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The map label for this gene is ycfF [C]

Identifier: 119945925

GI number: 119945925

Start: 2751028

End: 2751378

Strand: Reverse

Name: ycfF [C]

Synonym: Ping_2265

Alternate gene names: 119945925

Gene position: 2751378-2751028 (Counterclockwise)

Preceding gene: 119945926

Following gene: 119945924

Centisome position: 60.34

GC content: 39.6

Gene sequence:

>351_bases
ATGGCAGAAGAAACCATTTTTAGAAAAATCATTAATAAAGAGATCCCCTCGGAATTGCTTTATCAAGATGAGTTCGTGAC
GGCCTTTAGAGATATCAACCCTCAGGCACCAACGCATATTTTAATTATTCCGAATAAACTCATTGCCACTGCTAATGAGA
TAGAAATAGAAGATGAGCTGCTAATTGGTAAATTGTATACGGTGGCAAAAAAATTGGCAAAACAGGAGGGGATTGCAGAA
TCCGGGTACCGTTTAATTATGAACTGTAATCAAGACGGTGGTCAGGAGGTATATCATATACATCTGCACCTGTTGGGCGG
AAAACCGCTTGGAAAGTTGATTTCTTGCTGA

Upstream 100 bases:

>100_bases
GGGTAAAGGCGCGATTTCAGAACGGTAATAATAGCGTTGTAATAAGGCATTTTTGATTTTAACCGGTAGAAAAACAGCTA
ATTAACTTAAGGGAAATATG

Downstream 100 bases:

>100_bases
AAAATAACTGTTTAATGCCTATAATCGGGCAGAGTTTAATCTAAAAGGATGGGTCAACAATGAAAACACAAAAAAATCTA
TGGGCAGCCTTGGCGGTTAC

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAEETIFRKIINKEIPSELLYQDEFVTAFRDINPQAPTHILIIPNKLIATANEIEIEDELLIGKLYTVAKKLAKQEGIAE
SGYRLIMNCNQDGGQEVYHIHLHLLGGKPLGKLISC

Sequences:

>Translated_116_residues
MAEETIFRKIINKEIPSELLYQDEFVTAFRDINPQAPTHILIIPNKLIATANEIEIEDELLIGKLYTVAKKLAKQEGIAE
SGYRLIMNCNQDGGQEVYHIHLHLLGGKPLGKLISC
>Mature_115_residues
AEETIFRKIINKEIPSELLYQDEFVTAFRDINPQAPTHILIIPNKLIATANEIEIEDELLIGKLYTVAKKLAKQEGIAES
GYRLIMNCNQDGGQEVYHIHLHLLGGKPLGKLISC

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=107, Percent_Identity=50.4672897196262, Blast_Score=115, Evalue=8e-27,
Organism=Homo sapiens, GI14211923, Length=109, Percent_Identity=47.7064220183486, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1787346, Length=115, Percent_Identity=68.695652173913, Blast_Score=157, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17506713, Length=109, Percent_Identity=47.7064220183486, Blast_Score=113, Evalue=2e-26,
Organism=Drosophila melanogaster, GI28574010, Length=109, Percent_Identity=47.7064220183486, Blast_Score=111, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24581222, Length=109, Percent_Identity=47.7064220183486, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 13056; Mature: 12925

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEETIFRKIINKEIPSELLYQDEFVTAFRDINPQAPTHILIIPNKLIATANEIEIEDEL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCCCHHH
LIGKLYTVAKKLAKQEGIAESGYRLIMNCNQDGGQEVYHIHLHLLGGKPLGKLISC
HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCHHHHCCC
>Mature Secondary Structure 
AEETIFRKIINKEIPSELLYQDEFVTAFRDINPQAPTHILIIPNKLIATANEIEIEDEL
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCCCHHH
LIGKLYTVAKKLAKQEGIAESGYRLIMNCNQDGGQEVYHIHLHLLGGKPLGKLISC
HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]