGAGGAACAAATAACGGAGTTTTTAGCGGC
CAATGAAAAGAAAAATCGGGATAGGGTTGAGGAGTTTGAGGATTTAAGTGAGCAAGCAAGATTAGATAAGAGATTTGATA
AAATTGAAAGCCGATTATCCTCCTTTATCGGTAAGCTTGACCCAGCACAAAAGCAATTAATCAATAGTACCAACGAGCAA
CAATTATCGACATTTGTTGAATGGATTGAGTTTCGCCGTAATTGGGCAAATTCGATACGGGAAGCTTATACCCTGCAAGG
TGATAAACCCGCTTTTGAAAAAGCATTAAGGCGTTCGATTTTGCAGGCTGACTCTTTTCGTTCAGCGCAATTTAAGCAAA
AAACAGAATATAATAAAACCCTGTGGAAAGTGACGTTCGCGCAGTTAATTGACTCTTTAAATAAAAAACAATTGCAGAAA
CTCAATAACAAGTTGGACGATATTATTGAAGACTTAGAGGCCTTATTGTAG

Upstream 100 bases:

>100_bases
AATATTATTACACCTGGAGCTAAGCTTGATTAAAAACAAAAAACACCGCGGATTTTTGCTGGTCTTCCTTTTATTAGGGG
TATCGGCATGCAGTTCAAAA

Downstream 100 bases:

>100_bases
GGGATTGGGACCTTTAGTGCGCATTTTTGCCCGTCATTATCGAGGTCAGTTAGTCGATAATCCCAGTGCATATTTCGCAT
AGAAGACTCAGTTCCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase III Alpha Subunit; Rare Lipoprotein A

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIYNNLDWLSYWYIEDYITLTNVQEAEFDPALVQFLDWHRKSELPSYLTQIKQIKQDINNGLEQTDIEAYMKTFEGFWQA
ILIGIEPGVLKLAYSLKEEQITEFLAANEKKNRDRVEEFEDLSEQARLDKRFDKIESRLSSFIGKLDPAQKQLINSTNEQ
QLSTFVEWIEFRRNWANSIREAYTLQGDKPAFEKALRRSILQADSFRSAQFKQKTEYNKTLWKVTFAQLIDSLNKKQLQK
LNNKLDDIIEDLEALL

Sequences:

>Translated_256_residues
MIYNNLDWLSYWYIEDYITLTNVQEAEFDPALVQFLDWHRKSELPSYLTQIKQIKQDINNGLEQTDIEAYMKTFEGFWQA
ILIGIEPGVLKLAYSLKEEQITEFLAANEKKNRDRVEEFEDLSEQARLDKRFDKIESRLSSFIGKLDPAQKQLINSTNEQ
QLSTFVEWIEFRRNWANSIREAYTLQGDKPAFEKALRRSILQADSFRSAQFKQKTEYNKTLWKVTFAQLIDSLNKKQLQK
LNNKLDDIIEDLEALL
>Mature_256_residues
MIYNNLDWLSYWYIEDYITLTNVQEAEFDPALVQFLDWHRKSELPSYLTQIKQIKQDINNGLEQTDIEAYMKTFEGFWQA
ILIGIEPGVLKLAYSLKEEQITEFLAANEKKNRDRVEEFEDLSEQARLDKRFDKIESRLSSFIGKLDPAQKQLINSTNEQ
QLSTFVEWIEFRRNWANSIREAYTLQGDKPAFEKALRRSILQADSFRSAQFKQKTEYNKTLWKVTFAQLIDSLNKKQLQK
LNNKLDDIIEDLEALL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30325; Mature: 30325

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA