| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945926
Identifier: 119945926
GI number: 119945926
Start: 2751451
End: 2752320
Strand: Reverse
Name: 119945926
Synonym: Ping_2266
Alternate gene names: NA
Gene position: 2752320-2751451 (Counterclockwise)
Preceding gene: 119945927
Following gene: 119945925
Centisome position: 60.36
GC content: 37.82
Gene sequence:
>870_bases ATGAAATTATTTGTACGTGATTTAACGGTTATCGATGCGTCATATTTAGATAAAAATCGAGGTTTTGTCGGTGAAAGTTA TTTAGTGGATGTTATATTAACAGGGGCGCTTAATGAGCAATCCATGGTCCTTGATTTCTCATTGGTAAAAAAACAGATTA AAACTATTATTGATGCCGAAGTAGATCATAAATTATTGTTACCACAGTCAGCAGATAATTGCACTGTCACTCCAGAGGGC CATAGAACACAAGTTAATTTCGAACTCGGTGATAGTGACGTTATACAATTAAACTGTCCAAATGAAGCCTATTGTTTACT GGAAAGCAAAACCGTTTCTATTGAAGTATTAGAGACTTATCTTGAGCAAATTATTCTGCCGCAGTTACCTGAAAACGTAT TGGGGCTTGACATTAAATTACGTAGTGAAAATATTACCACTCCCTATTACCATTACACGCATGGATTAAAAAAACATAAG GGTAACTGTCAGCGTATTGCTCATGGGCACCGTTCTAAAATCGATATATTTATTGATGATAAATACAGTGAAGCGCTGGC AGAAGAATGGGCTAAACGTTGGCAGGATATCTACCTGGTCAGTGCTGAAGATATTATTACAGAATCAGACTTGTCTTTTC TTGTAGCAGGAAAAAATAATAGTGCTGAAATATACACCGCTTACGACGCGGTACAAGGTTATTTTGAGCTGCTTATACCG GCAGGGCGCGCTGAAGTTTTACCCAATGATACAACAGTAGAATCTCTCTCTGAATTTATTTGTGAACAGATAAAAGCCCG GATGGGTGATAAAAAAGTCACTGTGTATGCTTATGAAGGCGTGGGTAAAGGCGCGATTTCAGAACGGTAA
Upstream 100 bases:
>100_bases AAAGCGCTTTGTTGTATTGTTACAATAATATTAACGAAAATAGGCATAAAGTCGGCAAGAAAATACAGATTTTGATTGTC GTTTATTGAATGAGGATAGA
Downstream 100 bases:
>100_bases TAATAGCGTTGTAATAAGGCATTTTTGATTTTAACCGGTAGAAAAACAGCTAATTAACTTAAGGGAAATATGATGGCAGA AGAAACCATTTTTAGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKLFVRDLTVIDASYLDKNRGFVGESYLVDVILTGALNEQSMVLDFSLVKKQIKTIIDAEVDHKLLLPQSADNCTVTPEG HRTQVNFELGDSDVIQLNCPNEAYCLLESKTVSIEVLETYLEQIILPQLPENVLGLDIKLRSENITTPYYHYTHGLKKHK GNCQRIAHGHRSKIDIFIDDKYSEALAEEWAKRWQDIYLVSAEDIITESDLSFLVAGKNNSAEIYTAYDAVQGYFELLIP AGRAEVLPNDTTVESLSEFICEQIKARMGDKKVTVYAYEGVGKGAISER
Sequences:
>Translated_289_residues MKLFVRDLTVIDASYLDKNRGFVGESYLVDVILTGALNEQSMVLDFSLVKKQIKTIIDAEVDHKLLLPQSADNCTVTPEG HRTQVNFELGDSDVIQLNCPNEAYCLLESKTVSIEVLETYLEQIILPQLPENVLGLDIKLRSENITTPYYHYTHGLKKHK GNCQRIAHGHRSKIDIFIDDKYSEALAEEWAKRWQDIYLVSAEDIITESDLSFLVAGKNNSAEIYTAYDAVQGYFELLIP AGRAEVLPNDTTVESLSEFICEQIKARMGDKKVTVYAYEGVGKGAISER >Mature_289_residues MKLFVRDLTVIDASYLDKNRGFVGESYLVDVILTGALNEQSMVLDFSLVKKQIKTIIDAEVDHKLLLPQSADNCTVTPEG HRTQVNFELGDSDVIQLNCPNEAYCLLESKTVSIEVLETYLEQIILPQLPENVLGLDIKLRSENITTPYYHYTHGLKKHK GNCQRIAHGHRSKIDIFIDDKYSEALAEEWAKRWQDIYLVSAEDIITESDLSFLVAGKNNSAEIYTAYDAVQGYFELLIP AGRAEVLPNDTTVESLSEFICEQIKARMGDKKVTVYAYEGVGKGAISER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32544; Mature: 32544
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFVRDLTVIDASYLDKNRGFVGESYLVDVILTGALNEQSMVLDFSLVKKQIKTIIDAE CEEEEEHEEEEEHHHHHCCCCCCCHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCC VDHKLLLPQSADNCTVTPEGHRTQVNFELGDSDVIQLNCPNEAYCLLESKTVSIEVLETY CCCEEECCCCCCCCEECCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCEEEHHHHHHH LEQIILPQLPENVLGLDIKLRSENITTPYYHYTHGLKKHKGNCQRIAHGHRSKIDIFIDD HHHHHCCCCCCCHHEEEEEECCCCCCCCCHHHHCCHHHCCCCHHHHHCCCCCEEEEEEEC KYSEALAEEWAKRWQDIYLVSAEDIITESDLSFLVAGKNNSAEIYTAYDAVQGYFELLIP CHHHHHHHHHHHHHHEEEEEEHHHHEECCCCEEEEECCCCCCEEEEHHHHHHHHHHHHCC AGRAEVLPNDTTVESLSEFICEQIKARMGDKKVTVYAYEGVGKGAISER CCCCEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MKLFVRDLTVIDASYLDKNRGFVGESYLVDVILTGALNEQSMVLDFSLVKKQIKTIIDAE CEEEEEHEEEEEHHHHHCCCCCCCHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCC VDHKLLLPQSADNCTVTPEGHRTQVNFELGDSDVIQLNCPNEAYCLLESKTVSIEVLETY CCCEEECCCCCCCCEECCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCEEEHHHHHHH LEQIILPQLPENVLGLDIKLRSENITTPYYHYTHGLKKHKGNCQRIAHGHRSKIDIFIDD HHHHHCCCCCCCHHEEEEEECCCCCCCCCHHHHCCHHHCCCCHHHHHCCCCCEEEEEEEC KYSEALAEEWAKRWQDIYLVSAEDIITESDLSFLVAGKNNSAEIYTAYDAVQGYFELLIP CHHHHHHHHHHHHHHEEEEEEHHHHEECCCCEEEEECCCCCCEEEEHHHHHHHHHHHHCC AGRAEVLPNDTTVESLSEFICEQIKARMGDKKVTVYAYEGVGKGAISER CCCCEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA