| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946159
Identifier: 119946159
GI number: 119946159
Start: 3077489
End: 3079693
Strand: Reverse
Name: 119946159
Synonym: Ping_2519
Alternate gene names: NA
Gene position: 3079693-3077489 (Counterclockwise)
Preceding gene: 119946161
Following gene: 119946157
Centisome position: 67.54
GC content: 37.37
Gene sequence:
>2205_bases ATGGTTAATATCATACAAGAACACACTTATTTTGAATCCATGCATGAAAGCTTAATTGCTCAGGGCTATTGCTTTGATGA TTCTGCCATAGAAACTATTGAGGCTTATTTGTCAGGTAAGCCGGTGAAGTCTCAAAAACAGAAAGAGGTGAATAAAAATA AGCTGTTTTGGTCTTCAGCATTTCTATGGGATTTGAGTGATCAAGTTTTAAACTCAGAAACCTTTATTCTCGCTTTGGCA CGTTATTTTTCCGTTGATAACTTTTCTAACGTCAGCTTACTTGAACAAATTACTTATAAAGCCCCTAAAGCTATTAGAAA GGGAATTAGAAGTTCTGAAATAGTACTAAGGGCAAATAGCGGTAAATGGATAGAAGCGCAGCAATTAGCTGAGCGGAGTC CGGATGAATTGGATGAACTGATCAATATTTGTAAGGCATTCCAAAAAGTACATAAAGATTGCCTTGAATTAGTCGCTAAA TACCAGACGCCTTTTAACGCGTTAACGGTATTTGAGTTATTAAGTTATTCGAGTGTGTATGCCTTCAAATATTTATTTGA TAATCCGGAAGCACTTGATGGCAGTATGATTTCAACGGGTGAGCGTTTCCACGCGTTAAAAGAGCTCGTTGAGTGGAAGT TAAGGATAGCTGAGCCCAATTCATTTTTACTTAACGATAGTGTGATAGGTAAATCACTAAAAATACATCAAGCACCCTTG GTCTTTCCTTCTGAAGAAGATTCATACATACCTGATTTTTATTTATACCATTTTGAAAAATTGATGCAGGCACAGGTTGA GTTAGATGGTTTCTTATCTCGATCTGTAATGCCATTTTGTTTTGATGATCAGTGTGAATATTATTTGGATGGTGGCCGCT TAGAAATGCACAAGAATAGTGATGCGGGTGATCAGGTTTGGTTATTAAATGGTAAGAAACAAAGTCTAATAGATGGGTAT TGGCTAAATCGCGGCTTGCAGGAATTTATAGACAGTGGTCTTGCTGGTGGAATGATGGGATCGGCAGAAAATCATGAAGA TAACCAAATCGCCTATATCAAATCGTTAGGAGTCTATTTACAACTCACTGAGATTTATGGTTTAAATAAATCAATACAAA CTGATAATGGTTTGAAAGTAGATATTCACCAGGCTTTGTTATCACTTGAACTGATGATCGCTTTTTATAATAAAGATTAC ATTAAAGTATTTGCTGCTAATTTGCATAAAACAGGCGATTGGCAAGCGTCTTTAGGCCTGCTAGCGTTAAGTGGCTTAAT TGATCCGGTTAATATGCACAATAGATTCCCTATCACTTGGCAAAACTGGAAGAAAAAAGCGCAGAGTATAGTCGGATGGA CAGTCTCTGATACTTTCCCCAAAGGTAATATAAAAGCCGCAGAAGCTATCCTTGATTTTTGGTCCCTTGATTTTAAAAAA TGGTCCGCTCAACTAAAAACTAATAATCACGATAACCTGCCTCTGCTGACTGAAAGACCCATATTCAAAGTGGGTAATTA CAGTGTTCAATTACCCTGGATGATGGCAAGTCAGTTAACAGGTGTGAATGTCATTAATACGTTACGCCGTTTTGCCAATA AACGACCTGAGCTTAAAAGTGAAACTTCAAGAATCGAAACCAATCTGGGCAATCAATTTACAAAACGTGGCTTCACCGTT ATTGAAAGTTATCATCCCGAAAGGAAAGAAGGGTTTAACCCGGGTGAAATTGATTTAATTTGTGTGCTGGATAATAGTGT ATTAGTCCTTGAGGTTAAGTCGACCTATAGAAGAAACAGTAAAAGAGAAGCCATACGTTATAAACATGCAACATTAAGAA AGGCGGGCATGCAAATTAAGCATAAAACTGCTGCGGTTAAACAGCTGCTGCAAACTGATAGTCAATTTCAATCCCTGCTA GGGATTAAAGATCCTGATTTATATGAGGTAATAGGGTGGATAGCTGATACCAGCCTTGAGTATGATCATGAGTATTTTAA CGGTTATTTAAAGGTCTCAATTGAAGAATTACATATAGTGCTCGCTGATACTGCAGATTTTCTAGTAGATTATATTGAAT TAGCTCAAAACCAAGCGCCGTTAAAAGAAGATGATAACGAAAAAACAACACTATACCCGAGCGGATTTAGTGCAGCGGCT TTAGTCAATGTAATTGAACAAGCCAAGGTTTGGGCAGGTAGATAG
Upstream 100 bases:
>100_bases TCTGGCACGGATTTGTTTTAACTCTCATTTTTAAAATTGAATCCTCAGGTAAATAAATATTACCTTCATACTATGTAGAA CGAAGTAAAGGGATGAGCTC
Downstream 100 bases:
>100_bases AGTGTTCATTATTATTCAATAATTTTATGAAGTTGAGATTTTAATTTGGTCATCTCTGATTGTAAGGTAGCAAGCTCTTC TCTAAAAATGGCGCTGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MVNIIQEHTYFESMHESLIAQGYCFDDSAIETIEAYLSGKPVKSQKQKEVNKNKLFWSSAFLWDLSDQVLNSETFILALA RYFSVDNFSNVSLLEQITYKAPKAIRKGIRSSEIVLRANSGKWIEAQQLAERSPDELDELINICKAFQKVHKDCLELVAK YQTPFNALTVFELLSYSSVYAFKYLFDNPEALDGSMISTGERFHALKELVEWKLRIAEPNSFLLNDSVIGKSLKIHQAPL VFPSEEDSYIPDFYLYHFEKLMQAQVELDGFLSRSVMPFCFDDQCEYYLDGGRLEMHKNSDAGDQVWLLNGKKQSLIDGY WLNRGLQEFIDSGLAGGMMGSAENHEDNQIAYIKSLGVYLQLTEIYGLNKSIQTDNGLKVDIHQALLSLELMIAFYNKDY IKVFAANLHKTGDWQASLGLLALSGLIDPVNMHNRFPITWQNWKKKAQSIVGWTVSDTFPKGNIKAAEAILDFWSLDFKK WSAQLKTNNHDNLPLLTERPIFKVGNYSVQLPWMMASQLTGVNVINTLRRFANKRPELKSETSRIETNLGNQFTKRGFTV IESYHPERKEGFNPGEIDLICVLDNSVLVLEVKSTYRRNSKREAIRYKHATLRKAGMQIKHKTAAVKQLLQTDSQFQSLL GIKDPDLYEVIGWIADTSLEYDHEYFNGYLKVSIEELHIVLADTADFLVDYIELAQNQAPLKEDDNEKTTLYPSGFSAAA LVNVIEQAKVWAGR
Sequences:
>Translated_734_residues MVNIIQEHTYFESMHESLIAQGYCFDDSAIETIEAYLSGKPVKSQKQKEVNKNKLFWSSAFLWDLSDQVLNSETFILALA RYFSVDNFSNVSLLEQITYKAPKAIRKGIRSSEIVLRANSGKWIEAQQLAERSPDELDELINICKAFQKVHKDCLELVAK YQTPFNALTVFELLSYSSVYAFKYLFDNPEALDGSMISTGERFHALKELVEWKLRIAEPNSFLLNDSVIGKSLKIHQAPL VFPSEEDSYIPDFYLYHFEKLMQAQVELDGFLSRSVMPFCFDDQCEYYLDGGRLEMHKNSDAGDQVWLLNGKKQSLIDGY WLNRGLQEFIDSGLAGGMMGSAENHEDNQIAYIKSLGVYLQLTEIYGLNKSIQTDNGLKVDIHQALLSLELMIAFYNKDY IKVFAANLHKTGDWQASLGLLALSGLIDPVNMHNRFPITWQNWKKKAQSIVGWTVSDTFPKGNIKAAEAILDFWSLDFKK WSAQLKTNNHDNLPLLTERPIFKVGNYSVQLPWMMASQLTGVNVINTLRRFANKRPELKSETSRIETNLGNQFTKRGFTV IESYHPERKEGFNPGEIDLICVLDNSVLVLEVKSTYRRNSKREAIRYKHATLRKAGMQIKHKTAAVKQLLQTDSQFQSLL GIKDPDLYEVIGWIADTSLEYDHEYFNGYLKVSIEELHIVLADTADFLVDYIELAQNQAPLKEDDNEKTTLYPSGFSAAA LVNVIEQAKVWAGR >Mature_734_residues MVNIIQEHTYFESMHESLIAQGYCFDDSAIETIEAYLSGKPVKSQKQKEVNKNKLFWSSAFLWDLSDQVLNSETFILALA RYFSVDNFSNVSLLEQITYKAPKAIRKGIRSSEIVLRANSGKWIEAQQLAERSPDELDELINICKAFQKVHKDCLELVAK YQTPFNALTVFELLSYSSVYAFKYLFDNPEALDGSMISTGERFHALKELVEWKLRIAEPNSFLLNDSVIGKSLKIHQAPL VFPSEEDSYIPDFYLYHFEKLMQAQVELDGFLSRSVMPFCFDDQCEYYLDGGRLEMHKNSDAGDQVWLLNGKKQSLIDGY WLNRGLQEFIDSGLAGGMMGSAENHEDNQIAYIKSLGVYLQLTEIYGLNKSIQTDNGLKVDIHQALLSLELMIAFYNKDY IKVFAANLHKTGDWQASLGLLALSGLIDPVNMHNRFPITWQNWKKKAQSIVGWTVSDTFPKGNIKAAEAILDFWSLDFKK WSAQLKTNNHDNLPLLTERPIFKVGNYSVQLPWMMASQLTGVNVINTLRRFANKRPELKSETSRIETNLGNQFTKRGFTV IESYHPERKEGFNPGEIDLICVLDNSVLVLEVKSTYRRNSKREAIRYKHATLRKAGMQIKHKTAAVKQLLQTDSQFQSLL GIKDPDLYEVIGWIADTSLEYDHEYFNGYLKVSIEELHIVLADTADFLVDYIELAQNQAPLKEDDNEKTTLYPSGFSAAA LVNVIEQAKVWAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83780; Mature: 83780
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNIIQEHTYFESMHESLIAQGYCFDDSAIETIEAYLSGKPVKSQKQKEVNKNKLFWSSA CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEE FLWDLSDQVLNSETFILALARYFSVDNFSNVSLLEQITYKAPKAIRKGIRSSEIVLRANS EEECCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCEEEEEECC GKWIEAQQLAERSPDELDELINICKAFQKVHKDCLELVAKYQTPFNALTVFELLSYSSVY CCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AFKYLFDNPEALDGSMISTGERFHALKELVEWKLRIAEPNSFLLNDSVIGKSLKIHQAPL EEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHEEEECCCCEEECCHHCCCCEEEECCCE VFPSEEDSYIPDFYLYHFEKLMQAQVELDGFLSRSVMPFCFDDQCEYYLDGGRLEMHKNS ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCEEEEECCC DAGDQVWLLNGKKQSLIDGYWLNRGLQEFIDSGLAGGMMGSAENHEDNQIAYIKSLGVYL CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEE QLTEIYGLNKSIQTDNGLKVDIHQALLSLELMIAFYNKDYIKVFAANLHKTGDWQASLGL EEEHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCHHHHHH LALSGLIDPVNMHNRFPITWQNWKKKAQSIVGWTVSDTFPKGNIKAAEAILDFWSLDFKK HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHH WSAQLKTNNHDNLPLLTERPIFKVGNYSVQLPWMMASQLTGVNVINTLRRFANKRPELKS HHHHHCCCCCCCCCEEECCCEEEECCEEEEECHHHHHHCCCHHHHHHHHHHHCCCCCCHH ETSRIETNLGNQFTKRGFTVIESYHPERKEGFNPGEIDLICVLDNSVLVLEVKSTYRRNS HHHHHHHHCCHHHHHCCCHHHHHCCCHHHCCCCCCCEEEEEEECCCEEEEEEHHHHCCCC KREAIRYKHATLRKAGMQIKHKTAAVKQLLQTDSQFQSLLGIKDPDLYEVIGWIADTSLE HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCCC YDHEYFNGYLKVSIEELHIVLADTADFLVDYIELAQNQAPLKEDDNEKTTLYPSGFSAAA CCHHHCCCEEEEEEEHEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHH LVNVIEQAKVWAGR HHHHHHHHHHCCCC >Mature Secondary Structure MVNIIQEHTYFESMHESLIAQGYCFDDSAIETIEAYLSGKPVKSQKQKEVNKNKLFWSSA CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEE FLWDLSDQVLNSETFILALARYFSVDNFSNVSLLEQITYKAPKAIRKGIRSSEIVLRANS EEECCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCEEEEEECC GKWIEAQQLAERSPDELDELINICKAFQKVHKDCLELVAKYQTPFNALTVFELLSYSSVY CCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AFKYLFDNPEALDGSMISTGERFHALKELVEWKLRIAEPNSFLLNDSVIGKSLKIHQAPL EEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHEEEECCCCEEECCHHCCCCEEEECCCE VFPSEEDSYIPDFYLYHFEKLMQAQVELDGFLSRSVMPFCFDDQCEYYLDGGRLEMHKNS ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCEEEEECCC DAGDQVWLLNGKKQSLIDGYWLNRGLQEFIDSGLAGGMMGSAENHEDNQIAYIKSLGVYL CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEE QLTEIYGLNKSIQTDNGLKVDIHQALLSLELMIAFYNKDYIKVFAANLHKTGDWQASLGL EEEHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCHHHHHH LALSGLIDPVNMHNRFPITWQNWKKKAQSIVGWTVSDTFPKGNIKAAEAILDFWSLDFKK HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHH WSAQLKTNNHDNLPLLTERPIFKVGNYSVQLPWMMASQLTGVNVINTLRRFANKRPELKS HHHHHCCCCCCCCCEEECCCEEEECCEEEEECHHHHHHCCCHHHHHHHHHHHCCCCCCHH ETSRIETNLGNQFTKRGFTVIESYHPERKEGFNPGEIDLICVLDNSVLVLEVKSTYRRNS HHHHHHHHCCHHHHHCCCHHHHHCCCHHHCCCCCCCEEEEEEECCCEEEEEEHHHHCCCC KREAIRYKHATLRKAGMQIKHKTAAVKQLLQTDSQFQSLLGIKDPDLYEVIGWIADTSLE HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCCC YDHEYFNGYLKVSIEELHIVLADTADFLVDYIELAQNQAPLKEDDNEKTTLYPSGFSAAA CCHHHCCCEEEEEEEHEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHH LVNVIEQAKVWAGR HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA