| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945967
Identifier: 119945967
GI number: 119945967
Start: 2804614
End: 2805594
Strand: Reverse
Name: 119945967
Synonym: Ping_2307
Alternate gene names: NA
Gene position: 2805594-2804614 (Counterclockwise)
Preceding gene: 119945968
Following gene: 119945966
Centisome position: 61.53
GC content: 44.04
Gene sequence:
>981_bases ATGATGGCCAGACCAAGACAAACGATAGTGAGCTTAGATGACACACCTTATTATCACTGCTGCTCACGTGTTGTACGTAA AGCATTTTTATGTGGCATTGATAACACAACTGGTGAGAACTATGAACATCGTCGAGAGTGGGTTGACTCTCGCATTATTG AGCTTGCGACTATCTTTGCGATTGATATCTGTGCCTATGCAGTGATGAGTAATCACTTGCATATTGTCCTTAAAGTGAAT GCCGATAAAGCCAATAGCTGGTCTGATAAAGCAGTGCTTGTTCAATGGCATAAAGGCTTTAAAGGCACGTTACTGACGCA GAAATTTGTTAAAGGTGAAGACCTTCATGGGCTTGAGCTTGAAACTGTTCTTAACTGCATTACCGAATATCGTCATCGCT TAATCGACATCAGTTGGTTTATGCGCTCACTCAGTGAGCCGATTGCCAGACAGGCCAATAAAGAAGACAACTGTACTGGT CGCTTCTGGGAAGGACGCTTTAAATCCCAGGCATTACTTGATGAAGCAGCGATACTGGCTTGTATGGCGTATGTTGATTT AAACCCGATTCGCGCCAAGATGGCGACAACCCTTGAAACCTCAGATTACACCAGCATTCAGCGTCGAATTCACTCAGCCA TAAAAGGAGAGCAACCTGCAGAATTACTGCCGTTTGTAGGCGATGAACGCCTTAATATACCTGACGGGTTGATGTTCAGT GTGATGGATTACATTGTGCTTGTTGAAGATACTGGTCGAATTATACGAGAAGATAAACGTGGTGCCATTAGTTCAAGCAG TCAAGATATCCTCAATAGACTTAATATTCCTGCAGAGAACTGGCTTAAAATCACCACCGAATTTGGTCATTTATTTAAAG GGGCGGTGGGTGCCTTACCGGCATTAACTGAATACTGTGAACATTTAGACAGAAAGCGCCGCCACGGCGCAGCAAACTGC CAACGCTGGTTGTGTGCTTAA
Upstream 100 bases:
>100_bases TGGCGAATATTTATGATTTAACTTAGCCACCCATCATTGTTGGCGAATATTTAAGCACTGGTCTAGTCTTTAGTTACCTT TGTTTACTTGCAGGTAATAA
Downstream 100 bases:
>100_bases AGCTCAATTTTTCAACTACCTGTAAGTCATTTTCTGCTTGATTGATATCAAGCTTCTTCTACTGGTTTAAAACAGTCATA TTCCTCATATTTCACAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MMARPRQTIVSLDDTPYYHCCSRVVRKAFLCGIDNTTGENYEHRREWVDSRIIELATIFAIDICAYAVMSNHLHIVLKVN ADKANSWSDKAVLVQWHKGFKGTLLTQKFVKGEDLHGLELETVLNCITEYRHRLIDISWFMRSLSEPIARQANKEDNCTG RFWEGRFKSQALLDEAAILACMAYVDLNPIRAKMATTLETSDYTSIQRRIHSAIKGEQPAELLPFVGDERLNIPDGLMFS VMDYIVLVEDTGRIIREDKRGAISSSSQDILNRLNIPAENWLKITTEFGHLFKGAVGALPALTEYCEHLDRKRRHGAANC QRWLCA
Sequences:
>Translated_326_residues MMARPRQTIVSLDDTPYYHCCSRVVRKAFLCGIDNTTGENYEHRREWVDSRIIELATIFAIDICAYAVMSNHLHIVLKVN ADKANSWSDKAVLVQWHKGFKGTLLTQKFVKGEDLHGLELETVLNCITEYRHRLIDISWFMRSLSEPIARQANKEDNCTG RFWEGRFKSQALLDEAAILACMAYVDLNPIRAKMATTLETSDYTSIQRRIHSAIKGEQPAELLPFVGDERLNIPDGLMFS VMDYIVLVEDTGRIIREDKRGAISSSSQDILNRLNIPAENWLKITTEFGHLFKGAVGALPALTEYCEHLDRKRRHGAANC QRWLCA >Mature_326_residues MMARPRQTIVSLDDTPYYHCCSRVVRKAFLCGIDNTTGENYEHRREWVDSRIIELATIFAIDICAYAVMSNHLHIVLKVN ADKANSWSDKAVLVQWHKGFKGTLLTQKFVKGEDLHGLELETVLNCITEYRHRLIDISWFMRSLSEPIARQANKEDNCTG RFWEGRFKSQALLDEAAILACMAYVDLNPIRAKMATTLETSDYTSIQRRIHSAIKGEQPAELLPFVGDERLNIPDGLMFS VMDYIVLVEDTGRIIREDKRGAISSSSQDILNRLNIPAENWLKITTEFGHLFKGAVGALPALTEYCEHLDRKRRHGAANC QRWLCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37204; Mature: 37204
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMARPRQTIVSLDDTPYYHCCSRVVRKAFLCGIDNTTGENYEHRREWVDSRIIELATIFA CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IDICAYAVMSNHLHIVLKVNADKANSWSDKAVLVQWHKGFKGTLLTQKFVKGEDLHGLEL HHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCH ETVLNCITEYRHRLIDISWFMRSLSEPIARQANKEDNCTGRFWEGRFKSQALLDEAAILA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHH CMAYVDLNPIRAKMATTLETSDYTSIQRRIHSAIKGEQPAELLPFVGDERLNIPDGLMFS HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHH VMDYIVLVEDTGRIIREDKRGAISSSSQDILNRLNIPAENWLKITTEFGHLFKGAVGALP HHHHHEEECCCCHHHHHHCCCCCCCCHHHHHHHCCCCHHHHEEHHHHHHHHHHHHHHHHH ALTEYCEHLDRKRRHGAANCQRWLCA HHHHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MMARPRQTIVSLDDTPYYHCCSRVVRKAFLCGIDNTTGENYEHRREWVDSRIIELATIFA CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IDICAYAVMSNHLHIVLKVNADKANSWSDKAVLVQWHKGFKGTLLTQKFVKGEDLHGLEL HHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCH ETVLNCITEYRHRLIDISWFMRSLSEPIARQANKEDNCTGRFWEGRFKSQALLDEAAILA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHH CMAYVDLNPIRAKMATTLETSDYTSIQRRIHSAIKGEQPAELLPFVGDERLNIPDGLMFS HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHH VMDYIVLVEDTGRIIREDKRGAISSSSQDILNRLNIPAENWLKITTEFGHLFKGAVGALP HHHHHEEECCCCHHHHHHCCCCCCCCHHHHHHHCCCCHHHHEEHHHHHHHHHHHHHHHHH ALTEYCEHLDRKRRHGAANCQRWLCA HHHHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA