| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945966
Identifier: 119945966
GI number: 119945966
Start: 2801834
End: 2803348
Strand: Reverse
Name: 119945966
Synonym: Ping_2306
Alternate gene names: NA
Gene position: 2803348-2801834 (Counterclockwise)
Preceding gene: 119945967
Following gene: 119945965
Centisome position: 61.48
GC content: 34.13
Gene sequence:
>1515_bases ATGAATAATACAGATGATATCGTAAAAGTTCTAAGATATATCGAAGAGAATATGCGCGTAACGGACCAAACTTCAATTGA ATACCTTGATGCACAAGGCAACATTGATCGTCTTAGTATTAGGCAAAATCACATAATCTTTGGACGTCGAGGTTCTGGTA AGTCACTACTGCTTAAATCTTTAGGGCAAAGGAGTGAATTTTCTTGTATTAGTGTAAATATGGAAGATTTTAAAGATATA AGTTTTCCAAACTCAATTATTCAAGTTCAGAAATCAATACTTAGGCAACTTTTGCCTATTGTGAAGAAAGTGCACGGTAA ATACGCACTAGCATACTGGATGAAAGCATTACCTTTAAAGAGAAAGCTTACAAAGCAAATAAAAACACTTGATGAGAAAT TAATCGATCCTGATGAATATGATAAGTCCTTCAAAGAAACAAAGGCTGGTAAGGTTTTTGGTAAGGGGAAAGGTAAAGTT GGAGGAAGTGGGTTTGAGTCAGGTTCTGAAGCATCTGAAGAGATAGAAACATCAAAACAAATTAAAATCGATAAGCTTGA TATTTTAAAGAATAAATTAACCGATATTAAAGAGCTGTTTTCTGAGGTGGCGGCGTTTATTGGTAAGGATATCTACCTGA TACTAGATGACTTTTATTTTATAAGGAAGGATGAGCAACCCTATTTTTTAGATTTTTTTCATAGAGTATCAAAGAATACT CCTTTATATCTTAAAGTCGCTACTATAAAGCATCGAAGTAAACTTTATGTTCAAGATAGCAGCTATATTGGTGTAGAGAT CCCTCATGACGCGCAACCGCTAAATCTCGACTATAGTCTTCAAGATTTTGATGCTTTAGTAACTTTCATGAAAAAATTAC TAAAGCATATTAATGAGAAAGTTGGCGTTGAAATCGACTATAGTAAATTGATAACTGATAATGCATTTAGATTTTTATGT CTAGCATCAGGCGGAGTGCCGAGAGATTTTTTTAGCCTTCTGATTTCCTTAGGTCCATCACTTGGTGGCGGAAAATCAAT TTCAAAACCAAACGTTATTGAGAAAGCTATTGAAAGTGTTGCAAATAAGATGGAACACTTCAAAAAAGATGCAGCAAATG AAGATGTTTTGCTTGAGCATTATTTATGGATAATTAAAGGGGACATAATTGATAATAAAAAATGGAATGCATTCCTCCTT TCAAATTCAGAAGTTCAAAACCACCCTCAAATTAATCAAGCCATTAAAGAATTAGTAGATTTACGGTTTCTTCATTTGGT AAATCCTAATATTAGCGCATCAAATAGTGATGGAACTCGTTATTCTGCTTACATGTTAGATATAGGTTTATTCCCCAATG CCAATCCAAGAGGCTTTCATCAGGTTGAGCCGGGCCAAAAAGATGAACATCATAGAGTAGATAAAATACGATCAGCTCCC AAATTAGATCTTGGTAGTTTTAGTCAAAGAATTTGTGAGCTTAAAGCACCGTTGGAATTAGAATTGACTGACTGA
Upstream 100 bases:
>100_bases AAAAGGTTTGGGTGCTGAGATGGTCGCTATGCCATGCTTAAAGCGTATCAACTAAAGCAAAAGTAGCCCTGTCTTTTTTC TAAGCGTATATAGGAAGCAA
Downstream 100 bases:
>100_bases GATGTCGCAACATAACGAGACGTTGCATTCGTACTAGAGACAGTTATCGCATTTTTGCTAAAAGAAAAATCGGTAAAAAC AGCACCAACTTACTCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MNNTDDIVKVLRYIEENMRVTDQTSIEYLDAQGNIDRLSIRQNHIIFGRRGSGKSLLLKSLGQRSEFSCISVNMEDFKDI SFPNSIIQVQKSILRQLLPIVKKVHGKYALAYWMKALPLKRKLTKQIKTLDEKLIDPDEYDKSFKETKAGKVFGKGKGKV GGSGFESGSEASEEIETSKQIKIDKLDILKNKLTDIKELFSEVAAFIGKDIYLILDDFYFIRKDEQPYFLDFFHRVSKNT PLYLKVATIKHRSKLYVQDSSYIGVEIPHDAQPLNLDYSLQDFDALVTFMKKLLKHINEKVGVEIDYSKLITDNAFRFLC LASGGVPRDFFSLLISLGPSLGGGKSISKPNVIEKAIESVANKMEHFKKDAANEDVLLEHYLWIIKGDIIDNKKWNAFLL SNSEVQNHPQINQAIKELVDLRFLHLVNPNISASNSDGTRYSAYMLDIGLFPNANPRGFHQVEPGQKDEHHRVDKIRSAP KLDLGSFSQRICELKAPLELELTD
Sequences:
>Translated_504_residues MNNTDDIVKVLRYIEENMRVTDQTSIEYLDAQGNIDRLSIRQNHIIFGRRGSGKSLLLKSLGQRSEFSCISVNMEDFKDI SFPNSIIQVQKSILRQLLPIVKKVHGKYALAYWMKALPLKRKLTKQIKTLDEKLIDPDEYDKSFKETKAGKVFGKGKGKV GGSGFESGSEASEEIETSKQIKIDKLDILKNKLTDIKELFSEVAAFIGKDIYLILDDFYFIRKDEQPYFLDFFHRVSKNT PLYLKVATIKHRSKLYVQDSSYIGVEIPHDAQPLNLDYSLQDFDALVTFMKKLLKHINEKVGVEIDYSKLITDNAFRFLC LASGGVPRDFFSLLISLGPSLGGGKSISKPNVIEKAIESVANKMEHFKKDAANEDVLLEHYLWIIKGDIIDNKKWNAFLL SNSEVQNHPQINQAIKELVDLRFLHLVNPNISASNSDGTRYSAYMLDIGLFPNANPRGFHQVEPGQKDEHHRVDKIRSAP KLDLGSFSQRICELKAPLELELTD >Mature_504_residues MNNTDDIVKVLRYIEENMRVTDQTSIEYLDAQGNIDRLSIRQNHIIFGRRGSGKSLLLKSLGQRSEFSCISVNMEDFKDI SFPNSIIQVQKSILRQLLPIVKKVHGKYALAYWMKALPLKRKLTKQIKTLDEKLIDPDEYDKSFKETKAGKVFGKGKGKV GGSGFESGSEASEEIETSKQIKIDKLDILKNKLTDIKELFSEVAAFIGKDIYLILDDFYFIRKDEQPYFLDFFHRVSKNT PLYLKVATIKHRSKLYVQDSSYIGVEIPHDAQPLNLDYSLQDFDALVTFMKKLLKHINEKVGVEIDYSKLITDNAFRFLC LASGGVPRDFFSLLISLGPSLGGGKSISKPNVIEKAIESVANKMEHFKKDAANEDVLLEHYLWIIKGDIIDNKKWNAFLL SNSEVQNHPQINQAIKELVDLRFLHLVNPNISASNSDGTRYSAYMLDIGLFPNANPRGFHQVEPGQKDEHHRVDKIRSAP KLDLGSFSQRICELKAPLELELTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57378; Mature: 57378
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTDDIVKVLRYIEENMRVTDQTSIEYLDAQGNIDRLSIRQNHIIFGRRGSGKSLLLKS CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCEEEEEECCCCHHHHHHH LGQRSEFSCISVNMEDFKDISFPNSIIQVQKSILRQLLPIVKKVHGKYALAYWMKALPLK CCCCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHH RKLTKQIKTLDEKLIDPDEYDKSFKETKAGKVFGKGKGKVGGSGFESGSEASEEIETSKQ HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHC IKIDKLDILKNKLTDIKELFSEVAAFIGKDIYLILDDFYFIRKDEQPYFLDFFHRVSKNT EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEEECCCCHHHHHHHHHCCCC PLYLKVATIKHRSKLYVQDSSYIGVEIPHDAQPLNLDYSLQDFDALVTFMKKLLKHINEK CEEEEEEEEECCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VGVEIDYSKLITDNAFRFLCLASGGVPRDFFSLLISLGPSLGGGKSISKPNVIEKAIESV HCCEEEHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ANKMEHFKKDAANEDVLLEHYLWIIKGDIIDNKKWNAFLLSNSEVQNHPQINQAIKELVD HHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCEEEEECCCCCCCCHHHHHHHHHHH LRFLHLVNPNISASNSDGTRYSAYMLDIGLFPNANPRGFHQVEPGQKDEHHRVDKIRSAP HHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC KLDLGSFSQRICELKAPLELELTD CCCHHHHHHHHHHHCCCEEEEECC >Mature Secondary Structure MNNTDDIVKVLRYIEENMRVTDQTSIEYLDAQGNIDRLSIRQNHIIFGRRGSGKSLLLKS CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCEEEEEECCCCHHHHHHH LGQRSEFSCISVNMEDFKDISFPNSIIQVQKSILRQLLPIVKKVHGKYALAYWMKALPLK CCCCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHH RKLTKQIKTLDEKLIDPDEYDKSFKETKAGKVFGKGKGKVGGSGFESGSEASEEIETSKQ HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHC IKIDKLDILKNKLTDIKELFSEVAAFIGKDIYLILDDFYFIRKDEQPYFLDFFHRVSKNT EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEEECCCCHHHHHHHHHCCCC PLYLKVATIKHRSKLYVQDSSYIGVEIPHDAQPLNLDYSLQDFDALVTFMKKLLKHINEK CEEEEEEEEECCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VGVEIDYSKLITDNAFRFLCLASGGVPRDFFSLLISLGPSLGGGKSISKPNVIEKAIESV HCCEEEHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ANKMEHFKKDAANEDVLLEHYLWIIKGDIIDNKKWNAFLLSNSEVQNHPQINQAIKELVD HHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCEEEEECCCCCCCCHHHHHHHHHHH LRFLHLVNPNISASNSDGTRYSAYMLDIGLFPNANPRGFHQVEPGQKDEHHRVDKIRSAP HHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC KLDLGSFSQRICELKAPLELELTD CCCHHHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA