| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946161
Identifier: 119946161
GI number: 119946161
Start: 3080401
End: 3080880
Strand: Reverse
Name: 119946161
Synonym: Ping_2521
Alternate gene names: NA
Gene position: 3080880-3080401 (Counterclockwise)
Preceding gene: 119946162
Following gene: 119946159
Centisome position: 67.57
GC content: 32.08
Gene sequence:
>480_bases ATGGACCCAGTATCAACTTTTCTTGCGGCTATGATTTCAGCTGCAACAACAAATGTTAAACAGAATGTTTCAGATATTTA CGGATCAGAAATTAAGACTGAAATAATTGACTATCAAGGGATGAAAATTCCATTTCAATATCAGTTGTGGAAGATAAAAA GTAAGTCAGTGTGCTCTAGTTATAGCCAGAGAATGGAAGTTTATTCTCAGTGCTCTGTAAAAGAAAAATCTCTTTTTAGA GATATTTGTGAAGAGTTATCCAGCCACGATCTATCTCATTGGAAGGTAAAAAAAGTGCAGAATATGTATTGTAATGCAGC AATTGATTACAAACCTGTTATTGCTTCTATATCAAATTCTAAAGAGGTAACAGAGACGCGAGAAAAAGAAAAACAATGTA ATTTGTTAATTTTAAAAGCAATGGGAAATAATAATGCAGAACTTATTGCTGAAAGAGATTTAGTTTGTGGGAAAAAGTAA
Upstream 100 bases:
>100_bases AACATATTGTGATGATGAGTTAAAGCAAGAAGGCTGTATATATGTTTCAGTACATGATGATAGCTATTACGAGTTCGGTT AATAGGAATAAGGATATTTA
Downstream 100 bases:
>100_bases TAATTAGTTCTTATTTGAATTAGGGGAATACTTCAACAATCCAAAATGGTATCTGTATTTATCACCTTTTCCTGCATTGC GTTTTCCATTGTTATCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MDPVSTFLAAMISAATTNVKQNVSDIYGSEIKTEIIDYQGMKIPFQYQLWKIKSKSVCSSYSQRMEVYSQCSVKEKSLFR DICEELSSHDLSHWKVKKVQNMYCNAAIDYKPVIASISNSKEVTETREKEKQCNLLILKAMGNNNAELIAERDLVCGKK
Sequences:
>Translated_159_residues MDPVSTFLAAMISAATTNVKQNVSDIYGSEIKTEIIDYQGMKIPFQYQLWKIKSKSVCSSYSQRMEVYSQCSVKEKSLFR DICEELSSHDLSHWKVKKVQNMYCNAAIDYKPVIASISNSKEVTETREKEKQCNLLILKAMGNNNAELIAERDLVCGKK >Mature_159_residues MDPVSTFLAAMISAATTNVKQNVSDIYGSEIKTEIIDYQGMKIPFQYQLWKIKSKSVCSSYSQRMEVYSQCSVKEKSLFR DICEELSSHDLSHWKVKKVQNMYCNAAIDYKPVIASISNSKEVTETREKEKQCNLLILKAMGNNNAELIAERDLVCGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18091; Mature: 18091
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPVSTFLAAMISAATTNVKQNVSDIYGSEIKTEIIDYQGMKIPFQYQLWKIKSKSVCSS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEHEEECCHHHHHHH YSQRMEVYSQCSVKEKSLFRDICEELSSHDLSHWKVKKVQNMYCNAAIDYKPVIASISNS HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCC KEVTETREKEKQCNLLILKAMGNNNAELIAERDLVCGKK HHHHHHHHHHHHCCEEEEEECCCCCHHEEECCCCCCCCC >Mature Secondary Structure MDPVSTFLAAMISAATTNVKQNVSDIYGSEIKTEIIDYQGMKIPFQYQLWKIKSKSVCSS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEHEEECCHHHHHHH YSQRMEVYSQCSVKEKSLFRDICEELSSHDLSHWKVKKVQNMYCNAAIDYKPVIASISNS HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCC KEVTETREKEKQCNLLILKAMGNNNAELIAERDLVCGKK HHHHHHHHHHHHCCEEEEEECCCCCHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA