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The map label for this gene is ycbC [H]

Identifier: 119945885

GI number: 119945885

Start: 2708519

End: 2709283

Strand: Direct

Name: ycbC [H]

Synonym: Ping_2225

Alternate gene names: 119945885

Gene position: 2708519-2709283 (Clockwise)

Preceding gene: 119945884

Following gene: 119945893

Centisome position: 59.4

GC content: 38.69

Gene sequence:

>765_bases
ATGTTATTTATTTTAAAAAAATGGATTGGCTCTTTGCTGATGCCGCTGCCGATAGTATTAATGCTTTTTTTGTTCGCACT
TATTTTACTGTTTTTCACACAAAGACAGAAACTCGCTAAATTTAATTTATTAGTGAGTTTTATCCTTTTATTTTTATTGA
GTTTTATGCCCGTGTCCGAACAACTGGTGCAGCCATTAGAACGTCAATATCCGCCTGTGATGCAGCCGGCACAGAACTTC
AAATATATTTTAGTATTAGGCTCGGGCGGTATTGCAGATCCAAGTTTACCCGTAACGGGGCAATTATCAGCAGTGGCATT
AAGTCGATTCGTTGAAGCGTTGCGTTTGTATCACGCAAATCCAAATGCAACTCTGGTGGTTTCCGGTGGTAATTTTGGAG
ATATAAAATCTCACGCATTGTTAATGCAGGAATTGGCAATGGCAATGAATATTCCTAAAGATAACATTATCCGCCTAGAT
AATACCTTAGATACCGATGACGAAGCCAAACAGATGTCGAAAATCATCAAAGGGCAATCAGCTGTTTTGGTAACTTCTGC
GACGCATATGCCACGCTCAATGGGACTTTTTAAGCAATATAATGCATTTCCCACCCCTGCGCCGGCTGACTATTTAGCCA
AAAAACGCGAAGGTGAAACGCCTTATTATTATTATATTCCCTCATCTAACTACCTTGATAAAACAAAAGTTGCCTGGCAT
GAATATCTTGGAAAATTACAAAATATAATCACAGAGCAGCTTTAA

Upstream 100 bases:

>100_bases
TAATTTATTTATAAAATAATCTGTTTCTAAAATAATGCGTCTTTAATTTTACAGTTTACATTATTTCACCCCCTATCTTT
TAAAAAAGCGAGTTAACAAA

Downstream 100 bases:

>100_bases
AAATCAAAAAAAAGATAAGCATTGCTTATCTTTTTTAAACTTATTGCCTTAAGAGTGAAATTTATAATAATGGTGCATTT
TACTTAACAACTACCTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLFILKKWIGSLLMPLPIVLMLFLFALILLFFTQRQKLAKFNLLVSFILLFLLSFMPVSEQLVQPLERQYPPVMQPAQNF
KYILVLGSGGIADPSLPVTGQLSAVALSRFVEALRLYHANPNATLVVSGGNFGDIKSHALLMQELAMAMNIPKDNIIRLD
NTLDTDDEAKQMSKIIKGQSAVLVTSATHMPRSMGLFKQYNAFPTPAPADYLAKKREGETPYYYYIPSSNYLDKTKVAWH
EYLGKLQNIITEQL

Sequences:

>Translated_254_residues
MLFILKKWIGSLLMPLPIVLMLFLFALILLFFTQRQKLAKFNLLVSFILLFLLSFMPVSEQLVQPLERQYPPVMQPAQNF
KYILVLGSGGIADPSLPVTGQLSAVALSRFVEALRLYHANPNATLVVSGGNFGDIKSHALLMQELAMAMNIPKDNIIRLD
NTLDTDDEAKQMSKIIKGQSAVLVTSATHMPRSMGLFKQYNAFPTPAPADYLAKKREGETPYYYYIPSSNYLDKTKVAWH
EYLGKLQNIITEQL
>Mature_254_residues
MLFILKKWIGSLLMPLPIVLMLFLFALILLFFTQRQKLAKFNLLVSFILLFLLSFMPVSEQLVQPLERQYPPVMQPAQNF
KYILVLGSGGIADPSLPVTGQLSAVALSRFVEALRLYHANPNATLVVSGGNFGDIKSHALLMQELAMAMNIPKDNIIRLD
NTLDTDDEAKQMSKIIKGQSAVLVTSATHMPRSMGLFKQYNAFPTPAPADYLAKKREGETPYYYYIPSSNYLDKTKVAWH
EYLGKLQNIITEQL

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=247, Percent_Identity=36.0323886639676, Blast_Score=124, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28616; Mature: 28616

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFILKKWIGSLLMPLPIVLMLFLFALILLFFTQRQKLAKFNLLVSFILLFLLSFMPVSE
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QLVQPLERQYPPVMQPAQNFKYILVLGSGGIADPSLPVTGQLSAVALSRFVEALRLYHAN
HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PNATLVVSGGNFGDIKSHALLMQELAMAMNIPKDNIIRLDNTLDTDDEAKQMSKIIKGQS
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCC
AVLVTSATHMPRSMGLFKQYNAFPTPAPADYLAKKREGETPYYYYIPSSNYLDKTKVAWH
EEEEEECHHCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH
EYLGKLQNIITEQL
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLFILKKWIGSLLMPLPIVLMLFLFALILLFFTQRQKLAKFNLLVSFILLFLLSFMPVSE
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QLVQPLERQYPPVMQPAQNFKYILVLGSGGIADPSLPVTGQLSAVALSRFVEALRLYHAN
HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PNATLVVSGGNFGDIKSHALLMQELAMAMNIPKDNIIRLDNTLDTDDEAKQMSKIIKGQS
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCC
AVLVTSATHMPRSMGLFKQYNAFPTPAPADYLAKKREGETPYYYYIPSSNYLDKTKVAWH
EEEEEECHHCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH
EYLGKLQNIITEQL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]