| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is yejL [C]
Identifier: 119945928
GI number: 119945928
Start: 2753647
End: 2753877
Strand: Direct
Name: yejL [C]
Synonym: Ping_2268
Alternate gene names: 119945928
Gene position: 2753647-2753877 (Clockwise)
Preceding gene: 119945922
Following gene: 119945929
Centisome position: 60.39
GC content: 32.9
Gene sequence:
>231_bases GTGACTATGCCAATTATTTCTAAATATTCAAACAAAAAGATCGAAACAATACTTGATGAAGTAATGGAAGTTCTTCATCA AAATGATGTTTCTGTCGATTTAAGTTTAATGGTATTAGGCAACGCCATCACGCACGTCATTAATAGTCAGGTTCCAGTTG ACAAACGTGCACAAATCAGCGAAAAATTTGTCAAAGCACTTTCGGTTTCGATTAATTCTAAAGAAAAATAA
Upstream 100 bases:
>100_bases ATTTCTATTCACTGTATAAAAATAAAAACAAGCGACCTTAAGTGATTGGTATAATTGATAGAGTAAGTTATTATCACATT TTTTACTTTAAAGTGAGCCA
Downstream 100 bases:
>100_bases AGAATATGGTAGAAACAGGTAATAAATTCCATGATAAAGTTTCCAGCTTAATAAACTGGGGGCATTGGTTTACTTTTTTT AATATAATCATTGTGTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTMPIISKYSNKKIETILDEVMEVLHQNDVSVDLSLMVLGNAITHVINSQVPVDKRAQISEKFVKALSVSINSKEK
Sequences:
>Translated_76_residues MTMPIISKYSNKKIETILDEVMEVLHQNDVSVDLSLMVLGNAITHVINSQVPVDKRAQISEKFVKALSVSINSKEK >Mature_75_residues TMPIISKYSNKKIETILDEVMEVLHQNDVSVDLSLMVLGNAITHVINSQVPVDKRAQISEKFVKALSVSINSKEK
Specific function: Unknown
COG id: COG3082
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0352 family [H]
Homologues:
Organism=Escherichia coli, GI1788514, Length=70, Percent_Identity=44.2857142857143, Blast_Score=67, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009857 - InterPro: IPR023202 - ProDom: PD027794 [H]
Pfam domain/function: PF07208 DUF1414 [H]
EC number: NA
Molecular weight: Translated: 8497; Mature: 8366
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPIISKYSNKKIETILDEVMEVLHQNDVSVDLSLMVLGNAITHVINSQVPVDKRAQIS CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH EKFVKALSVSINSKEK HHHHHHHHHCCCCCCC >Mature Secondary Structure TMPIISKYSNKKIETILDEVMEVLHQNDVSVDLSLMVLGNAITHVINSQVPVDKRAQIS CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH EKFVKALSVSINSKEK HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA