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The map label for this gene is yoaA [H]

Identifier: 119945962

GI number: 119945962

Start: 2796802

End: 2798790

Strand: Reverse

Name: yoaA [H]

Synonym: Ping_2302

Alternate gene names: 119945962

Gene position: 2798790-2796802 (Counterclockwise)

Preceding gene: 119945964

Following gene: 119945961

Centisome position: 61.38

GC content: 43.04

Gene sequence:

>1989_bases
GTGATCATACTTTCAATTCAAGTAGAATACAGATCATCCGCCTTTTTTATTGTAGAGTCCTTAACTTTGATCTCATCTTT
TTTTTCAGCCTCGGGTGCCTTAAGTAAACAACTGCCTTTTTTTATCTCTCGGGATGCGCAGATTGAAATGGCTGACGCTG
TCACACAGGCCATTACAAAAAAACAAAATTTAGTCGTTGAAGCTGAAACGGGGACGGGTAAAACCTTTGCCTATTTAGCG
CCAGCGTTATTAACTTTTGATAAAGCCTCCAGTGAAAAAATTATTATTTCGACGGGCAGTAAAGCGCTACAGGAACAGCT
GTTCTTAAAAGATTTACCCTTATTAATGGCCGCGACTAATTTCACTGGTTCCGTGACTGTCTTAAAAGGGCGCAGCAACT
ACCTTTGTAATGAACGTCTGGCGCGTTTTATGCTGGAAACCAAACAGCGGGAAAAAGCATTACAAATAGAGCTGATAAAA
ATAAAAAACTGGTCGCTTACCAGTAAAACCGGCGACTTGGCTGAGATCAAAGATCTGGCTGAAGATGCATTGATTATTCC
CTCTATTACCAGTAACAATGACAACTGTTTAGGCCGTGAGTGCCCCAGTTTTGATGACTGTTTTATTGTTAAAGCGCGCA
AAAAAGCCATGGATTCAGACCTTGTGGTGATTAATCATCATCTGTTTTTTGCAGACTTAGCCGTTAAAGAAACTGGCTTT
GGAGAGCTGATCCCCGAGGCGGGGGTTTATATCTTTGATGAAGCCCACCAACTGCCCGATATTGCCAGCCTGTATTTTGG
CGAATCCCTGTCCAGCCGGCAGTTAATAGAGCTTGCTAAAGAGATAGAGTTTGTTTATCGCACTGAGCTTCGTGAAGCAA
AACAGATGTCTAAAGCGGCGGATCAGCTACGTTTAAGTGCATTAGATTTCCGGATGGCCTTTGCGATTGATAAAGGCACG
GGCAGCTGGCGTGATAAGTCTAAAGAGCGGGTGATGCAGCTGCATGTTGATCGTATCCTGCAGGTGATGGATTTTTTAAA
GGAAGTGATCCTTGAACGCTTAGGTAAAAGTGACGTTTTAGACCATTGTTTTGAGCGTTTAACCCAATTCACCCTGTTAT
TTAAAAAACTCAACAGTGTGAATGAAAGTGGGTTCAGTTACTGGTTTGAGTGTACAAAACAACATTTTTCATTAAATATC
ACCCCATTAAGTGTTGCACAGCGTTTCCAGGCCGAATGTGAAAAAAAACAGGCCAGTTGGATTTTTACCTCGGCAACGTT
ATCCGTGAAAGGCAAGTTTGATCATTTTACTGAGCTGCTCGGTTTACAAGAAAGCCAGTGTTTACAGTTAGCCAGCCCCT
TTGATTATGCAAAGCAGAGTTTATTTGTGGTCCCCCGGTTATTACCTGAGCCGGGCACACCGGGATTGGCCGATAAGCTG
GTAGAACAACTTGCGCCGGTTATTCGCGCCAGTAAAGGGCGTTGTTTCTTTTTATGTACCAGTCATGCCATGATGAATCA
GCTGGCGGCCGGGTTTCGTCAAACATTGACCTTTCCGGTCCTGTTGCAGGGGGAAAAAAGCAAACAAGCACTGCTTGATG
AGTTTATTAACCACGGTAATGCCTTATTGGTGGCAACCAGTAGTTTTTGGGAAGGGGTGGATGTGCGTGGACAGGTATTA
TCCTGTGTTATTATCGATAAAATTCCCTTTACCTCTCCTGAAGAGCCTTTATTAAAAGCGCGGATGGAAGATGCGCAATT
AAAGGGTAAAGATCCCTTTGCCGAAGTGCAATTACCACAAGCTGTTATTACTTTTAAACAGGGCGTCGGGCGATTGATTA
GGGCGGAAAAAGATAAAGGTGTATTGATCGTTTGCGATACACGTTTGGTGACCCGTAAATATGGTAATCTCTTTCTCAAT
AGTTTACCTTGCATGCCGCGTACTCGCTCCTTAGATAATGCAATCGATTTTTTAAAAACGATTGATTAG

Upstream 100 bases:

>100_bases
CATTACAGTGCGGAGCATGGGAACGAGCATGAGAAACCAAACGTTTTGCTGCTAGTGCTTTGCTCGCTCATATATTAAAT
CACAGTTTATGGATTAGCCT

Downstream 100 bases:

>100_bases
TTATCATTAATATTAACTAGATTCCTGCACAACAGCAGGCACTTCGAATAAATCAAATTTCCCTGTCCCGAGGGAACCCA
CTGGAATAGATAGGCTAAAT

Product: ATP-dependent helicase, DinG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MIILSIQVEYRSSAFFIVESLTLISSFFSASGALSKQLPFFISRDAQIEMADAVTQAITKKQNLVVEAETGTGKTFAYLA
PALLTFDKASSEKIIISTGSKALQEQLFLKDLPLLMAATNFTGSVTVLKGRSNYLCNERLARFMLETKQREKALQIELIK
IKNWSLTSKTGDLAEIKDLAEDALIIPSITSNNDNCLGRECPSFDDCFIVKARKKAMDSDLVVINHHLFFADLAVKETGF
GELIPEAGVYIFDEAHQLPDIASLYFGESLSSRQLIELAKEIEFVYRTELREAKQMSKAADQLRLSALDFRMAFAIDKGT
GSWRDKSKERVMQLHVDRILQVMDFLKEVILERLGKSDVLDHCFERLTQFTLLFKKLNSVNESGFSYWFECTKQHFSLNI
TPLSVAQRFQAECEKKQASWIFTSATLSVKGKFDHFTELLGLQESQCLQLASPFDYAKQSLFVVPRLLPEPGTPGLADKL
VEQLAPVIRASKGRCFFLCTSHAMMNQLAAGFRQTLTFPVLLQGEKSKQALLDEFINHGNALLVATSSFWEGVDVRGQVL
SCVIIDKIPFTSPEEPLLKARMEDAQLKGKDPFAEVQLPQAVITFKQGVGRLIRAEKDKGVLIVCDTRLVTRKYGNLFLN
SLPCMPRTRSLDNAIDFLKTID

Sequences:

>Translated_662_residues
MIILSIQVEYRSSAFFIVESLTLISSFFSASGALSKQLPFFISRDAQIEMADAVTQAITKKQNLVVEAETGTGKTFAYLA
PALLTFDKASSEKIIISTGSKALQEQLFLKDLPLLMAATNFTGSVTVLKGRSNYLCNERLARFMLETKQREKALQIELIK
IKNWSLTSKTGDLAEIKDLAEDALIIPSITSNNDNCLGRECPSFDDCFIVKARKKAMDSDLVVINHHLFFADLAVKETGF
GELIPEAGVYIFDEAHQLPDIASLYFGESLSSRQLIELAKEIEFVYRTELREAKQMSKAADQLRLSALDFRMAFAIDKGT
GSWRDKSKERVMQLHVDRILQVMDFLKEVILERLGKSDVLDHCFERLTQFTLLFKKLNSVNESGFSYWFECTKQHFSLNI
TPLSVAQRFQAECEKKQASWIFTSATLSVKGKFDHFTELLGLQESQCLQLASPFDYAKQSLFVVPRLLPEPGTPGLADKL
VEQLAPVIRASKGRCFFLCTSHAMMNQLAAGFRQTLTFPVLLQGEKSKQALLDEFINHGNALLVATSSFWEGVDVRGQVL
SCVIIDKIPFTSPEEPLLKARMEDAQLKGKDPFAEVQLPQAVITFKQGVGRLIRAEKDKGVLIVCDTRLVTRKYGNLFLN
SLPCMPRTRSLDNAIDFLKTID
>Mature_662_residues
MIILSIQVEYRSSAFFIVESLTLISSFFSASGALSKQLPFFISRDAQIEMADAVTQAITKKQNLVVEAETGTGKTFAYLA
PALLTFDKASSEKIIISTGSKALQEQLFLKDLPLLMAATNFTGSVTVLKGRSNYLCNERLARFMLETKQREKALQIELIK
IKNWSLTSKTGDLAEIKDLAEDALIIPSITSNNDNCLGRECPSFDDCFIVKARKKAMDSDLVVINHHLFFADLAVKETGF
GELIPEAGVYIFDEAHQLPDIASLYFGESLSSRQLIELAKEIEFVYRTELREAKQMSKAADQLRLSALDFRMAFAIDKGT
GSWRDKSKERVMQLHVDRILQVMDFLKEVILERLGKSDVLDHCFERLTQFTLLFKKLNSVNESGFSYWFECTKQHFSLNI
TPLSVAQRFQAECEKKQASWIFTSATLSVKGKFDHFTELLGLQESQCLQLASPFDYAKQSLFVVPRLLPEPGTPGLADKL
VEQLAPVIRASKGRCFFLCTSHAMMNQLAAGFRQTLTFPVLLQGEKSKQALLDEFINHGNALLVATSSFWEGVDVRGQVL
SCVIIDKIPFTSPEEPLLKARMEDAQLKGKDPFAEVQLPQAVITFKQGVGRLIRAEKDKGVLIVCDTRLVTRKYGNLFLN
SLPCMPRTRSLDNAIDFLKTID

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=635, Percent_Identity=55.9055118110236, Blast_Score=717, Evalue=0.0,
Organism=Escherichia coli, GI1787018, Length=277, Percent_Identity=28.5198555956679, Blast_Score=102, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 74259; Mature: 74259

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILSIQVEYRSSAFFIVESLTLISSFFSASGALSKQLPFFISRDAQIEMADAVTQAITK
CEEEEEEEEECCCEEHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCHHHHHHHHHHHC
KQNLVVEAETGTGKTFAYLAPALLTFDKASSEKIIISTGSKALQEQLFLKDLPLLMAATN
CCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHEECC
FTGSVTVLKGRSNYLCNERLARFMLETKQREKALQIELIKIKNWSLTSKTGDLAEIKDLA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEECCCCCCHHHHHHHH
EDALIIPSITSNNDNCLGRECPSFDDCFIVKARKKAMDSDLVVINHHLFFADLAVKETGF
CCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCEEEEEEEEEEEEHHHCCCCC
GELIPEAGVYIFDEAHQLPDIASLYFGESLSSRQLIELAKEIEFVYRTELREAKQMSKAA
CCCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQLRLSALDFRMAFAIDKGTGSWRDKSKERVMQLHVDRILQVMDFLKEVILERLGKSDVL
HHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
DHCFERLTQFTLLFKKLNSVNESGFSYWFECTKQHFSLNITPLSVAQRFQAECEKKQASW
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHCCE
IFTSATLSVKGKFDHFTELLGLQESQCLQLASPFDYAKQSLFVVPRLLPEPGTPGLADKL
EEEEEEEEECCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHEEHHHHCCCCCCCCHHHHH
VEQLAPVIRASKGRCFFLCTSHAMMNQLAAGFRQTLTFPVLLQGEKSKQALLDEFINHGN
HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCC
ALLVATSSFWEGVDVRGQVLSCVIIDKIPFTSPEEPLLKARMEDAQLKGKDPFAEVQLPQ
EEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHCCCHH
AVITFKQGVGRLIRAEKDKGVLIVCDTRLVTRKYGNLFLNSLPCMPRTRSLDNAIDFLKT
HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ID
CC
>Mature Secondary Structure
MIILSIQVEYRSSAFFIVESLTLISSFFSASGALSKQLPFFISRDAQIEMADAVTQAITK
CEEEEEEEEECCCEEHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCHHHHHHHHHHHC
KQNLVVEAETGTGKTFAYLAPALLTFDKASSEKIIISTGSKALQEQLFLKDLPLLMAATN
CCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHEECC
FTGSVTVLKGRSNYLCNERLARFMLETKQREKALQIELIKIKNWSLTSKTGDLAEIKDLA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEECCCCCCHHHHHHHH
EDALIIPSITSNNDNCLGRECPSFDDCFIVKARKKAMDSDLVVINHHLFFADLAVKETGF
CCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCEEEEEEEEEEEEHHHCCCCC
GELIPEAGVYIFDEAHQLPDIASLYFGESLSSRQLIELAKEIEFVYRTELREAKQMSKAA
CCCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQLRLSALDFRMAFAIDKGTGSWRDKSKERVMQLHVDRILQVMDFLKEVILERLGKSDVL
HHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
DHCFERLTQFTLLFKKLNSVNESGFSYWFECTKQHFSLNITPLSVAQRFQAECEKKQASW
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHCCE
IFTSATLSVKGKFDHFTELLGLQESQCLQLASPFDYAKQSLFVVPRLLPEPGTPGLADKL
EEEEEEEEECCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHEEHHHHCCCCCCCCHHHHH
VEQLAPVIRASKGRCFFLCTSHAMMNQLAAGFRQTLTFPVLLQGEKSKQALLDEFINHGN
HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCC
ALLVATSSFWEGVDVRGQVLSCVIIDKIPFTSPEEPLLKARMEDAQLKGKDPFAEVQLPQ
EEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHCCCHH
AVITFKQGVGRLIRAEKDKGVLIVCDTRLVTRKYGNLFLNSLPCMPRTRSLDNAIDFLKT
HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ID
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]