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The map label for this gene is 119945985

Identifier: 119945985

GI number: 119945985

Start: 2826154

End: 2826651

Strand: Direct

Name: 119945985

Synonym: Ping_2325

Alternate gene names: NA

Gene position: 2826154-2826651 (Clockwise)

Preceding gene: 119945976

Following gene: 119945986

Centisome position: 61.98

GC content: 37.75

Gene sequence:

>498_bases
ATGTTAAACAAAATATTAACTATTGGTGCGTTACTAATGAGCAGTTTGATTTTTATGCCTTTGGCACAAGCAAACAGTCA
TGTCATGAAAAAAGATATTGTTGATGTGGCTGTTGAAAATGGTTCGTTTACAACCCTTGTTGCAGCATTAAAAGCAGCTG
AATTGGTGGATACTTTAAAAGGTAAAGGACCTTTCACTGTGTTTGCACCAACTGACGAGGCATTTGCTAAATTACCTGAA
GGCACGTTAGAAATGTTACTAATGCCTGAAAACAAAGAACAGTTGGTTTCAATACTAACCTACCATGTAGTTGCCGGCAA
AGTAATGGCTAAAGATGTAATGAAACTCGACAGTGCAACAACTATTCAGGGACAAGATGTTATGGTGCACATCATGGACG
GTAAAGTAATGATAGACGATGCTACCGTAGTGATAGCTGATGTCAAAGCAAGCAATGGCGTTATCCATGTAATAGACAGT
GTGATTTTACCAAAATAA

Upstream 100 bases:

>100_bases
TTATTATATAAAAATAATGATCTACTATTTAAAAGGGAACGTACTTAGTAGCGCAAAACATCATATGATGTTTTGAACGT
TAACTTAAAAGGAAAGTATT

Downstream 100 bases:

>100_bases
TTTCCACTTATCAGTGCACAGTTTAATCATTAAGCTGTGCACTATCAGCATAATTATCAACTCTATAAAAAGATCGCGTA
AAAGATCGTACAGCTAAATC

Product: beta-Ig-H3/fasciclin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MLNKILTIGALLMSSLIFMPLAQANSHVMKKDIVDVAVENGSFTTLVAALKAAELVDTLKGKGPFTVFAPTDEAFAKLPE
GTLEMLLMPENKEQLVSILTYHVVAGKVMAKDVMKLDSATTIQGQDVMVHIMDGKVMIDDATVVIADVKASNGVIHVIDS
VILPK

Sequences:

>Translated_165_residues
MLNKILTIGALLMSSLIFMPLAQANSHVMKKDIVDVAVENGSFTTLVAALKAAELVDTLKGKGPFTVFAPTDEAFAKLPE
GTLEMLLMPENKEQLVSILTYHVVAGKVMAKDVMKLDSATTIQGQDVMVHIMDGKVMIDDATVVIADVKASNGVIHVIDS
VILPK
>Mature_165_residues
MLNKILTIGALLMSSLIFMPLAQANSHVMKKDIVDVAVENGSFTTLVAALKAAELVDTLKGKGPFTVFAPTDEAFAKLPE
GTLEMLLMPENKEQLVSILTYHVVAGKVMAKDVMKLDSATTIQGQDVMVHIMDGKVMIDDATVVIADVKASNGVIHVIDS
VILPK

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=132, Percent_Identity=34.8484848484849, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI61743980, Length=116, Percent_Identity=35.3448275862069, Blast_Score=67, Evalue=5e-12,
Organism=Homo sapiens, GI61743978, Length=139, Percent_Identity=30.2158273381295, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI209862911, Length=133, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=9e-11,
Organism=Homo sapiens, GI209863011, Length=133, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=9e-11,
Organism=Homo sapiens, GI209863034, Length=133, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 17661; Mature: 17661

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKILTIGALLMSSLIFMPLAQANSHVMKKDIVDVAVENGSFTTLVAALKAAELVDTLK
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHC
GKGPFTVFAPTDEAFAKLPEGTLEMLLMPENKEQLVSILTYHVVAGKVMAKDVMKLDSAT
CCCCEEEECCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TIQGQDVMVHIMDGKVMIDDATVVIADVKASNGVIHVIDSVILPK
EECCCCEEEEEECCEEEEECCEEEEEEECCCCCEEEEEHHHHCCC
>Mature Secondary Structure
MLNKILTIGALLMSSLIFMPLAQANSHVMKKDIVDVAVENGSFTTLVAALKAAELVDTLK
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHC
GKGPFTVFAPTDEAFAKLPEGTLEMLLMPENKEQLVSILTYHVVAGKVMAKDVMKLDSAT
CCCCEEEECCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TIQGQDVMVHIMDGKVMIDDATVVIADVKASNGVIHVIDSVILPK
EECCCCEEEEEECCEEEEECCEEEEEEECCCCCEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]