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The map label for this gene is ygbA [H]

Identifier: 119945963

GI number: 119945963

Start: 2799816

End: 2800214

Strand: Direct

Name: ygbA [H]

Synonym: Ping_2303

Alternate gene names: 119945963

Gene position: 2799816-2800214 (Clockwise)

Preceding gene: 119945956

Following gene: 119945971

Centisome position: 61.4

GC content: 41.1

Gene sequence:

>399_bases
ATGAGCGAACATACTTTACCGGGAAAACTGGGGTTGGAATTTAAGACCATTAAGGCGATGGTGGCTATTTACTGTCAAAA
ACATCACAGTAGTACAGCTCTAATGTCAGGACAAAAAACACTCTGCGCTTGCTATGCTGAATTTATCTTATATGCCAATG
AAAAATTAGACCGTTGTCCCTACGGACAGAATAAACCGACCTGTAATAAATGCCCTATTCATTGTTATAAAACAGCGCAA
CGCGAACAGGCCAGAATCATTATGCGTTACGCAGGACCCAGAATGTTATTAAGTCATCCTATTTTAGCGATAAAACATTT
ACTTGCAGAGCAGCGGCCAGTGCCGGAAAGTATTCCAGATAAAGCGTCGAATAGGCATATTCGGAATGCGGATAAATAG

Upstream 100 bases:

>100_bases
ATCAAAGTGAAGGACTCGCCAATAAAAAAGGTTGATGACCTGTATTCTACGTGAATTGAAAGTATGATTATAGGCTAATC
CATAAACTGTAATTTAATAT

Downstream 100 bases:

>100_bases
TAGCCGCTTTGTTTTATCCTTGCTAGTGCTTGTGATGATTGGTTTCACTTTCATAGATGGGGTTCAGCCCTTTGATCGGT
ACCGTATTCCTTATTCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSEHTLPGKLGLEFKTIKAMVAIYCQKHHSSTALMSGQKTLCACYAEFILYANEKLDRCPYGQNKPTCNKCPIHCYKTAQ
REQARIIMRYAGPRMLLSHPILAIKHLLAEQRPVPESIPDKASNRHIRNADK

Sequences:

>Translated_132_residues
MSEHTLPGKLGLEFKTIKAMVAIYCQKHHSSTALMSGQKTLCACYAEFILYANEKLDRCPYGQNKPTCNKCPIHCYKTAQ
REQARIIMRYAGPRMLLSHPILAIKHLLAEQRPVPESIPDKASNRHIRNADK
>Mature_131_residues
SEHTLPGKLGLEFKTIKAMVAIYCQKHHSSTALMSGQKTLCACYAEFILYANEKLDRCPYGQNKPTCNKCPIHCYKTAQR
EQARIIMRYAGPRMLLSHPILAIKHLLAEQRPVPESIPDKASNRHIRNADK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=113, Percent_Identity=42.4778761061947, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 14993; Mature: 14862

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHTLPGKLGLEFKTIKAMVAIYCQKHHSSTALMSGQKTLCACYAEFILYANEKLDRCP
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHCCC
YGQNKPTCNKCPIHCYKTAQREQARIIMRYAGPRMLLSHPILAIKHLLAEQRPVPESIPD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
KASNRHIRNADK
CCCCCCCCCCCC
>Mature Secondary Structure 
SEHTLPGKLGLEFKTIKAMVAIYCQKHHSSTALMSGQKTLCACYAEFILYANEKLDRCP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHCCC
YGQNKPTCNKCPIHCYKTAQREQARIIMRYAGPRMLLSHPILAIKHLLAEQRPVPESIPD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
KASNRHIRNADK
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]