| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945983
Identifier: 119945983
GI number: 119945983
Start: 2823966
End: 2825609
Strand: Reverse
Name: 119945983
Synonym: Ping_2323
Alternate gene names: NA
Gene position: 2825609-2823966 (Counterclockwise)
Preceding gene: 119945984
Following gene: 119945982
Centisome position: 61.97
GC content: 42.64
Gene sequence:
>1644_bases ATGCTTGAACTTAATAAACAGACTCGCGAAAACTTACATTTCTTTTTTTTAGAAGTTCATGAGCAGCTATCGCTTGTAGA GCTATATTTCCGCCATCCTGATGCACGAGTGGTGCAGCGACTTACCGGGCGGGCAGGATATTCTGATAATCTGCGCAGTC GTATTCAGCAGGGTCTGATGCGTCAATTAATGGCACGCAAAAAGAATCGCTCCTCAGATGTAGGCCTTAAAGCCATTGAG GAGCTGGTGTTTGACGTATCCGGCTTATGCAGTCTTGGCTGTGAAGCGATTCAGGAATGTCATAAGCATGTTTTGCCTGA TCAGTTGAGTGCGCGTAAGCTATGTGCCAAATTGGTGAAGTCATTACGCCGAACAATAGCGGATATCGAACCCGCATTAA GTGAATACGATTGCCATAAAGCAATTACAATTGGTAAAGCCGCCCGTAGTCTGACTAAGCGCCTGAAGCCAATTACAGAG AAAATACTGACGGACTCATCATCAGGTGACTCGAAAAGTATTTCCGGGCTGTTGTTTAGTACCTATGCTTTGGGCCTAAT GCTAAAGCAGCTAGAAAAAGTATCGGAAGCTATCCTCACGGCAACCCTAGGCCAAAAAATGAATATTGGGCGTTATCGCG CTTTGGCGCGAGTGGCTGATCAATATAAAACTGAAACAGACAATCTTCAAATAAATACGGTTGCCGAGACTCGCTCGGGA AGTACGATTGCAGGGTTGCGACTTGTAACTGATAGGTATGAATCTTCTCAATATATGGCGATTTTTAAGGAAGGGGATCG TCATAAGCTTAAGGAGGAGGTCGACGGTGTAGAGAGCTGGCATGGTATTTTTCCCGGGCTAGCACCCAAAGTGCTTTCCT ATAATAAAAAAGGTGATCGCGCATCGTTATTAATTGAACATCTTCCTGGTCATACATTTGAAAATTTAGTATTAAGTGAT GATACTAAATTATTAAATAACGGACTAAAATCACTGCTTAAAACATTAAAGAAGGTGTGGAACGCGACCCATCTTAATGA ACCTGCCAGTGCATATTATTGTCAGCAACTGGAAACACGTTTACCAGTTATTTTTGGTGTTCACCCGCAGTTTCAAACAT CGTATCAGTCAGTCTGCGGTATTCGCGTTCTTTCCTTTGAAGACCTCCTGACTCAGGCCAAAGCAAGAGAGTCAGGGTTT TGTGCGCCATTTTCGGTTTACATTCATGGTGATTTCAATCTTGATAATATCTTATTTGACCCTGCAGAGAATCACATCAA TTTTATTGATTTACACCGTTCCTGTTATCAGGATTATGTACAAGATATTTCAGTATTTATGGTCTCTGTATACCGTCTGC AGATCATAGATCATGACCGCCGAAAACAGGCGATGGATGTTGTTTTACGCTTTATTGGTGCCATGCGACATTACGCAAAG AGCCGCGATGATACCTTTTTTGAGTATCGTCTTGCCTTTGCACTCGCACGTTCCTTTGCTTCTTCAACGCGCTTTATTCT AGATCGCCGTTTGTCTGAGCGTATGTATTTTCGCGCGCGCTATTTACTAGAGCGCTGTTTAGCTGTTGAACGGGGAAAAG AATCTAGGTTCAAATTACCTTTTGGAGACTTATTTTTTGAATAA
Upstream 100 bases:
>100_bases TTGTCATATTTCTGTAACAAAAATGCTCTTTCAATACATGTGTTTTATACTATGAGGGTGTTATCATTCATCGCGTAAAT TCTTATCATATGAAGATTAG
Downstream 100 bases:
>100_bases TTTAAAAGTTGGCGTTATTGGTATTCCGGGTAAATGGTCGACAGAAGTGCTGGCTGACCGCCTTGAAGAGATGACTGGTT TTCGCTTAGTAATCGATATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MLELNKQTRENLHFFFLEVHEQLSLVELYFRHPDARVVQRLTGRAGYSDNLRSRIQQGLMRQLMARKKNRSSDVGLKAIE ELVFDVSGLCSLGCEAIQECHKHVLPDQLSARKLCAKLVKSLRRTIADIEPALSEYDCHKAITIGKAARSLTKRLKPITE KILTDSSSGDSKSISGLLFSTYALGLMLKQLEKVSEAILTATLGQKMNIGRYRALARVADQYKTETDNLQINTVAETRSG STIAGLRLVTDRYESSQYMAIFKEGDRHKLKEEVDGVESWHGIFPGLAPKVLSYNKKGDRASLLIEHLPGHTFENLVLSD DTKLLNNGLKSLLKTLKKVWNATHLNEPASAYYCQQLETRLPVIFGVHPQFQTSYQSVCGIRVLSFEDLLTQAKARESGF CAPFSVYIHGDFNLDNILFDPAENHINFIDLHRSCYQDYVQDISVFMVSVYRLQIIDHDRRKQAMDVVLRFIGAMRHYAK SRDDTFFEYRLAFALARSFASSTRFILDRRLSERMYFRARYLLERCLAVERGKESRFKLPFGDLFFE
Sequences:
>Translated_547_residues MLELNKQTRENLHFFFLEVHEQLSLVELYFRHPDARVVQRLTGRAGYSDNLRSRIQQGLMRQLMARKKNRSSDVGLKAIE ELVFDVSGLCSLGCEAIQECHKHVLPDQLSARKLCAKLVKSLRRTIADIEPALSEYDCHKAITIGKAARSLTKRLKPITE KILTDSSSGDSKSISGLLFSTYALGLMLKQLEKVSEAILTATLGQKMNIGRYRALARVADQYKTETDNLQINTVAETRSG STIAGLRLVTDRYESSQYMAIFKEGDRHKLKEEVDGVESWHGIFPGLAPKVLSYNKKGDRASLLIEHLPGHTFENLVLSD DTKLLNNGLKSLLKTLKKVWNATHLNEPASAYYCQQLETRLPVIFGVHPQFQTSYQSVCGIRVLSFEDLLTQAKARESGF CAPFSVYIHGDFNLDNILFDPAENHINFIDLHRSCYQDYVQDISVFMVSVYRLQIIDHDRRKQAMDVVLRFIGAMRHYAK SRDDTFFEYRLAFALARSFASSTRFILDRRLSERMYFRARYLLERCLAVERGKESRFKLPFGDLFFE >Mature_547_residues MLELNKQTRENLHFFFLEVHEQLSLVELYFRHPDARVVQRLTGRAGYSDNLRSRIQQGLMRQLMARKKNRSSDVGLKAIE ELVFDVSGLCSLGCEAIQECHKHVLPDQLSARKLCAKLVKSLRRTIADIEPALSEYDCHKAITIGKAARSLTKRLKPITE KILTDSSSGDSKSISGLLFSTYALGLMLKQLEKVSEAILTATLGQKMNIGRYRALARVADQYKTETDNLQINTVAETRSG STIAGLRLVTDRYESSQYMAIFKEGDRHKLKEEVDGVESWHGIFPGLAPKVLSYNKKGDRASLLIEHLPGHTFENLVLSD DTKLLNNGLKSLLKTLKKVWNATHLNEPASAYYCQQLETRLPVIFGVHPQFQTSYQSVCGIRVLSFEDLLTQAKARESGF CAPFSVYIHGDFNLDNILFDPAENHINFIDLHRSCYQDYVQDISVFMVSVYRLQIIDHDRRKQAMDVVLRFIGAMRHYAK SRDDTFFEYRLAFALARSFASSTRFILDRRLSERMYFRARYLLERCLAVERGKESRFKLPFGDLFFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62640; Mature: 62640
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELNKQTRENLHFFFLEVHEQLSLVELYFRHPDARVVQRLTGRAGYSDNLRSRIQQGLM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHH RQLMARKKNRSSDVGLKAIEELVFDVSGLCSLGCEAIQECHKHVLPDQLSARKLCAKLVK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLRRTIADIEPALSEYDCHKAITIGKAARSLTKRLKPITEKILTDSSSGDSKSISGLLFS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TYALGLMLKQLEKVSEAILTATLGQKMNIGRYRALARVADQYKTETDNLQINTVAETRSG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC STIAGLRLVTDRYESSQYMAIFKEGDRHKLKEEVDGVESWHGIFPGLAPKVLSYNKKGDR CCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCH ASLLIEHLPGHTFENLVLSDDTKLLNNGLKSLLKTLKKVWNATHLNEPASAYYCQQLETR HHHHHHHCCCCCHHCCEECCCHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHC LPVIFGVHPQFQTSYQSVCGIRVLSFEDLLTQAKARESGFCAPFSVYIHGDFNLDNILFD CCEEEECCCCHHHHHHHHHCCCEECHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEC PAENHINFIDLHRSCYQDYVQDISVFMVSVYRLQIIDHDRRKQAMDVVLRFIGAMRHYAK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC SRDDTFFEYRLAFALARSFASSTRFILDRRLSERMYFRARYLLERCLAVERGKESRFKLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FGDLFFE HHHHCCC >Mature Secondary Structure MLELNKQTRENLHFFFLEVHEQLSLVELYFRHPDARVVQRLTGRAGYSDNLRSRIQQGLM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHH RQLMARKKNRSSDVGLKAIEELVFDVSGLCSLGCEAIQECHKHVLPDQLSARKLCAKLVK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLRRTIADIEPALSEYDCHKAITIGKAARSLTKRLKPITEKILTDSSSGDSKSISGLLFS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TYALGLMLKQLEKVSEAILTATLGQKMNIGRYRALARVADQYKTETDNLQINTVAETRSG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC STIAGLRLVTDRYESSQYMAIFKEGDRHKLKEEVDGVESWHGIFPGLAPKVLSYNKKGDR CCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCH ASLLIEHLPGHTFENLVLSDDTKLLNNGLKSLLKTLKKVWNATHLNEPASAYYCQQLETR HHHHHHHCCCCCHHCCEECCCHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHC LPVIFGVHPQFQTSYQSVCGIRVLSFEDLLTQAKARESGFCAPFSVYIHGDFNLDNILFD CCEEEECCCCHHHHHHHHHCCCEECHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEC PAENHINFIDLHRSCYQDYVQDISVFMVSVYRLQIIDHDRRKQAMDVVLRFIGAMRHYAK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC SRDDTFFEYRLAFALARSFASSTRFILDRRLSERMYFRARYLLERCLAVERGKESRFKLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FGDLFFE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA