| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946116
Identifier: 119946116
GI number: 119946116
Start: 3017845
End: 3018372
Strand: Reverse
Name: 119946116
Synonym: Ping_2466
Alternate gene names: NA
Gene position: 3018372-3017845 (Counterclockwise)
Preceding gene: 119946117
Following gene: 119946114
Centisome position: 66.2
GC content: 37.69
Gene sequence:
>528_bases ATGTTTATAAAACTTAGTCCTTCTAACACTGTTCTTCCATTAACTTTTGAAGATGACCTTAACACTCAACAAGAAGCAGA GTTGCTAGCCCAATGCCCAACCATAGACCTCACACAAGTGAGTAGTAAAGAACAAGTGACTCAACATTTGATTGACTTAT TTGCCTATTACTTTCAGCTTCCTACTGAGCTTATCAATGAACAAAGTGACATTGTTAATGATATTGAAAGGTATGTCTGG GCAAGAGATCTAGGCGTAACTTTTGAAGATGTCACCTATGGCCGAATATTTTGTGGCAATGATAACGAAGGAAATCTCAC TGGGGGTATAGAAGACCGTGGAATAATGATCGCAACCATGTACATGACCGATTTCCCTGATCTAATTGGAATAAAAGTCA TTGATGACCGACAAAATGCTACATTTGAAGCTGAGGACGACGAGTTTGGCAGTTATTATGATTGTAATACTGTTAATGAA TTATCCACACTAGTGTTTTCTGTATGTAAAAAGCTCAATGCCGCATAA
Upstream 100 bases:
>100_bases AGAGTTAAAAGAGGAAATTCAAGTGGCTATGAGTACGCGGATCTAACTTATAGAATGTCTTTTACATTTTCACGAAAAAT TTGCATAGCGGAATAAAAAC
Downstream 100 bases:
>100_bases ATCCAGCCGGTAACATTATTTTAAGACGCAGAATGAATTTTAGTAAAATCGCAATATCACCATCCCCAGCATCGCCATCA ACAGCGAATAAAGGTACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MFIKLSPSNTVLPLTFEDDLNTQQEAELLAQCPTIDLTQVSSKEQVTQHLIDLFAYYFQLPTELINEQSDIVNDIERYVW ARDLGVTFEDVTYGRIFCGNDNEGNLTGGIEDRGIMIATMYMTDFPDLIGIKVIDDRQNATFEAEDDEFGSYYDCNTVNE LSTLVFSVCKKLNAA
Sequences:
>Translated_175_residues MFIKLSPSNTVLPLTFEDDLNTQQEAELLAQCPTIDLTQVSSKEQVTQHLIDLFAYYFQLPTELINEQSDIVNDIERYVW ARDLGVTFEDVTYGRIFCGNDNEGNLTGGIEDRGIMIATMYMTDFPDLIGIKVIDDRQNATFEAEDDEFGSYYDCNTVNE LSTLVFSVCKKLNAA >Mature_175_residues MFIKLSPSNTVLPLTFEDDLNTQQEAELLAQCPTIDLTQVSSKEQVTQHLIDLFAYYFQLPTELINEQSDIVNDIERYVW ARDLGVTFEDVTYGRIFCGNDNEGNLTGGIEDRGIMIATMYMTDFPDLIGIKVIDDRQNATFEAEDDEFGSYYDCNTVNE LSTLVFSVCKKLNAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19824; Mature: 19824
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIKLSPSNTVLPLTFEDDLNTQQEAELLAQCPTIDLTQVSSKEQVTQHLIDLFAYYFQL CEEEECCCCEEEEEEECCCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHC PTELINEQSDIVNDIERYVWARDLGVTFEDVTYGRIFCGNDNEGNLTGGIEDRGIMIATM CHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCEECCCCCCCEEEEEE YMTDFPDLIGIKVIDDRQNATFEAEDDEFGSYYDCNTVNELSTLVFSVCKKLNAA EECCCCCHHEEEEEECCCCCEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFIKLSPSNTVLPLTFEDDLNTQQEAELLAQCPTIDLTQVSSKEQVTQHLIDLFAYYFQL CEEEECCCCEEEEEEECCCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHC PTELINEQSDIVNDIERYVWARDLGVTFEDVTYGRIFCGNDNEGNLTGGIEDRGIMIATM CHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCEECCCCCCCEEEEEE YMTDFPDLIGIKVIDDRQNATFEAEDDEFGSYYDCNTVNELSTLVFSVCKKLNAA EECCCCCHHEEEEEECCCCCEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA