| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yqgH [H]
Identifier: 119946059
GI number: 119946059
Start: 2949734
End: 2951140
Strand: Reverse
Name: yqgH [H]
Synonym: Ping_2408
Alternate gene names: 119946059
Gene position: 2951140-2949734 (Counterclockwise)
Preceding gene: 119946060
Following gene: 119946058
Centisome position: 64.72
GC content: 43.57
Gene sequence:
>1407_bases ATGACCTCAACAGCTTTAATTTTAATCATAACGCTACTTACACTCGGAAGTTATTGGTACGGAATGCAACGCTCGATTAA GGTTGCAGGCGGCGTTAGTCAGATTAAAAACATGCACTCTTTGCCACAGCAATTTGGTTTGCTGACTGCATTTTGCTGCG GTTTACCCGCGTTATTTCTTCTCTTATTATGGGGGATAGTTGAACCCATTATTATCGAATCACTGCTAGTTAACTCTCTG GGTAAGTCGGTACAGGCATTATCCACTGCAGATTTGAGTTTATATCTTAATGATATCCGTATTATGGCGGGTTCTGCCCT AAGCGACCTATCAAATCTCAGCGATTTATCAAATGAGGTTGTAAAACAGCAGGCGGCACTGTATTTACGGGTGTTAAAAG ACCAGGCTAGTATGTTAAAAGCCGGCTTAATACTGATCACTGCACTCGCGAGTGTGATGTTCATTGTTAGTCGCTTCAAG TTAAGCTTTTCTGCTCGTGCATTATCTGAGAGTGTCACTAAATTCTTGTTTTTAAGCTGCTCAATTGTTGCCATTTTTAC CACCTTAGGCATTTTGATGTCAGTGTTGTTTGAATCACTGAAATTTTTTCAATCGGTGTCAACCTTAGATTTTTTATTCG GAACCACCTGGAGTCCGCAAATAGCGATGCGTAGCGAGCAGGTTGGATCATCGGGTGCTTTTGGCGCTGTACCTTTATTT GCAGGTACTATGCTGATCTCGTTTATTGCCATGACGATTGCGGCACCGGTTGGATTGTTGACTGCAATCTATTTATCACA ATATGCGAGTCCTACTTTGCGAACCGTTGCTAAACCTATGTTAGAAATACTGGCGGGTATCCCAACGGTCGTCTATGGAT TTTTTGCGGCACTGACGGTGGCCCCGTTTATTCGTGATACGGGTGAAGCACTGGGGTTAAATGTGGCTTCAGAAAGTGCG TTAGCCGCAGGAATAGTGATGGGTGTGATGATTATTCCCTTTGTTTCTTCTCTTTCCGATGATGCGCTTAATGCCGTGCC ACAGGCATTAAAAGAAGGTTCTCTTGCGATGGGGGCAACGGAATCTGAGACCATTAAAAACGTATTATTACCCGCGGCGT TACCGGGCATTATCGGTGCCATGCTATTGGCTGTTTCCCGTGCTATTGGTGAAACCATGATAGTTGTTATGGCGGCGGGG ATGGCCGCAAATTTAACCGCTAATCCGCTGGCTGCGGTGACCACAGTAACGGTACAAATTGTAACGTTACTAACGGGCGA TCAGGAATTTGACAGCCCTAAAACATTAGCCGCCTTTGCGTTAGGTTTAATGCTGTTTGTTACAACATTATTACTTAATG TGATTGCTTTGAAAGTAGTCAGAAAATACAGAGAACAATATGACTAA
Upstream 100 bases:
>100_bases AAGCGTTACAACTGTAATATCAGTCTGCTCTATTAACTGATAATACTTAAAATGAAGGTAGCCCAATCATGGTCTACCTT TTTACTTTAAAGGCCACTGT
Downstream 100 bases:
>100_bases TCAGCTAAAAACTGGCCATGAGCCGCTTAATATAAATGATTCAACCATGCAAAGTAATATGCACAGTAATACCGACAGAA TTAAACAAAGCCTGAAAAAA
Product: ABC phosphate transporter inner membrane protein, PstC-like protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTSTALILIITLLTLGSYWYGMQRSIKVAGGVSQIKNMHSLPQQFGLLTAFCCGLPALFLLLLWGIVEPIIIESLLVNSL GKSVQALSTADLSLYLNDIRIMAGSALSDLSNLSDLSNEVVKQQAALYLRVLKDQASMLKAGLILITALASVMFIVSRFK LSFSARALSESVTKFLFLSCSIVAIFTTLGILMSVLFESLKFFQSVSTLDFLFGTTWSPQIAMRSEQVGSSGAFGAVPLF AGTMLISFIAMTIAAPVGLLTAIYLSQYASPTLRTVAKPMLEILAGIPTVVYGFFAALTVAPFIRDTGEALGLNVASESA LAAGIVMGVMIIPFVSSLSDDALNAVPQALKEGSLAMGATESETIKNVLLPAALPGIIGAMLLAVSRAIGETMIVVMAAG MAANLTANPLAAVTTVTVQIVTLLTGDQEFDSPKTLAAFALGLMLFVTTLLLNVIALKVVRKYREQYD
Sequences:
>Translated_468_residues MTSTALILIITLLTLGSYWYGMQRSIKVAGGVSQIKNMHSLPQQFGLLTAFCCGLPALFLLLLWGIVEPIIIESLLVNSL GKSVQALSTADLSLYLNDIRIMAGSALSDLSNLSDLSNEVVKQQAALYLRVLKDQASMLKAGLILITALASVMFIVSRFK LSFSARALSESVTKFLFLSCSIVAIFTTLGILMSVLFESLKFFQSVSTLDFLFGTTWSPQIAMRSEQVGSSGAFGAVPLF AGTMLISFIAMTIAAPVGLLTAIYLSQYASPTLRTVAKPMLEILAGIPTVVYGFFAALTVAPFIRDTGEALGLNVASESA LAAGIVMGVMIIPFVSSLSDDALNAVPQALKEGSLAMGATESETIKNVLLPAALPGIIGAMLLAVSRAIGETMIVVMAAG MAANLTANPLAAVTTVTVQIVTLLTGDQEFDSPKTLAAFALGLMLFVTTLLLNVIALKVVRKYREQYD >Mature_467_residues TSTALILIITLLTLGSYWYGMQRSIKVAGGVSQIKNMHSLPQQFGLLTAFCCGLPALFLLLLWGIVEPIIIESLLVNSLG KSVQALSTADLSLYLNDIRIMAGSALSDLSNLSDLSNEVVKQQAALYLRVLKDQASMLKAGLILITALASVMFIVSRFKL SFSARALSESVTKFLFLSCSIVAIFTTLGILMSVLFESLKFFQSVSTLDFLFGTTWSPQIAMRSEQVGSSGAFGAVPLFA GTMLISFIAMTIAAPVGLLTAIYLSQYASPTLRTVAKPMLEILAGIPTVVYGFFAALTVAPFIRDTGEALGLNVASESAL AAGIVMGVMIIPFVSSLSDDALNAVPQALKEGSLAMGATESETIKNVLLPAALPGIIGAMLLAVSRAIGETMIVVMAAGM AANLTANPLAAVTTVTVQIVTLLTGDQEFDSPKTLAAFALGLMLFVTTLLLNVIALKVVRKYREQYD
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=286, Percent_Identity=29.7202797202797, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 49538; Mature: 49406
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTALILIITLLTLGSYWYGMQRSIKVAGGVSQIKNMHSLPQQFGLLTAFCCGLPALFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLWGIVEPIIIESLLVNSLGKSVQALSTADLSLYLNDIRIMAGSALSDLSNLSDLSNEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKQQAALYLRVLKDQASMLKAGLILITALASVMFIVSRFKLSFSARALSESVTKFLFLSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIVAIFTTLGILMSVLFESLKFFQSVSTLDFLFGTTWSPQIAMRSEQVGSSGAFGAVPLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHH AGTMLISFIAMTIAAPVGLLTAIYLSQYASPTLRTVAKPMLEILAGIPTVVYGFFAALTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APFIRDTGEALGLNVASESALAAGIVMGVMIIPFVSSLSDDALNAVPQALKEGSLAMGAT HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC ESETIKNVLLPAALPGIIGAMLLAVSRAIGETMIVVMAAGMAANLTANPLAAVTTVTVQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHH VTLLTGDQEFDSPKTLAAFALGLMLFVTTLLLNVIALKVVRKYREQYD HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSTALILIITLLTLGSYWYGMQRSIKVAGGVSQIKNMHSLPQQFGLLTAFCCGLPALFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLWGIVEPIIIESLLVNSLGKSVQALSTADLSLYLNDIRIMAGSALSDLSNLSDLSNEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKQQAALYLRVLKDQASMLKAGLILITALASVMFIVSRFKLSFSARALSESVTKFLFLSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIVAIFTTLGILMSVLFESLKFFQSVSTLDFLFGTTWSPQIAMRSEQVGSSGAFGAVPLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHH AGTMLISFIAMTIAAPVGLLTAIYLSQYASPTLRTVAKPMLEILAGIPTVVYGFFAALTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APFIRDTGEALGLNVASESALAAGIVMGVMIIPFVSSLSDDALNAVPQALKEGSLAMGAT HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC ESETIKNVLLPAALPGIIGAMLLAVSRAIGETMIVVMAAGMAANLTANPLAAVTTVTVQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHH VTLLTGDQEFDSPKTLAAFALGLMLFVTTLLLNVIALKVVRKYREQYD HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]