| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945934
Identifier: 119945934
GI number: 119945934
Start: 2762576
End: 2763061
Strand: Reverse
Name: 119945934
Synonym: Ping_2274
Alternate gene names: NA
Gene position: 2763061-2762576 (Counterclockwise)
Preceding gene: 119945935
Following gene: 119945933
Centisome position: 60.6
GC content: 43.21
Gene sequence:
>486_bases ATGTTTTTTCTCATTGCTGTTAGCCTGATACTCTATGGTTTTCAACGATTCACAGCCTCACAACTTGTCGCTTTTATTGC AATAGCCATACCCATGGTCTCCTTTACGGGTTATGCCTATGGGCTTGATCACTTTTACGGTCAGATGTCGATTCTGACGG CATTCACAGGATTTTCTCTGGCAACCGCAACCCTGCTAATGACTGCCAAAACCGGGGCTGTAAAAGCGATTTTAAGCTCG CATATTGGCGGTAAAATAGCCAGGCTGCAAACAGCCGCAGGTTATATTATCCCAACCATACTCGGTTATCTGCTGATTGA ATCACTCCACTCTAGCGATGTGAATTTATTCGGTATTTTTGTGGTGACCATCTGTTGGTTTATTATATCAATGGTGAGTA TTTCGGCTATTCTTCAAGAAAAGATCGATATTGAGCGCTGGGAAGGAGAACGTTTACTTGCTCAGCCGCCATGTATGATC AATTGA
Upstream 100 bases:
>100_bases GTGATTCAAATATTTCCGCGTTGATAACCCCCTTTCAGCATCAGGTGCAGCTTGACCTGCAAATGGGGAAAGCAATGATA TGGGGAGCAAATCTGCCGCC
Downstream 100 bases:
>100_bases CTGGACTCTCAAACCGCAGAAAATTCATGGAATTTGGTCAAGAAGAGATTAAGCGCGCCCAACGTACTAAAAATAAACTT TGGCTTTTGATTTTGGATAT
Product: sensory transduction histidine kinase
Products: NA
Alternate protein names: Diguanylate Cyclase
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MFFLIAVSLILYGFQRFTASQLVAFIAIAIPMVSFTGYAYGLDHFYGQMSILTAFTGFSLATATLLMTAKTGAVKAILSS HIGGKIARLQTAAGYIIPTILGYLLIESLHSSDVNLFGIFVVTICWFIISMVSISAILQEKIDIERWEGERLLAQPPCMI N
Sequences:
>Translated_161_residues MFFLIAVSLILYGFQRFTASQLVAFIAIAIPMVSFTGYAYGLDHFYGQMSILTAFTGFSLATATLLMTAKTGAVKAILSS HIGGKIARLQTAAGYIIPTILGYLLIESLHSSDVNLFGIFVVTICWFIISMVSISAILQEKIDIERWEGERLLAQPPCMI N >Mature_161_residues MFFLIAVSLILYGFQRFTASQLVAFIAIAIPMVSFTGYAYGLDHFYGQMSILTAFTGFSLATATLLMTAKTGAVKAILSS HIGGKIARLQTAAGYIIPTILGYLLIESLHSSDVNLFGIFVVTICWFIISMVSISAILQEKIDIERWEGERLLAQPPCMI N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17624; Mature: 17624
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFLIAVSLILYGFQRFTASQLVAFIAIAIPMVSFTGYAYGLDHFYGQMSILTAFTGFSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATATLLMTAKTGAVKAILSSHIGGKIARLQTAAGYIIPTILGYLLIESLHSSDVNLFGIF HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VVTICWFIISMVSISAILQEKIDIERWEGERLLAQPPCMIN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFFLIAVSLILYGFQRFTASQLVAFIAIAIPMVSFTGYAYGLDHFYGQMSILTAFTGFSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATATLLMTAKTGAVKAILSSHIGGKIARLQTAAGYIIPTILGYLLIESLHSSDVNLFGIF HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VVTICWFIISMVSISAILQEKIDIERWEGERLLAQPPCMIN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA