| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is mptN [H]
Identifier: 119945982
GI number: 119945982
Start: 2823083
End: 2823973
Strand: Reverse
Name: mptN [H]
Synonym: Ping_2322
Alternate gene names: 119945982
Gene position: 2823973-2823083 (Counterclockwise)
Preceding gene: 119945983
Following gene: 119945981
Centisome position: 61.93
GC content: 45.34
Gene sequence:
>891_bases TTGAATAATTTAAAAGTTGGCGTTATTGGTATTCCGGGTAAATGGTCGACAGAAGTGCTGGCTGACCGCCTTGAAGAGAT GACTGGTTTTCGCTTAGTAATCGATATGGCAGAAGTGACCCTTGATCTTGCGTCTAAGCATTTAATGTTTCGTGGTATTA ATCTTTGCGAGCTCGATGGATTGATTGTAAAAAAAATCAGCCAAGCCTATTCACCCTCGATGCTGGATCGCATTGAGTTG CTGCGTGTTGCGGAGCAGGCAGGGGTAAGGGTTTTTTCTCGCCCCGAAAGTATTTTACGGCTAGTTGATCGTTTGAGCTG TACCGTGACGTTACGTAATCATGATATCCCAATGCCAAAAACCTGTGTGACCGAATCGCTAGATGCGGCTGTGTCGGCCA TTGAGGAATATGGTGAAGTGGTATTAAAACCCTTATTCTCAACGAAAGCGCGCGGCATGACATTACTAAATGCCAAGCAG CCTCGCGATGAATTACGCTCACAACTGAGTCTATTTCAGCAAGATAACCCCATGCTGTACTTGCAGCAAAAATGTGATCT TCATGGGCAGGATCTTGGTATTGTATTTTTGGGCGGGGAGTATATTGGAACCTATGCGCGGGTATCACAAAGTGATAGCT GGAATACCACGATATTAGCAGGTGGTGAATATAAGCCCTTTACACCCGATGATGAGGTGATAGCGCTCGCCAAAAAAGCC CAGCAGCCCTTTGCCCTCGATTTCACAACCGTTGATGTCGCTTTTACGGATGATGGGCCAATCGTATTTGAAGTGTCTGC TTTTGGTGGTTTTAAAGGCGCGCTGGACGGATGCGGTATTGATGCGGCAAAATTGTATAGCCAGTATATTATTGATTCTT TTGCTGGTTAA
Upstream 100 bases:
>100_bases GAGCGTATGTATTTTCGCGCGCGCTATTTACTAGAGCGCTGTTTAGCTGTTGAACGGGGAAAAGAATCTAGGTTCAAATT ACCTTTTGGAGACTTATTTT
Downstream 100 bases:
>100_bases ATGCGACTCTTCGCAAATGCACTTTTACTTTATTAACTTATTTTTGCAGTGGTTTTGATACGAATATTATTTGATTGAAC AGTATTAAACGGCGGTGAAT
Product: RimK domain-containing protein ATP-grasp
Products: NA
Alternate protein names: H(4)MPT:alpha-L-glutamate ligase [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNNLKVGVIGIPGKWSTEVLADRLEEMTGFRLVIDMAEVTLDLASKHLMFRGINLCELDGLIVKKISQAYSPSMLDRIEL LRVAEQAGVRVFSRPESILRLVDRLSCTVTLRNHDIPMPKTCVTESLDAAVSAIEEYGEVVLKPLFSTKARGMTLLNAKQ PRDELRSQLSLFQQDNPMLYLQQKCDLHGQDLGIVFLGGEYIGTYARVSQSDSWNTTILAGGEYKPFTPDDEVIALAKKA QQPFALDFTTVDVAFTDDGPIVFEVSAFGGFKGALDGCGIDAAKLYSQYIIDSFAG
Sequences:
>Translated_296_residues MNNLKVGVIGIPGKWSTEVLADRLEEMTGFRLVIDMAEVTLDLASKHLMFRGINLCELDGLIVKKISQAYSPSMLDRIEL LRVAEQAGVRVFSRPESILRLVDRLSCTVTLRNHDIPMPKTCVTESLDAAVSAIEEYGEVVLKPLFSTKARGMTLLNAKQ PRDELRSQLSLFQQDNPMLYLQQKCDLHGQDLGIVFLGGEYIGTYARVSQSDSWNTTILAGGEYKPFTPDDEVIALAKKA QQPFALDFTTVDVAFTDDGPIVFEVSAFGGFKGALDGCGIDAAKLYSQYIIDSFAG >Mature_296_residues MNNLKVGVIGIPGKWSTEVLADRLEEMTGFRLVIDMAEVTLDLASKHLMFRGINLCELDGLIVKKISQAYSPSMLDRIEL LRVAEQAGVRVFSRPESILRLVDRLSCTVTLRNHDIPMPKTCVTESLDAAVSAIEEYGEVVLKPLFSTKARGMTLLNAKQ PRDELRSQLSLFQQDNPMLYLQQKCDLHGQDLGIVFLGGEYIGTYARVSQSDSWNTTILAGGEYKPFTPDDEVIALAKKA QQPFALDFTTVDVAFTDDGPIVFEVSAFGGFKGALDGCGIDAAKLYSQYIIDSFAG
Specific function: Catalyzes the ATP or GTP-dependent addition of one L- glutamate molecule to tetrahydromethanopterin, producing tetrahydrosarcinapterin [H]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Homo sapiens, GI134254462, Length=270, Percent_Identity=26.2962962962963, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1787076, Length=260, Percent_Identity=24.6153846153846, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR004666 [H]
Pfam domain/function: PF08443 RimK [H]
EC number: NA
Molecular weight: Translated: 32597; Mature: 32597
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLKVGVIGIPGKWSTEVLADRLEEMTGFRLVIDMAEVTLDLASKHLMFRGINLCELDG CCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEHHCH LIVKKISQAYSPSMLDRIELLRVAEQAGVRVFSRPESILRLVDRLSCTVTLRNHDIPMPK HHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHEEEEEEECCCCCCCH TCVTESLDAAVSAIEEYGEVVLKPLFSTKARGMTLLNAKQPRDELRSQLSLFQQDNPMLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEE LQQKCDLHGQDLGIVFLGGEYIGTYARVSQSDSWNTTILAGGEYKPFTPDDEVIALAKKA EEECCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHC QQPFALDFTTVDVAFTDDGPIVFEVSAFGGFKGALDGCGIDAAKLYSQYIIDSFAG CCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNNLKVGVIGIPGKWSTEVLADRLEEMTGFRLVIDMAEVTLDLASKHLMFRGINLCELDG CCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEHHCH LIVKKISQAYSPSMLDRIELLRVAEQAGVRVFSRPESILRLVDRLSCTVTLRNHDIPMPK HHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHEEEEEEECCCCCCCH TCVTESLDAAVSAIEEYGEVVLKPLFSTKARGMTLLNAKQPRDELRSQLSLFQQDNPMLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEE LQQKCDLHGQDLGIVFLGGEYIGTYARVSQSDSWNTTILAGGEYKPFTPDDEVIALAKKA EEECCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHC QQPFALDFTTVDVAFTDDGPIVFEVSAFGGFKGALDGCGIDAAKLYSQYIIDSFAG CCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Glu; Ribosomal protein S6 [C]
Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]
General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]