| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is yejM [H]
Identifier: 119945929
GI number: 119945929
Start: 2753883
End: 2755670
Strand: Direct
Name: yejM [H]
Synonym: Ping_2269
Alternate gene names: 119945929
Gene position: 2753883-2755670 (Clockwise)
Preceding gene: 119945928
Following gene: 119945930
Centisome position: 60.4
GC content: 36.02
Gene sequence:
>1788_bases ATGGTAGAAACAGGTAATAAATTCCATGATAAAGTTTCCAGCTTAATAAACTGGGGGCATTGGTTTACTTTTTTTAATAT AATCATTGTGTCCCTTATAGGTTTACGATATATCGCCTATGCAGGTATGGCGGATTCCTTTGCCGGTATTATTTATCAAT TTATTAGTTTAATTGGGCATTTTAGTTTTCTTTGTGCAGCTGTCTTTATGCTGATTTTATTCCCCTTGGCATTTTTAATC CCTTTCCCGCGTTTATACCGGATTATTGCTATTTTTATCAGTACCATCTTGATCACTTTTTTAATTATTGATACGCAAAT ATTCAAAATTTATAATTTTCACCTTAACCCTTTAATTTGGCATTTTTTACAAAGTCCCTCTCAAGTCGAGCAAATTTATA CAATTAACCTGCATTACATCTCGATTCCGATTATCTTTATTATTGAACTATTTGTTTCCTATTTTGTATGGAAAAAATGC CGTAAATTACAGGCTAAACGTATTGGTAAACCTATTGCAGTTGTACTGTTTAGCGCCTTTGTTATTACGCATTTAACGTT TATATGGGCGGATGCAAAGCAATATCGTCCCATTACCCAACAAAAAGCAACCTACCCACTCTCCTATCCAATGACGGCAC GTACTTTTTTGAAAAATCAGGGCTGGTTAAGTGAGAATAAGTTACATGAGCGTATCAGTCGCCAGAGTAATGAGTTTAAA AATGAATTACGTTATCCGATAACGCCATTAACTTTCCAGACAACAAAATCTGCGCAAAATATTTTATTAGTGACCGTTGA AGCCTTACGCGCAGACATGTTAAATGAACAAAACATGCCCAAGCTTTATAAGCTTAGCCAACAGGGATTAAATTTCAAAA ACCATTACAGTGGTGCGAGTAATCGGGCTCAAGGTATTTTTAGCTTATTTTATGCTTTGCCAAATAATTACTGGTCAGAT ATAACGCTTAATTATATCCCCCCCGTGTTACTAACCCGTTTACAACAACAGCACTATCAGTTTGGCTTATTTTCAAGTAT TGGCTTCAATCAACCCGAGTTTTTACAGAGCAGTTTCAGCAACTTAAAAACAGAGCATTTAAAAAATGCGAATGCAGAAA ATGGTAATCAGAAGATCACCAAAGAATGGTCTCAGTGGTTAAATCTGCAAAATGACACAAACAGCTGGTTCAGTTTTTTA TACTATGAACAACCGGATAAATCGTTTTTACATAACACTGATCATGTCAGTTTTATGGATCACACCAAAAAACTTGCCTT ATATCAAAAACAAGTATTAACCATTGATCAACAGATAGCTCAAATAATAAAAGCCCTGAAAAGCAAAAACCAACTGGAAA ATACGATCGTTATTATTACCGGAACGCATGCCGTGTCTTTCGCAAAAAACAGTTCTGCACAAAGCGCGATCAGCGATGCA CATGTCCCACTGGTGATCTTATGGCCAGGTGAAAATGCCGGTCAAATTTCTCGCATGACAAGCCATTTAGATATTGTCCC GACCTTGATGGAAAAATCTTTAGGCGGCCAATCTAATGCCAATTTGTATAGCAGTGGACAAAGTTTATTTGATGAGAGTG AACGTCAGTTTTTATTGTCAGGGGATTTAAACAAATATGTAGTGTACGAAAAAGAAAGAATCACTCAATTTTCAGATGAT GGTGAAGTCAATAGTATAGATTGGAATGCTAATCCGCTTGCCGAGGATAAAGATGATGTCACCTTATTGATTAAGGTTGT ATCACAGTTACGCCGTTTTAATCGTTAG
Upstream 100 bases:
>100_bases TCATTAATAGTCAGGTTCCAGTTGACAAACGTGCACAAATCAGCGAAAAATTTGTCAAAGCACTTTCGGTTTCGATTAAT TCTAAAGAAAAATAAAGAAT
Downstream 100 bases:
>100_bases TTGTTAATAATGGGCGCAGGAAAATAAATAAGAGCAAGGCGTTTAATTGAGTGGAAAGAAATGACGTTATACCAATTCCA CTAATTAAGTGATCTGTTTA
Product: sulfatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MVETGNKFHDKVSSLINWGHWFTFFNIIIVSLIGLRYIAYAGMADSFAGIIYQFISLIGHFSFLCAAVFMLILFPLAFLI PFPRLYRIIAIFISTILITFLIIDTQIFKIYNFHLNPLIWHFLQSPSQVEQIYTINLHYISIPIIFIIELFVSYFVWKKC RKLQAKRIGKPIAVVLFSAFVITHLTFIWADAKQYRPITQQKATYPLSYPMTARTFLKNQGWLSENKLHERISRQSNEFK NELRYPITPLTFQTTKSAQNILLVTVEALRADMLNEQNMPKLYKLSQQGLNFKNHYSGASNRAQGIFSLFYALPNNYWSD ITLNYIPPVLLTRLQQQHYQFGLFSSIGFNQPEFLQSSFSNLKTEHLKNANAENGNQKITKEWSQWLNLQNDTNSWFSFL YYEQPDKSFLHNTDHVSFMDHTKKLALYQKQVLTIDQQIAQIIKALKSKNQLENTIVIITGTHAVSFAKNSSAQSAISDA HVPLVILWPGENAGQISRMTSHLDIVPTLMEKSLGGQSNANLYSSGQSLFDESERQFLLSGDLNKYVVYEKERITQFSDD GEVNSIDWNANPLAEDKDDVTLLIKVVSQLRRFNR
Sequences:
>Translated_595_residues MVETGNKFHDKVSSLINWGHWFTFFNIIIVSLIGLRYIAYAGMADSFAGIIYQFISLIGHFSFLCAAVFMLILFPLAFLI PFPRLYRIIAIFISTILITFLIIDTQIFKIYNFHLNPLIWHFLQSPSQVEQIYTINLHYISIPIIFIIELFVSYFVWKKC RKLQAKRIGKPIAVVLFSAFVITHLTFIWADAKQYRPITQQKATYPLSYPMTARTFLKNQGWLSENKLHERISRQSNEFK NELRYPITPLTFQTTKSAQNILLVTVEALRADMLNEQNMPKLYKLSQQGLNFKNHYSGASNRAQGIFSLFYALPNNYWSD ITLNYIPPVLLTRLQQQHYQFGLFSSIGFNQPEFLQSSFSNLKTEHLKNANAENGNQKITKEWSQWLNLQNDTNSWFSFL YYEQPDKSFLHNTDHVSFMDHTKKLALYQKQVLTIDQQIAQIIKALKSKNQLENTIVIITGTHAVSFAKNSSAQSAISDA HVPLVILWPGENAGQISRMTSHLDIVPTLMEKSLGGQSNANLYSSGQSLFDESERQFLLSGDLNKYVVYEKERITQFSDD GEVNSIDWNANPLAEDKDDVTLLIKVVSQLRRFNR >Mature_595_residues MVETGNKFHDKVSSLINWGHWFTFFNIIIVSLIGLRYIAYAGMADSFAGIIYQFISLIGHFSFLCAAVFMLILFPLAFLI PFPRLYRIIAIFISTILITFLIIDTQIFKIYNFHLNPLIWHFLQSPSQVEQIYTINLHYISIPIIFIIELFVSYFVWKKC RKLQAKRIGKPIAVVLFSAFVITHLTFIWADAKQYRPITQQKATYPLSYPMTARTFLKNQGWLSENKLHERISRQSNEFK NELRYPITPLTFQTTKSAQNILLVTVEALRADMLNEQNMPKLYKLSQQGLNFKNHYSGASNRAQGIFSLFYALPNNYWSD ITLNYIPPVLLTRLQQQHYQFGLFSSIGFNQPEFLQSSFSNLKTEHLKNANAENGNQKITKEWSQWLNLQNDTNSWFSFL YYEQPDKSFLHNTDHVSFMDHTKKLALYQKQVLTIDQQIAQIIKALKSKNQLENTIVIITGTHAVSFAKNSSAQSAISDA HVPLVILWPGENAGQISRMTSHLDIVPTLMEKSLGGQSNANLYSSGQSLFDESERQFLLSGDLNKYVVYEKERITQFSDD GEVNSIDWNANPLAEDKDDVTLLIKVVSQLRRFNR
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0842 [H]
Homologues:
Organism=Escherichia coli, GI1788515, Length=597, Percent_Identity=33.8358458961474, Blast_Score=390, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 68696; Mature: 68696
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVETGNKFHDKVSSLINWGHWFTFFNIIIVSLIGLRYIAYAGMADSFAGIIYQFISLIGH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FSFLCAAVFMLILFPLAFLIPFPRLYRIIAIFISTILITFLIIDTQIFKIYNFHLNPLIW HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH HFLQSPSQVEQIYTINLHYISIPIIFIIELFVSYFVWKKCRKLQAKRIGKPIAVVLFSAF HHHCCHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VITHLTFIWADAKQYRPITQQKATYPLSYPMTARTFLKNQGWLSENKLHERISRQSNEFK HHHHHHHHHHCHHHCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH NELRYPITPLTFQTTKSAQNILLVTVEALRADMLNEQNMPKLYKLSQQGLNFKNHYSGAS HHCCCCCCCEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHCCCCC NRAQGIFSLFYALPNNYWSDITLNYIPPVLLTRLQQQHYQFGLFSSIGFNQPEFLQSSFS HHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHH NLKTEHLKNANAENGNQKITKEWSQWLNLQNDTNSWFSFLYYEQPDKSFLHNTDHVSFMD HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHEEEEEECCCHHHHCCCCCCHHHH HTKKLALYQKQVLTIDQQIAQIIKALKSKNQLENTIVIITGTHAVSFAKNSSAQSAISDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCHHHHHHCC HVPLVILWPGENAGQISRMTSHLDIVPTLMEKSLGGQSNANLYSSGQSLFDESERQFLLS CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCEEEEC GDLNKYVVYEKERITQFSDDGEVNSIDWNANPLAEDKDDVTLLIKVVSQLRRFNR CCCCCEEEEEHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVETGNKFHDKVSSLINWGHWFTFFNIIIVSLIGLRYIAYAGMADSFAGIIYQFISLIGH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FSFLCAAVFMLILFPLAFLIPFPRLYRIIAIFISTILITFLIIDTQIFKIYNFHLNPLIW HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH HFLQSPSQVEQIYTINLHYISIPIIFIIELFVSYFVWKKCRKLQAKRIGKPIAVVLFSAF HHHCCHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VITHLTFIWADAKQYRPITQQKATYPLSYPMTARTFLKNQGWLSENKLHERISRQSNEFK HHHHHHHHHHCHHHCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH NELRYPITPLTFQTTKSAQNILLVTVEALRADMLNEQNMPKLYKLSQQGLNFKNHYSGAS HHCCCCCCCEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHCCCCC NRAQGIFSLFYALPNNYWSDITLNYIPPVLLTRLQQQHYQFGLFSSIGFNQPEFLQSSFS HHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHH NLKTEHLKNANAENGNQKITKEWSQWLNLQNDTNSWFSFLYYEQPDKSFLHNTDHVSFMD HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHEEEEEECCCHHHHCCCCCCHHHH HTKKLALYQKQVLTIDQQIAQIIKALKSKNQLENTIVIITGTHAVSFAKNSSAQSAISDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCHHHHHHCC HVPLVILWPGENAGQISRMTSHLDIVPTLMEKSLGGQSNANLYSSGQSLFDESERQFLLS CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCEEEEC GDLNKYVVYEKERITQFSDDGEVNSIDWNANPLAEDKDDVTLLIKVVSQLRRFNR CCCCCEEEEEHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]