Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is yfhL [H]

Identifier: 119945850

GI number: 119945850

Start: 2665226

End: 2665471

Strand: Direct

Name: yfhL [H]

Synonym: Ping_2190

Alternate gene names: 119945850

Gene position: 2665226-2665471 (Clockwise)

Preceding gene: 119945849

Following gene: 119945851

Centisome position: 58.45

GC content: 36.18

Gene sequence:

>246_bases
ATGGCACTCTTAATTAAAGATAACTGTATCAATTGTGATATGTGCGATCCGGAATGCCCAAATGAAGCGATCCATTTTGA
TGCGGAGATCTACAAAATCACCCCGGATCTTTGCACTGAATGCATTGGTTTTTATGAAAAGCCAACCTGTATGGCGGTTT
GTCCGATTAACTGTATTATTATTGATCCTGAAAATATTGAATCTGAGCAGCAATTGATAGATAAATTTGCAGAATTATAT
AGTTAG

Upstream 100 bases:

>100_bases
TCTATATGCCAATACCCAAAGAAATCGACCTTAGTCATGCTTTGTTAATGCGTAATCTTAATAACGACCAAAACACGCGC
AACCCGCACAGTAAATAACC

Downstream 100 bases:

>100_bases
TCGCTATAGTAGCTAGTTTTGTCTCTCTTCAGGTAGCGCATGCAACAAGCAAAATTTCTGCAAGGATCTATTTTAAAACA
TGTTATAACCATGTCTGCGA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCIIIDPENIESEQQLIDKFAELY
S

Sequences:

>Translated_81_residues
MALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCIIIDPENIESEQQLIDKFAELY
S
>Mature_80_residues
ALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCIIIDPENIESEQQLIDKFAELYS

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=81, Percent_Identity=60.4938271604938, Blast_Score=101, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9211; Mature: 9079

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
14.8 %Cys+Met (Translated Protein)
11.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
13.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCII
CEEEECCCCCCCCCCCCCCCCCEEEECCEEEEECHHHHHHHHCCCCCCCEEEECCCEEEE
IDPENIESEQQLIDKFAELYS
ECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCII
EEEECCCCCCCCCCCCCCCCCEEEECCEEEEECHHHHHHHHCCCCCCCEEEECCCEEEE
IDPENIESEQQLIDKFAELYS
ECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]