| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ppk [H]
Identifier: 119946065
GI number: 119946065
Start: 2958260
End: 2960428
Strand: Reverse
Name: ppk [H]
Synonym: Ping_2414
Alternate gene names: 119946065
Gene position: 2960428-2958260 (Counterclockwise)
Preceding gene: 119946066
Following gene: 119946064
Centisome position: 64.93
GC content: 39.51
Gene sequence:
>2169_bases ATGCTTTACAATCAAATAGTTAAGGGCCTGATTAAGAATATGAGTACTGAAAAATTCTATATCGAAAAAGAACTTAGTTG GCTTTCGTTTAATGAGCGAGTGCTTCAAGAAGCCGCTGATAAGAGCGTGCCTTTAATTGAAAGAATTCGCTTTCTGGGCA TTTTTTCTAATAATTTAGATGAATTTTATAAAGTTCGTTTTGCCGATGTGAAGCGCCGTATATTAATCGACCAGGAGCAT GCCTGGAACGAACCTTCCTTGAACACCCATGGACTTAAGTTTAATAAACAATTATTGTCCAATATGCAAACCAAAGTATT TCAGCTGAATGAACGATTTGACGTGCTTTATAATGAGCTAATCCGTGAAATGGCAAGACGACGGATTTTTTTAGTCAGCG AGCTTCAACTCGATGAAGCACAACAAAACTGGATTAGAAAATACTTTAAAAAAGAAGTGATGCCGCACATCACCCCCTTA TTACTAAATGATGATATTGATCTTCTGCAGTTTCTTAATGATACCGATGCCTACATTGTTGTTGAACTAAAAAAAGATAA CCATTCTCAATATGCATTGCTGGAAATACCCACCGGGTATTTACCGCGCTTTGTTAGGGTACCGGAGCAGAAAGGCAGGG GGCGTAAAACCATTATCCTCCTTGATAACATTGTTCGTTATTGTCTGGATGAACTTTTTCGGGGATTTTTTGACTACGAC GAGCTTAACGGTTATGCCATGAAAATGACACGCGATGCCGAGTACGATTTAAGCCATGAAGTTGAATACAGTGTTTTGGA TAAAATGTCTGAAGGGGTCAGCCAACGTTTAACCGCGATGGCGGTACGCTTCGTTTATGAGCGTGAGATGCCGCAAGCCA TGCTCGATTTTTTATGTGAAAAATTAAAAATATCCAACTATGACAGCCTGCTTCCCGGTGGTCGTTATTATAATTTCAAG GACTTTATCAGCTTTCCAAATATTGGCCCTAACTACCTGGAAAATAAATCTCTTACACCGATAGAGTGTGCTGACTTTGA AGGTTATGTAAACTATTTTGATGCCATTCGTGCAAAAGATATCTTAGTTTATTATCCATACCATACTTTTAGTCATATCG CGGAGCTGGTGCGTCAAGCCTCATTTGATCCCAAAGTGCTCAGTATTAAAATAAATATTTACCGTGTGGCGAAACATTCA CAGTTAATGAATTCTCTGATCGACGCCGTCCATAACGGTAAAAATGTGACTGTGGTAGTCGAGTTGCAGGCGCGTTTTGA TGAAGAAGCTAATATCGAATGGGCTAAAGTGCTGACTGAAGCGGGCGTTCATGTTGTTTTTGGTTCTTCAGGGCTTAAAA TTCACTCTAAACTACTGCTGATTAGCCGTCGTGAAAAAGAGGCGGTGATTTATTATGCGCATATAGGCACAGGCAACTTT CACGAAAAAACCGCGCGTATCTATACTGATTTTTCTCTGTTAACCGCGGTTCAAGAGATTGCTTTAGAAGTGCGCAAAGT GTTTAGCTATATCGAGAATCCCTATCGTCCAGTGCGTTTTAACCACCTTATTGTTTCACCACGCAATTCGCGTAAACGGA TCTATCAAGTGATAGATCAAGAAATCGCTAATGCAGCTCTTGGAAAAAACGCCGGATTGACACTCAAGGTGAATAATCTT GTGGATAAAGGGCTTATCAATAAACTCTATAATGCAAGCAGGGCGGGTGTACAGATTCAAATGGTCATTCGGGGCATGTG CTCTTTAGTACCCGGTATTAAAGACGTCAGTGAAAATATAAAAATCATTAGCATTATCGACCGATTTTTGGAACATTCAA GGGTGTTAATTACACATAACGATGGCGATCCGCAAGTTTATATCTCCTCGGCTGACTGGATGACCAGAAATATCGACAAT AGAATCGAAGTGACTGTTCCAATCCGTGATCCCCGTTTAAAACAACGTATTATTGATATTGTTAATATTCATTTTACTGA TACAGTAAAAGCGCGTTTGATGGATCAAAATATGAGCAATGATTATGTACCGCGAGGAAACCGCAAAAAAATTCGCTCAC AGCTCGATATTTATGAATACCTTAAAAACACCGAAAAACAAACTAGAAAACAACAAAAGCAGAGCCGAGATAATGTCGCA ATCCGTTGA
Upstream 100 bases:
>100_bases TTGTAAAACAGTACTCTATAAAAAATCTGGGCCTGATAAGTCGGTTATGACATAAAAATGTAACATAAATGACATATAAT ACTATATCATAATAATATTG
Downstream 100 bases:
>100_bases ACAAAAAGTACGCAATATAGCCGCTATTGACTTGGGATCAAACAGCTTCCACATGGTAGTCGCAAAAGTGGTGGGGCAGG ATCTCCAGATGGTCAGTCGC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MLYNQIVKGLIKNMSTEKFYIEKELSWLSFNERVLQEAADKSVPLIERIRFLGIFSNNLDEFYKVRFADVKRRILIDQEH AWNEPSLNTHGLKFNKQLLSNMQTKVFQLNERFDVLYNELIREMARRRIFLVSELQLDEAQQNWIRKYFKKEVMPHITPL LLNDDIDLLQFLNDTDAYIVVELKKDNHSQYALLEIPTGYLPRFVRVPEQKGRGRKTIILLDNIVRYCLDELFRGFFDYD ELNGYAMKMTRDAEYDLSHEVEYSVLDKMSEGVSQRLTAMAVRFVYEREMPQAMLDFLCEKLKISNYDSLLPGGRYYNFK DFISFPNIGPNYLENKSLTPIECADFEGYVNYFDAIRAKDILVYYPYHTFSHIAELVRQASFDPKVLSIKINIYRVAKHS QLMNSLIDAVHNGKNVTVVVELQARFDEEANIEWAKVLTEAGVHVVFGSSGLKIHSKLLLISRREKEAVIYYAHIGTGNF HEKTARIYTDFSLLTAVQEIALEVRKVFSYIENPYRPVRFNHLIVSPRNSRKRIYQVIDQEIANAALGKNAGLTLKVNNL VDKGLINKLYNASRAGVQIQMVIRGMCSLVPGIKDVSENIKIISIIDRFLEHSRVLITHNDGDPQVYISSADWMTRNIDN RIEVTVPIRDPRLKQRIIDIVNIHFTDTVKARLMDQNMSNDYVPRGNRKKIRSQLDIYEYLKNTEKQTRKQQKQSRDNVA IR
Sequences:
>Translated_722_residues MLYNQIVKGLIKNMSTEKFYIEKELSWLSFNERVLQEAADKSVPLIERIRFLGIFSNNLDEFYKVRFADVKRRILIDQEH AWNEPSLNTHGLKFNKQLLSNMQTKVFQLNERFDVLYNELIREMARRRIFLVSELQLDEAQQNWIRKYFKKEVMPHITPL LLNDDIDLLQFLNDTDAYIVVELKKDNHSQYALLEIPTGYLPRFVRVPEQKGRGRKTIILLDNIVRYCLDELFRGFFDYD ELNGYAMKMTRDAEYDLSHEVEYSVLDKMSEGVSQRLTAMAVRFVYEREMPQAMLDFLCEKLKISNYDSLLPGGRYYNFK DFISFPNIGPNYLENKSLTPIECADFEGYVNYFDAIRAKDILVYYPYHTFSHIAELVRQASFDPKVLSIKINIYRVAKHS QLMNSLIDAVHNGKNVTVVVELQARFDEEANIEWAKVLTEAGVHVVFGSSGLKIHSKLLLISRREKEAVIYYAHIGTGNF HEKTARIYTDFSLLTAVQEIALEVRKVFSYIENPYRPVRFNHLIVSPRNSRKRIYQVIDQEIANAALGKNAGLTLKVNNL VDKGLINKLYNASRAGVQIQMVIRGMCSLVPGIKDVSENIKIISIIDRFLEHSRVLITHNDGDPQVYISSADWMTRNIDN RIEVTVPIRDPRLKQRIIDIVNIHFTDTVKARLMDQNMSNDYVPRGNRKKIRSQLDIYEYLKNTEKQTRKQQKQSRDNVA IR >Mature_722_residues MLYNQIVKGLIKNMSTEKFYIEKELSWLSFNERVLQEAADKSVPLIERIRFLGIFSNNLDEFYKVRFADVKRRILIDQEH AWNEPSLNTHGLKFNKQLLSNMQTKVFQLNERFDVLYNELIREMARRRIFLVSELQLDEAQQNWIRKYFKKEVMPHITPL LLNDDIDLLQFLNDTDAYIVVELKKDNHSQYALLEIPTGYLPRFVRVPEQKGRGRKTIILLDNIVRYCLDELFRGFFDYD ELNGYAMKMTRDAEYDLSHEVEYSVLDKMSEGVSQRLTAMAVRFVYEREMPQAMLDFLCEKLKISNYDSLLPGGRYYNFK DFISFPNIGPNYLENKSLTPIECADFEGYVNYFDAIRAKDILVYYPYHTFSHIAELVRQASFDPKVLSIKINIYRVAKHS QLMNSLIDAVHNGKNVTVVVELQARFDEEANIEWAKVLTEAGVHVVFGSSGLKIHSKLLLISRREKEAVIYYAHIGTGNF HEKTARIYTDFSLLTAVQEIALEVRKVFSYIENPYRPVRFNHLIVSPRNSRKRIYQVIDQEIANAALGKNAGLTLKVNNL VDKGLINKLYNASRAGVQIQMVIRGMCSLVPGIKDVSENIKIISIIDRFLEHSRVLITHNDGDPQVYISSADWMTRNIDN RIEVTVPIRDPRLKQRIIDIVNIHFTDTVKARLMDQNMSNDYVPRGNRKKIRSQLDIYEYLKNTEKQTRKQQKQSRDNVA IR
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PLD phosphodiesterase domain [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=695, Percent_Identity=62.3021582733813, Blast_Score=906, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 - InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 84382; Mature: 84382
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYNQIVKGLIKNMSTEKFYIEKELSWLSFNERVLQEAADKSVPLIERIRFLGIFSNNLD CCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH EFYKVRFADVKRRILIDQEHAWNEPSLNTHGLKFNKQLLSNMQTKVFQLNERFDVLYNEL HHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IREMARRRIFLVSELQLDEAQQNWIRKYFKKEVMPHITPLLLNDDIDLLQFLNDTDAYIV HHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCEEE VELKKDNHSQYALLEIPTGYLPRFVRVPEQKGRGRKTIILLDNIVRYCLDELFRGFFDYD EEEECCCCCCEEEEECCCCCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHH ELNGYAMKMTRDAEYDLSHEVEYSVLDKMSEGVSQRLTAMAVRFVYEREMPQAMLDFLCE HCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KLKISNYDSLLPGGRYYNFKDFISFPNIGPNYLENKSLTPIECADFEGYVNYFDAIRAKD HHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCC ILVYYPYHTFSHIAELVRQASFDPKVLSIKINIYRVAKHSQLMNSLIDAVHNGKNVTVVV EEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEE ELQARFDEEANIEWAKVLTEAGVHVVFGSSGLKIHSKLLLISRREKEAVIYYAHIGTGNF EEEECCCCCCCCHHHHHHHHCCEEEEECCCCCEEEHEEEEEECCCCCEEEEEEEECCCCC HEKTARIYTDFSLLTAVQEIALEVRKVFSYIENPYRPVRFNHLIVSPRNSRKRIYQVIDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHH EIANAALGKNAGLTLKVNNLVDKGLINKLYNASRAGVQIQMVIRGMCSLVPGIKDVSENI HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCHHHHHCCC KIISIIDRFLEHSRVLITHNDGDPQVYISSADWMTRNIDNRIEVTVPIRDPRLKQRIIDI HHHHHHHHHHHCCEEEEEECCCCCEEEEECCCHHHCCCCCEEEEEEECCCHHHHHHHHHH VNIHFTDTVKARLMDQNMSNDYVPRGNRKKIRSQLDIYEYLKNTEKQTRKQQKQSRDNVA HEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IR CC >Mature Secondary Structure MLYNQIVKGLIKNMSTEKFYIEKELSWLSFNERVLQEAADKSVPLIERIRFLGIFSNNLD CCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH EFYKVRFADVKRRILIDQEHAWNEPSLNTHGLKFNKQLLSNMQTKVFQLNERFDVLYNEL HHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IREMARRRIFLVSELQLDEAQQNWIRKYFKKEVMPHITPLLLNDDIDLLQFLNDTDAYIV HHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCEEE VELKKDNHSQYALLEIPTGYLPRFVRVPEQKGRGRKTIILLDNIVRYCLDELFRGFFDYD EEEECCCCCCEEEEECCCCCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHH ELNGYAMKMTRDAEYDLSHEVEYSVLDKMSEGVSQRLTAMAVRFVYEREMPQAMLDFLCE HCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KLKISNYDSLLPGGRYYNFKDFISFPNIGPNYLENKSLTPIECADFEGYVNYFDAIRAKD HHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCC ILVYYPYHTFSHIAELVRQASFDPKVLSIKINIYRVAKHSQLMNSLIDAVHNGKNVTVVV EEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEE ELQARFDEEANIEWAKVLTEAGVHVVFGSSGLKIHSKLLLISRREKEAVIYYAHIGTGNF EEEECCCCCCCCHHHHHHHHCCEEEEECCCCCEEEHEEEEEECCCCCEEEEEEEECCCCC HEKTARIYTDFSLLTAVQEIALEVRKVFSYIENPYRPVRFNHLIVSPRNSRKRIYQVIDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHH EIANAALGKNAGLTLKVNNLVDKGLINKLYNASRAGVQIQMVIRGMCSLVPGIKDVSENI HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCHHHHHCCC KIISIIDRFLEHSRVLITHNDGDPQVYISSADWMTRNIDNRIEVTVPIRDPRLKQRIIDI HHHHHHHHHHHCCEEEEEECCCCCEEEEECCCHHHCCCCCEEEEEEECCCHHHHHHHHHH VNIHFTDTVKARLMDQNMSNDYVPRGNRKKIRSQLDIYEYLKNTEKQTRKQQKQSRDNVA HEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]