| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yfhL [H]
Identifier: 119945850
GI number: 119945850
Start: 2665226
End: 2665471
Strand: Direct
Name: yfhL [H]
Synonym: Ping_2190
Alternate gene names: 119945850
Gene position: 2665226-2665471 (Clockwise)
Preceding gene: 119945849
Following gene: 119945851
Centisome position: 58.45
GC content: 36.18
Gene sequence:
>246_bases ATGGCACTCTTAATTAAAGATAACTGTATCAATTGTGATATGTGCGATCCGGAATGCCCAAATGAAGCGATCCATTTTGA TGCGGAGATCTACAAAATCACCCCGGATCTTTGCACTGAATGCATTGGTTTTTATGAAAAGCCAACCTGTATGGCGGTTT GTCCGATTAACTGTATTATTATTGATCCTGAAAATATTGAATCTGAGCAGCAATTGATAGATAAATTTGCAGAATTATAT AGTTAG
Upstream 100 bases:
>100_bases TCTATATGCCAATACCCAAAGAAATCGACCTTAGTCATGCTTTGTTAATGCGTAATCTTAATAACGACCAAAACACGCGC AACCCGCACAGTAAATAACC
Downstream 100 bases:
>100_bases TCGCTATAGTAGCTAGTTTTGTCTCTCTTCAGGTAGCGCATGCAACAAGCAAAATTTCTGCAAGGATCTATTTTAAAACA TGTTATAACCATGTCTGCGA
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCIIIDPENIESEQQLIDKFAELY S
Sequences:
>Translated_81_residues MALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCIIIDPENIESEQQLIDKFAELY S >Mature_80_residues ALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCIIIDPENIESEQQLIDKFAELYS
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788914, Length=81, Percent_Identity=60.4938271604938, Blast_Score=101, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9211; Mature: 9079
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 14.8 %Cys+Met (Translated Protein) 11.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 13.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCII CEEEECCCCCCCCCCCCCCCCCEEEECCEEEEECHHHHHHHHCCCCCCCEEEECCCEEEE IDPENIESEQQLIDKFAELYS ECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure ALLIKDNCINCDMCDPECPNEAIHFDAEIYKITPDLCTECIGFYEKPTCMAVCPINCII EEEECCCCCCCCCCCCCCCCCEEEECCEEEEECHHHHHHHHCCCCCCCEEEECCCEEEE IDPENIESEQQLIDKFAELYS ECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]