| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is yeaZ [H]
Identifier: 119945961
GI number: 119945961
Start: 2795988
End: 2796701
Strand: Reverse
Name: yeaZ [H]
Synonym: Ping_2301
Alternate gene names: 119945961
Gene position: 2796701-2795988 (Counterclockwise)
Preceding gene: 119945962
Following gene: 119945960
Centisome position: 61.34
GC content: 45.24
Gene sequence:
>714_bases ATGTTCAAAAAGTTAAATGTGTTATGTGTCGATACTTCAACGGAAGCGTGCTCAGTTGCGGTGCTTTGCCAAACGGCGGC GGGGCAAGTCATCAATGATCAATTTATGCTGGCACCGCGTGAGCATACAACAAAAATTTTGCCCACGGTCGAGCAAGTCT TACAATCCGCGGGAGTAAACTTATCTGATATGGATTTTATTGCTTATGGCCGTGGGCCGGGCAGTTTTACCGGGGTGAGA ATAGGTATCAGCATTGCACAGGGTTTAGCCTTTGGCAGTGAAAAAAATATGGTGGGTGTTTCAACATTACAGGCGATGGC ACAACAAGCCTTTAAGATGAAGGGCGCTCAGGATGTCTATGCGGCGATTGATGCGCGGATGGGTGAGGTTTATTTTGGGC ATTACCAATTAGATAAAAAATTAATGGTGTTAGTGAATGATGAGGTGGTGATCAAACCGGCTGACTTAATCGCACGGCAG GAAAACATTGCTGAAAATGCTGTGTTAGTGGGCTCTGGTTGGGCGGCTTATCCTGAATTATCCGAGCACTTTAACGCGCC TGAAGAAACAGAAATCGAGTTTCCCAGCGCAAGATTTATGCTCGATGAAGTGATTAACTGCATCGATAAATCATTAGATA TTTTACCTGAACTGGCAACCCCTGTTTATTTGCGCGACAAGGTGACTTGGAAAAAATTACCCGGGCGCGAATAA
Upstream 100 bases:
>100_bases TTATCATTAATATTAACTAGATTCCTGCACAACAGCAGGCACTTCGAATAAATCAAATTTCCCTGTCCCGAGGGAACCCA CTGGAATAGATAGGCTAAAT
Downstream 100 bases:
>100_bases GGTGTTATTTTTAATGAGTCTCTAGTCTGCTATTTATAAAAGGAATTTTTGATGTTGCGTGTTATTTTTTGCTTTTTTTT ATTGTTGACCAGTCTAAGTT
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MFKKLNVLCVDTSTEACSVAVLCQTAAGQVINDQFMLAPREHTTKILPTVEQVLQSAGVNLSDMDFIAYGRGPGSFTGVR IGISIAQGLAFGSEKNMVGVSTLQAMAQQAFKMKGAQDVYAAIDARMGEVYFGHYQLDKKLMVLVNDEVVIKPADLIARQ ENIAENAVLVGSGWAAYPELSEHFNAPEETEIEFPSARFMLDEVINCIDKSLDILPELATPVYLRDKVTWKKLPGRE
Sequences:
>Translated_237_residues MFKKLNVLCVDTSTEACSVAVLCQTAAGQVINDQFMLAPREHTTKILPTVEQVLQSAGVNLSDMDFIAYGRGPGSFTGVR IGISIAQGLAFGSEKNMVGVSTLQAMAQQAFKMKGAQDVYAAIDARMGEVYFGHYQLDKKLMVLVNDEVVIKPADLIARQ ENIAENAVLVGSGWAAYPELSEHFNAPEETEIEFPSARFMLDEVINCIDKSLDILPELATPVYLRDKVTWKKLPGRE >Mature_237_residues MFKKLNVLCVDTSTEACSVAVLCQTAAGQVINDQFMLAPREHTTKILPTVEQVLQSAGVNLSDMDFIAYGRGPGSFTGVR IGISIAQGLAFGSEKNMVGVSTLQAMAQQAFKMKGAQDVYAAIDARMGEVYFGHYQLDKKLMVLVNDEVVIKPADLIARQ ENIAENAVLVGSGWAAYPELSEHFNAPEETEIEFPSARFMLDEVINCIDKSLDILPELATPVYLRDKVTWKKLPGRE
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=235, Percent_Identity=46.8085106382979, Blast_Score=211, Evalue=3e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25977; Mature: 25977
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKLNVLCVDTSTEACSVAVLCQTAAGQVINDQFMLAPREHTTKILPTVEQVLQSAGVN CCCCEEEEEEECCCCHHHHEEEEHHHCCCEECCCEEECCCHHHHHHHHHHHHHHHHCCCC LSDMDFIAYGRGPGSFTGVRIGISIAQGLAFGSEKNMVGVSTLQAMAQQAFKMKGAQDVY CCCCEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHH AAIDARMGEVYFGHYQLDKKLMVLVNDEVVIKPADLIARQENIAENAVLVGSGWAAYPEL HHHHHHCCCEEEEEEEECCEEEEEECCCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCH SEHFNAPEETEIEFPSARFMLDEVINCIDKSLDILPELATPVYLRDKVTWKKLPGRE HHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCC >Mature Secondary Structure MFKKLNVLCVDTSTEACSVAVLCQTAAGQVINDQFMLAPREHTTKILPTVEQVLQSAGVN CCCCEEEEEEECCCCHHHHEEEEHHHCCCEECCCEEECCCHHHHHHHHHHHHHHHHCCCC LSDMDFIAYGRGPGSFTGVRIGISIAQGLAFGSEKNMVGVSTLQAMAQQAFKMKGAQDVY CCCCEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHH AAIDARMGEVYFGHYQLDKKLMVLVNDEVVIKPADLIARQENIAENAVLVGSGWAAYPEL HHHHHHCCCEEEEEEEECCEEEEEECCCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCH SEHFNAPEETEIEFPSARFMLDEVINCIDKSLDILPELATPVYLRDKVTWKKLPGRE HHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]