| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yegQ [C]
Identifier: 119945849
GI number: 119945849
Start: 2663880
End: 2665223
Strand: Direct
Name: yegQ [C]
Synonym: Ping_2189
Alternate gene names: 119945849
Gene position: 2663880-2665223 (Clockwise)
Preceding gene: 119945846
Following gene: 119945850
Centisome position: 58.42
GC content: 41.22
Gene sequence:
>1344_bases ATGACTCCAGAATTACTTTCCCCTGCCGGGACGTTAAAAAATATGCGTTATGCTTTTGCTTATGGAGCAGACGCTGTTTA TGCAGGTCAACCCCGTTATTCTCTGCGTGTAAGAAATAATGAATTTAATGTTGAAAAATTAGAAATTGGCATAAATGAAG CACACGCACAGGGCAAAAAACTTTACGTTGTCTGTAACATTCAACCCCATAATTCAAAATTGAAAACATTTATACATGAT ATGCAGCCAGTGGTGAATTTAAAACCAGATGCTTTAATCATGTCTGATCCCGGTTTAATCATGATGGTACGGGAAGCATT TCCACAGATGCCCGTACATTTAAGTGTGCAGGCGAACGCAGTGAACTGGGCAAGCGTTAAATTTTGGGAAAAACAAGGCA TTGAACGGGTTATTTTATCACGGGAATTATCATTAGATGAAATCGAAGATATTAGACAACATTGTCCTGATATTGAGATT GAAGTCTTTGTGCATGGTGCACTCTGTATGGCATATTCAGGCCGTTGTTTGTTGTCCGGTTACATCAATAAACGCGATCC TAATCAGGGAACATGCACCAACTCCTGCCGCTGGAAATATGATGCACATCCAGCAGAAGAAAATGAAACGGGTGATATTG TGGCGATCCAACGCCCGAATCCAACCTTAGGAGAAGGAAAACCGACTGACCAAATGTTCCTATTACAAGAGCAAGGTCGT CCCAATGAATACATGCCGGCATTTGAAGATGAGCATGGCACTTATATCATGAACTCCAAAGACTTACGCGCGATTCAACA TATTGAGCGCCTTTTAAGTATTGGCGTGCAATCTCTAAAAATTGAAGGCAGAACCAAGAGTTATTATTACTGCGCGCGCA CTGCGCAGGTTTATAGAAAAGCGATGGATGATGCCATCAATGGTCGCCCCTTTGATCCAAAATTGATGGGAACATTAGAA AATCTTGCGCACCGGGGGTATACGGAAGGTTTTTTAAGTCGCCACACCCATGATCAATATCAAAACTATGATTATGGTTA CTCTATCAGTGATACTCAACAATTTGTAGGGGAAATGACTGGTCGTGACGCCCAGGGTTTCGCTGAGGTGTTAGTTAAAA ATAAATTTTTAGTTGGTGACCAACTTGAATTGATGACACCGCAGGGAAATATTAATTTCGCCTTAGAACAACTGCAAACC AAAAAAGGAGAGCTTGTTGATGTGGCTCCTGGTTCAGGACATATTCTCTATATGCCAATACCCAAAGAAATCGACCTTAG TCATGCTTTGTTAATGCGTAATCTTAATAACGACCAAAACACGCGCAACCCGCACAGTAAATAA
Upstream 100 bases:
>100_bases AATTGATCTAACCCCATAACTTTATAACAAAAAAAAGTAGAATGTGTCGCCCATAAACCCCTTGGTTTATACTGACTTGA TATCAGAATAGAGATTATTT
Downstream 100 bases:
>100_bases CCATGGCACTCTTAATTAAAGATAACTGTATCAATTGTGATATGTGCGATCCGGAATGCCCAAATGAAGCGATCCATTTT GATGCGGAGATCTACAAAAT
Product: peptidase U32
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNVEKLEIGINEAHAQGKKLYVVCNIQPHNSKLKTFIHD MQPVVNLKPDALIMSDPGLIMMVREAFPQMPVHLSVQANAVNWASVKFWEKQGIERVILSRELSLDEIEDIRQHCPDIEI EVFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNSCRWKYDAHPAEENETGDIVAIQRPNPTLGEGKPTDQMFLLQEQGR PNEYMPAFEDEHGTYIMNSKDLRAIQHIERLLSIGVQSLKIEGRTKSYYYCARTAQVYRKAMDDAINGRPFDPKLMGTLE NLAHRGYTEGFLSRHTHDQYQNYDYGYSISDTQQFVGEMTGRDAQGFAEVLVKNKFLVGDQLELMTPQGNINFALEQLQT KKGELVDVAPGSGHILYMPIPKEIDLSHALLMRNLNNDQNTRNPHSK
Sequences:
>Translated_447_residues MTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNVEKLEIGINEAHAQGKKLYVVCNIQPHNSKLKTFIHD MQPVVNLKPDALIMSDPGLIMMVREAFPQMPVHLSVQANAVNWASVKFWEKQGIERVILSRELSLDEIEDIRQHCPDIEI EVFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNSCRWKYDAHPAEENETGDIVAIQRPNPTLGEGKPTDQMFLLQEQGR PNEYMPAFEDEHGTYIMNSKDLRAIQHIERLLSIGVQSLKIEGRTKSYYYCARTAQVYRKAMDDAINGRPFDPKLMGTLE NLAHRGYTEGFLSRHTHDQYQNYDYGYSISDTQQFVGEMTGRDAQGFAEVLVKNKFLVGDQLELMTPQGNINFALEQLQT KKGELVDVAPGSGHILYMPIPKEIDLSHALLMRNLNNDQNTRNPHSK >Mature_446_residues TPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNVEKLEIGINEAHAQGKKLYVVCNIQPHNSKLKTFIHDM QPVVNLKPDALIMSDPGLIMMVREAFPQMPVHLSVQANAVNWASVKFWEKQGIERVILSRELSLDEIEDIRQHCPDIEIE VFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNSCRWKYDAHPAEENETGDIVAIQRPNPTLGEGKPTDQMFLLQEQGRP NEYMPAFEDEHGTYIMNSKDLRAIQHIERLLSIGVQSLKIEGRTKSYYYCARTAQVYRKAMDDAINGRPFDPKLMGTLEN LAHRGYTEGFLSRHTHDQYQNYDYGYSISDTQQFVGEMTGRDAQGFAEVLVKNKFLVGDQLELMTPQGNINFALEQLQTK KGELVDVAPGSGHILYMPIPKEIDLSHALLMRNLNNDQNTRNPHSK
Specific function: Unknown
COG id: COG0826
COG function: function code O; Collagenase and related proteases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U32 family [H]
Homologues:
Organism=Escherichia coli, GI1788397, Length=451, Percent_Identity=71.6186252771619, Blast_Score=677, Evalue=0.0, Organism=Escherichia coli, GI87081910, Length=413, Percent_Identity=28.0871670702179, Blast_Score=138, Evalue=6e-34, Organism=Escherichia coli, GI1789548, Length=304, Percent_Identity=29.2763157894737, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001539 [H]
Pfam domain/function: PF01136 Peptidase_U32 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 50727; Mature: 50596
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS01276 PEPTIDASE_U32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNVEKLEIGINEAHAQGKK CCCCCCCCCHHHHCCEEEEEECCCEEEECCCCEEEEEECCCCCEEEEEECCCHHCCCCCE LYVVCNIQPHNSKLKTFIHDMQPVVNLKPDALIMSDPGLIMMVREAFPQMPVHLSVQANA EEEEEEECCCCHHHHHHHHHCCHHCCCCCCEEEEECCCEEEEEHHHCCCCCEEEEEEECC VNWASVKFWEKQGIERVILSRELSLDEIEDIRQHCPDIEIEVFVHGALCMAYSGRCLLSG CCEEEEEEHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEHCCCCEEEEE YINKRDPNQGTCTNSCRWKYDAHPAEENETGDIVAIQRPNPTLGEGKPTDQMFLLQEQGR CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCC PNEYMPAFEDEHGTYIMNSKDLRAIQHIERLLSIGVQSLKIEGRTKSYYYCARTAQVYRK CCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHH AMDDAINGRPFDPKLMGTLENLAHRGYTEGFLSRHTHDQYQNYDYGYSISDTQQFVGEMT HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHC GRDAQGFAEVLVKNKFLVGDQLELMTPQGNINFALEQLQTKKGELVDVAPGSGHILYMPI CCCHHHHHHHHHHCCEEECCCEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEC PKEIDLSHALLMRNLNNDQNTRNPHSK CCCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNVEKLEIGINEAHAQGKK CCCCCCCCHHHHCCEEEEEECCCEEEECCCCEEEEEECCCCCEEEEEECCCHHCCCCCE LYVVCNIQPHNSKLKTFIHDMQPVVNLKPDALIMSDPGLIMMVREAFPQMPVHLSVQANA EEEEEEECCCCHHHHHHHHHCCHHCCCCCCEEEEECCCEEEEEHHHCCCCCEEEEEEECC VNWASVKFWEKQGIERVILSRELSLDEIEDIRQHCPDIEIEVFVHGALCMAYSGRCLLSG CCEEEEEEHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEHCCCCEEEEE YINKRDPNQGTCTNSCRWKYDAHPAEENETGDIVAIQRPNPTLGEGKPTDQMFLLQEQGR CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCC PNEYMPAFEDEHGTYIMNSKDLRAIQHIERLLSIGVQSLKIEGRTKSYYYCARTAQVYRK CCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHH AMDDAINGRPFDPKLMGTLENLAHRGYTEGFLSRHTHDQYQNYDYGYSISDTQQFVGEMT HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHC GRDAQGFAEVLVKNKFLVGDQLELMTPQGNINFALEQLQTKKGELVDVAPGSGHILYMPI CCCHHHHHHHHHHCCEEECCCEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEC PKEIDLSHALLMRNLNNDQNTRNPHSK CCCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]