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The map label for this gene is yccA [H]

Identifier: 119945860

GI number: 119945860

Start: 2676693

End: 2677352

Strand: Direct

Name: yccA [H]

Synonym: Ping_2200

Alternate gene names: 119945860

Gene position: 2676693-2677352 (Clockwise)

Preceding gene: 119945859

Following gene: 119945864

Centisome position: 58.7

GC content: 36.97

Gene sequence:

>660_bases
ATGAATTCACCGATCACTAATACCCGCTCAAAGAGCCATGGTATTGAAATTAATAAAGTACTTAGAAATACCTATATGTT
GTTGGCTATGACGCTGGCGTTTTCTGCTTTAACGGCAACGTTAGCAACGATGATGCAAATTGGTCCAACCGCATCTTTAG
TGCTTATGCTTGTGGGTTTTGGCACATTATTTATCGTATCTAAAAATGCAAATTCCAGTAAAGGGATCTTTTGGGTCTTC
ATCTTTACCGGCGTAATGGGCGCATCACTGGGTAATATGCTAAACCATTATTTAGCAATGGAAAATGGCGCAGCACTTAT
AATGCAGGCACTAGGTTCAACTGCTATTATTTTCTTTGCCCTGTCAGCTTATGTATTAACAACGCGCAAAGATTTTTCAT
TTATGGGCGGCTTTTTAATGGCGGGTATGATTGCTGTTATTATCGCAATGGTTGCAAATATCTTTTTACAAATACCCTTG
ATGCAAGTTGTCATTAGCAGTGTTGTTGTCTTAATTATGTCCGGCATGATCCTTTTTGATACGAGTCGTATTATCAACGG
TGGAGAGACTAATTACATCAATGCAACCGTATCGTTATTCTTAAACTTATTTAATATGTTTATTCATCTACTGGTTTTAT
TAAACATTTTAGATGACTAA

Upstream 100 bases:

>100_bases
GTAGGCAGCTATTTATTGTAACTATTAGAAAAAATAGCGCATTTAATCAATGCCGTGCTATTATCAAATAAGATTTTTTT
TGAAGAACTTGGAGATAAAA

Downstream 100 bases:

>100_bases
TTATTTCTTATTTAAAAGAAAAAACGCACTCTGAGTGCGTTTTTTTATATCTGAATTTCAGGATGATATAGCGACGCTCT
GTATTTTTATCTTATCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNSPITNTRSKSHGIEINKVLRNTYMLLAMTLAFSALTATLATMMQIGPTASLVLMLVGFGTLFIVSKNANSSKGIFWVF
IFTGVMGASLGNMLNHYLAMENGAALIMQALGSTAIIFFALSAYVLTTRKDFSFMGGFLMAGMIAVIIAMVANIFLQIPL
MQVVISSVVVLIMSGMILFDTSRIINGGETNYINATVSLFLNLFNMFIHLLVLLNILDD

Sequences:

>Translated_219_residues
MNSPITNTRSKSHGIEINKVLRNTYMLLAMTLAFSALTATLATMMQIGPTASLVLMLVGFGTLFIVSKNANSSKGIFWVF
IFTGVMGASLGNMLNHYLAMENGAALIMQALGSTAIIFFALSAYVLTTRKDFSFMGGFLMAGMIAVIIAMVANIFLQIPL
MQVVISSVVVLIMSGMILFDTSRIINGGETNYINATVSLFLNLFNMFIHLLVLLNILDD
>Mature_219_residues
MNSPITNTRSKSHGIEINKVLRNTYMLLAMTLAFSALTATLATMMQIGPTASLVLMLVGFGTLFIVSKNANSSKGIFWVF
IFTGVMGASLGNMLNHYLAMENGAALIMQALGSTAIIFFALSAYVLTTRKDFSFMGGFLMAGMIAVIIAMVANIFLQIPL
MQVVISSVVVLIMSGMILFDTSRIINGGETNYINATVSLFLNLFNMFIHLLVLLNILDD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=216, Percent_Identity=52.7777777777778, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 23744; Mature: 23744

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPITNTRSKSHGIEINKVLRNTYMLLAMTLAFSALTATLATMMQIGPTASLVLMLVGF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GTLFIVSKNANSSKGIFWVFIFTGVMGASLGNMLNHYLAMENGAALIMQALGSTAIIFFA
HHEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHH
LSAYVLTTRKDFSFMGGFLMAGMIAVIIAMVANIFLQIPLMQVVISSVVVLIMSGMILFD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEE
TSRIINGGETNYINATVSLFLNLFNMFIHLLVLLNILDD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSPITNTRSKSHGIEINKVLRNTYMLLAMTLAFSALTATLATMMQIGPTASLVLMLVGF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GTLFIVSKNANSSKGIFWVFIFTGVMGASLGNMLNHYLAMENGAALIMQALGSTAIIFFA
HHEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHH
LSAYVLTTRKDFSFMGGFLMAGMIAVIIAMVANIFLQIPLMQVVISSVVVLIMSGMILFD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEE
TSRIINGGETNYINATVSLFLNLFNMFIHLLVLLNILDD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]