| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is pstS [H]
Identifier: 119946060
GI number: 119946060
Start: 2951224
End: 2952276
Strand: Reverse
Name: pstS [H]
Synonym: Ping_2409
Alternate gene names: 119946060
Gene position: 2952276-2951224 (Counterclockwise)
Preceding gene: 119946062
Following gene: 119946059
Centisome position: 64.75
GC content: 41.12
Gene sequence:
>1053_bases ATGAAAAAATTAGTATTAAACACGGTAGCACTAACATTTACAGTTTCATTATTAGCATCAGCGGCTGCAACAGCTGCAAG TCGAGATATGATTAGCGTCGTTGGTTCTTCAACTGTTTACCCTTTTTCAACCGTAGTGGCAGAACGTTTTGGGAAAAAAA CGCAATTTAATACACCTAAAATAGAGTCAACAGGGACAGGTGGCGGCATGAAATTATTCTGCGCCGGCAATGGTATTGAT ACTCCGGATATGTCTAACGCATCACGCCGCATGAAAAAAAGTGAATATGAGATGTGCGTTGAAAATGGCGTAACAGATAT CACTGAAGTACTGATCGGTTATGACGGTATTGTTGTTGCTAACTCTAATGCTGCACCGCAGATGAAACTCAGCCGTAAAG ATCTGTTTTTAGCCTTAGCCAAGGAAGTGCCGGCACTTGACGGTAGCGAAACATTAATAAAGAACCCGTATAAAACATGG AAAGATGTTAACCCGAGTCTACCCGCAACTAAAATCGAAGTACTGGGGCCACCGCCAACATCAGGTACACGAGATGCCTT TGCAGAATTAGTTATGGAAGGGGGTTGTAAGCAGTACCCGTGGATTAAAGCTATCAAGAAAACAGATAAAAGTGCTTACA AAACGATTTGTCACTCGGTCCGTGAAGATCATGCTTATATTGAAGCCGGTGAAAATGATAATTTAATTATTCAAAAGATA GATGCTAATCCTGACGCAATGGGAATATTTGGCTTTAGCTTCCTTGATCAAAATACAGATAAAATTCAAGGTTCATTTAT CGACGGTACTGCACCTTCATTCGATGCGATTGCCGACGGTAGTTACCCTGTTTCACGTCCACTTTTCTTCTACGTGAAAA ATTCTCATGTTGATAAAGTACCGGGCATTGCCGAGTATTTAGCTGAATTTACCAGCGAATCAGCAATGGGGCAAATGGGC TATTTAACAGATAAAGGCTTAATACCACTTGGCGATGAAAAGTTTGCTGAAGTGAGTGCGGATGTGAAGTCCTATAAAGC GTTACAACTGTAA
Upstream 100 bases:
>100_bases AACTTCAAAATCACTGTCATTAAATTGTCACAAACCTGTAATGAACTTGTAATGGTATGGGCTGATAATCATCACATCGT CATACATAAGGAAATTAAAA
Downstream 100 bases:
>100_bases TATCAGTCTGCTCTATTAACTGATAATACTTAAAATGAAGGTAGCCCAATCATGGTCTACCTTTTTACTTTAAAGGCCAC TGTATGACCTCAACAGCTTT
Product: ABC phosphate transporter eriplasmic phosphate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKKLVLNTVALTFTVSLLASAAATAASRDMISVVGSSTVYPFSTVVAERFGKKTQFNTPKIESTGTGGGMKLFCAGNGID TPDMSNASRRMKKSEYEMCVENGVTDITEVLIGYDGIVVANSNAAPQMKLSRKDLFLALAKEVPALDGSETLIKNPYKTW KDVNPSLPATKIEVLGPPPTSGTRDAFAELVMEGGCKQYPWIKAIKKTDKSAYKTICHSVREDHAYIEAGENDNLIIQKI DANPDAMGIFGFSFLDQNTDKIQGSFIDGTAPSFDAIADGSYPVSRPLFFYVKNSHVDKVPGIAEYLAEFTSESAMGQMG YLTDKGLIPLGDEKFAEVSADVKSYKALQL
Sequences:
>Translated_350_residues MKKLVLNTVALTFTVSLLASAAATAASRDMISVVGSSTVYPFSTVVAERFGKKTQFNTPKIESTGTGGGMKLFCAGNGID TPDMSNASRRMKKSEYEMCVENGVTDITEVLIGYDGIVVANSNAAPQMKLSRKDLFLALAKEVPALDGSETLIKNPYKTW KDVNPSLPATKIEVLGPPPTSGTRDAFAELVMEGGCKQYPWIKAIKKTDKSAYKTICHSVREDHAYIEAGENDNLIIQKI DANPDAMGIFGFSFLDQNTDKIQGSFIDGTAPSFDAIADGSYPVSRPLFFYVKNSHVDKVPGIAEYLAEFTSESAMGQMG YLTDKGLIPLGDEKFAEVSADVKSYKALQL >Mature_350_residues MKKLVLNTVALTFTVSLLASAAATAASRDMISVVGSSTVYPFSTVVAERFGKKTQFNTPKIESTGTGGGMKLFCAGNGID TPDMSNASRRMKKSEYEMCVENGVTDITEVLIGYDGIVVANSNAAPQMKLSRKDLFLALAKEVPALDGSETLIKNPYKTW KDVNPSLPATKIEVLGPPPTSGTRDAFAELVMEGGCKQYPWIKAIKKTDKSAYKTICHSVREDHAYIEAGENDNLIIQKI DANPDAMGIFGFSFLDQNTDKIQGSFIDGTAPSFDAIADGSYPVSRPLFFYVKNSHVDKVPGIAEYLAEFTSESAMGQMG YLTDKGLIPLGDEKFAEVSADVKSYKALQL
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37814; Mature: 37814
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVLNTVALTFTVSLLASAAATAASRDMISVVGSSTVYPFSTVVAERFGKKTQFNTPK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC IESTGTGGGMKLFCAGNGIDTPDMSNASRRMKKSEYEMCVENGVTDITEVLIGYDGIVVA CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEE NSNAAPQMKLSRKDLFLALAKEVPALDGSETLIKNPYKTWKDVNPSLPATKIEVLGPPPT CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHCCCCCCCCCEEEEECCCCC SGTRDAFAELVMEGGCKQYPWIKAIKKTDKSAYKTICHSVREDHAYIEAGENDNLIIQKI CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEE DANPDAMGIFGFSFLDQNTDKIQGSFIDGTAPSFDAIADGSYPVSRPLFFYVKNSHVDKV CCCCCCEEEEEHHHHCCCCHHHCCEEECCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCC PGIAEYLAEFTSESAMGQMGYLTDKGLIPLGDEKFAEVSADVKSYKALQL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLVLNTVALTFTVSLLASAAATAASRDMISVVGSSTVYPFSTVVAERFGKKTQFNTPK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC IESTGTGGGMKLFCAGNGIDTPDMSNASRRMKKSEYEMCVENGVTDITEVLIGYDGIVVA CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEE NSNAAPQMKLSRKDLFLALAKEVPALDGSETLIKNPYKTWKDVNPSLPATKIEVLGPPPT CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHCCCCCCCCCEEEEECCCCC SGTRDAFAELVMEGGCKQYPWIKAIKKTDKSAYKTICHSVREDHAYIEAGENDNLIIQKI CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEE DANPDAMGIFGFSFLDQNTDKIQGSFIDGTAPSFDAIADGSYPVSRPLFFYVKNSHVDKV CCCCCCEEEEEHHHHCCCCHHHCCEEECCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCC PGIAEYLAEFTSESAMGQMGYLTDKGLIPLGDEKFAEVSADVKSYKALQL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA