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The map label for this gene is dinF [C]

Identifier: 119945851

GI number: 119945851

Start: 2665511

End: 2666839

Strand: Direct

Name: dinF [C]

Synonym: Ping_2191

Alternate gene names: 119945851

Gene position: 2665511-2666839 (Clockwise)

Preceding gene: 119945850

Following gene: 119945852

Centisome position: 58.46

GC content: 37.7

Gene sequence:

>1329_bases
ATGCAACAAGCAAAATTTCTGCAAGGATCTATTTTAAAACATGTTATAACCATGTCTGCGACTAATGCTATCGGCATTAG
TGCGTTGTTTATGGTCGATTTAGTGGATATCTATTTTATCAGTTTATTAGATAATCCAGCCCTCGTTGCTGCAATAGGCT
ATGCGGCTGCAATATTGTTTTTTACCACTTCAATCAGTATTGGTTTAGTAACGGCAAACAGTGCCAAAGTGGCCAAAGCC
ATTGGCCAGAAAAACCGCCAGAAAGCTTGCCGGTATATTTCCCACATCACTTTGTATGCTTTTTGCCTAACCACTTTATT
AACCTTAATTCTATGCTGGTTTACACCACAATTATTAGCGCTTATTGGTGCGCAGGGGCTAGAATTAACCGAGGCTGGTA
TCTATTTGCGGATTATTTTACCCACCTTTCCCATTTTGGCTATTGCGATGCAGATGGGCGCGACATTACGTGCAATGGGT
AATGCTAAAGCCGCCATGTTTGCTACATTAGGCGGCGGACTGGTCAATGCGGTACTCGATCCTGTCTTTATCTTTTTACT
GAACATGGATTTGCAGGGTGCCGCAGTGGCTTCCGTCATTTCACGTTTTTTTATCTTGGCTATTGGCTTATATTTTGTTT
TTTTTAAATACAAAATGCTTACTTTCCCTGACTTTACTCTTTTCCGCGCAGATATAAAAAAAATATCTCATGTTGCATTA
CCGGCAATATTTACCCAAATTGCAACCCCTATCGGTAATTTATACGTGACCTATGAAGTCGCTAAGTTTGGCACTGAATA
TATTGCTGGATGGGCAATTATTGGTCGCTTGATACCTGTATCTTTTGGTATGATGTTTGCCTTGTCCGGTGCCGTTGGAC
CTATTATTGGACAAAATTATGGCGCACAACAATTTGGTCGCGTCCGAAAAGTGTTAAATGAATCATTAAAATTTATGACC
AGCTATACGATCGTTATCGCATTATTATTATCAATGGCACAAGAGATGATAGTTAATTTATTTCATGCACAAAACCAAAC
CGCTGAGATTATAAGAATATTTTGTCAGTATATCGCAGCCAGCTTTTTATTTAGCGGCATTACCTTAATTGCAATGACTT
ACCTTAATAATTTAGGCTACGCAAAATATGCAACTTTTTTAAATGTCGCTAAAATGACACTGGGAACTATCCCTTTTGTC
ACTATTGGTGCTTTCTATTTTCAAGCACCAGGTATATTGTATGGTCAAGCTGTAGGGAATATTATATTTGGTATTTTATC
TTTGTTATTAACTTATAAGATAATGAGTAATATAGAAAAAACGAAATAA

Upstream 100 bases:

>100_bases
TCCTGAAAATATTGAATCTGAGCAGCAATTGATAGATAAATTTGCAGAATTATATAGTTAGTCGCTATAGTAGCTAGTTT
TGTCTCTCTTCAGGTAGCGC

Downstream 100 bases:

>100_bases
AATAACCTAAGTACTCACTCAAAGTTTTTTGATGTTAAAGAGTGTTTTTATTAAATAAACTGCTTAAAAATGTCAAGAAA
TTGTTGTAAGAGTACTTAGT

Product: MATE efflux family protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MQQAKFLQGSILKHVITMSATNAIGISALFMVDLVDIYFISLLDNPALVAAIGYAAAILFFTTSISIGLVTANSAKVAKA
IGQKNRQKACRYISHITLYAFCLTTLLTLILCWFTPQLLALIGAQGLELTEAGIYLRIILPTFPILAIAMQMGATLRAMG
NAKAAMFATLGGGLVNAVLDPVFIFLLNMDLQGAAVASVISRFFILAIGLYFVFFKYKMLTFPDFTLFRADIKKISHVAL
PAIFTQIATPIGNLYVTYEVAKFGTEYIAGWAIIGRLIPVSFGMMFALSGAVGPIIGQNYGAQQFGRVRKVLNESLKFMT
SYTIVIALLLSMAQEMIVNLFHAQNQTAEIIRIFCQYIAASFLFSGITLIAMTYLNNLGYAKYATFLNVAKMTLGTIPFV
TIGAFYFQAPGILYGQAVGNIIFGILSLLLTYKIMSNIEKTK

Sequences:

>Translated_442_residues
MQQAKFLQGSILKHVITMSATNAIGISALFMVDLVDIYFISLLDNPALVAAIGYAAAILFFTTSISIGLVTANSAKVAKA
IGQKNRQKACRYISHITLYAFCLTTLLTLILCWFTPQLLALIGAQGLELTEAGIYLRIILPTFPILAIAMQMGATLRAMG
NAKAAMFATLGGGLVNAVLDPVFIFLLNMDLQGAAVASVISRFFILAIGLYFVFFKYKMLTFPDFTLFRADIKKISHVAL
PAIFTQIATPIGNLYVTYEVAKFGTEYIAGWAIIGRLIPVSFGMMFALSGAVGPIIGQNYGAQQFGRVRKVLNESLKFMT
SYTIVIALLLSMAQEMIVNLFHAQNQTAEIIRIFCQYIAASFLFSGITLIAMTYLNNLGYAKYATFLNVAKMTLGTIPFV
TIGAFYFQAPGILYGQAVGNIIFGILSLLLTYKIMSNIEKTK
>Mature_442_residues
MQQAKFLQGSILKHVITMSATNAIGISALFMVDLVDIYFISLLDNPALVAAIGYAAAILFFTTSISIGLVTANSAKVAKA
IGQKNRQKACRYISHITLYAFCLTTLLTLILCWFTPQLLALIGAQGLELTEAGIYLRIILPTFPILAIAMQMGATLRAMG
NAKAAMFATLGGGLVNAVLDPVFIFLLNMDLQGAAVASVISRFFILAIGLYFVFFKYKMLTFPDFTLFRADIKKISHVAL
PAIFTQIATPIGNLYVTYEVAKFGTEYIAGWAIIGRLIPVSFGMMFALSGAVGPIIGQNYGAQQFGRVRKVLNESLKFMT
SYTIVIALLLSMAQEMIVNLFHAQNQTAEIIRIFCQYIAASFLFSGITLIAMTYLNNLGYAKYATFLNVAKMTLGTIPFV
TIGAFYFQAPGILYGQAVGNIIFGILSLLLTYKIMSNIEKTK

Specific function: May be a membrane-bound protein, possibly involved in IAA or IAA-Lysine transport [H]

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48217; Mature: 48217

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQAKFLQGSILKHVITMSATNAIGISALFMVDLVDIYFISLLDNPALVAAIGYAAAILF
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FTTSISIGLVTANSAKVAKAIGQKNRQKACRYISHITLYAFCLTTLLTLILCWFTPQLLA
HHHHHEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGAQGLELTEAGIYLRIILPTFPILAIAMQMGATLRAMGNAKAAMFATLGGGLVNAVLD
HHCCCCCCEECCCEEEEEHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHH
PVFIFLLNMDLQGAAVASVISRFFILAIGLYFVFFKYKMLTFPDFTLFRADIKKISHVAL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
PAIFTQIATPIGNLYVTYEVAKFGTEYIAGWAIIGRLIPVSFGMMFALSGAVGPIIGQNY
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
GAQQFGRVRKVLNESLKFMTSYTIVIALLLSMAQEMIVNLFHAQNQTAEIIRIFCQYIAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SFLFSGITLIAMTYLNNLGYAKYATFLNVAKMTLGTIPFVTIGAFYFQAPGILYGQAVGN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
IIFGILSLLLTYKIMSNIEKTK
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQAKFLQGSILKHVITMSATNAIGISALFMVDLVDIYFISLLDNPALVAAIGYAAAILF
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FTTSISIGLVTANSAKVAKAIGQKNRQKACRYISHITLYAFCLTTLLTLILCWFTPQLLA
HHHHHEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGAQGLELTEAGIYLRIILPTFPILAIAMQMGATLRAMGNAKAAMFATLGGGLVNAVLD
HHCCCCCCEECCCEEEEEHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHH
PVFIFLLNMDLQGAAVASVISRFFILAIGLYFVFFKYKMLTFPDFTLFRADIKKISHVAL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
PAIFTQIATPIGNLYVTYEVAKFGTEYIAGWAIIGRLIPVSFGMMFALSGAVGPIIGQNY
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
GAQQFGRVRKVLNESLKFMTSYTIVIALLLSMAQEMIVNLFHAQNQTAEIIRIFCQYIAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SFLFSGITLIAMTYLNNLGYAKYATFLNVAKMTLGTIPFVTIGAFYFQAPGILYGQAVGN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
IIFGILSLLLTYKIMSNIEKTK
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2377619 [H]