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The map label for this gene is cysS [H]

Identifier: 119945844

GI number: 119945844

Start: 2658038

End: 2659423

Strand: Reverse

Name: cysS [H]

Synonym: Ping_2184

Alternate gene names: 119945844

Gene position: 2659423-2658038 (Counterclockwise)

Preceding gene: 119945847

Following gene: 119945843

Centisome position: 58.33

GC content: 40.26

Gene sequence:

>1386_bases
ATGTTAAAAATATACAACAGCTTAACGCGACAAAAAGAACCGTTTAAACCGCTCATTCCCGGTAAAGTTGGTATGTATGT
GTGTGGTATCACTATTTACGATTATTGCCATATAGGCCATGGTCGCACATTTGTGGCTTTTGATACTGTGGCGCGTTATT
TACGTTTTAGTGGATACTCACTTAATTATATTCGTAATATCACCGACGTAGATGACAAAATAATTAAACGAGCAGCTGAA
AATAATGAAAGCTGTGATCAATTAACATCACGTTTTACCGAGGCTATGCATCAGGATTTTGATGCGTTGTTTATGTTACG
TCCGGATCTTGAACCTCGGGTGACGGATCATATGCCAGAAGTTATCGAGATGATCAAAAAATTGATCGCAAAAGGGCACG
CCTATGTTGCCGAAAACAATGATGTTTTATTTGCAGTTGACAGCTTTAAAGAATATGGTCAATTAAGCGGCCAAAATTTG
GAAATGTTACGGGCAGGCTCGCGCGTTGAAGTTGAAGAGAGTAAACGTAATCCATTGGATTTTGTTCTTTGGAAAATGGC
AAAACCCGCTGAGCCTTTTTGGACTTCGCCTTGGGGGAACGGTCGTCCCGGTTGGCATATTGAATGTTCAGCTATGAACC
ATAAACATCTTGGTGAAGTATTTGATATCCATGGTGGTGGATCCGATCTTGCTTTTCCGCACCATGAAAATGAAATTGCG
CAATCCTGTTGCGCCCATCATGGTCAGTATGTGAATACCTGGATGCATTCGGGAATGGTGCAAGTAGACAAAGTTAAAAT
GTCGAAATCACTTAAGAATTTTTTTACCATTAAAGAGGTGTTAAAATTTTTTGATAGTGAGTCCGTCCGATATTTTTTGA
TTTCGGGACATTACCGCAGCCAACTTAACTATTCTGAAGATAATTTAAAACAGGCCCGTGCGAGCCTGGAGCGTTTATAC
AACTCAGTTCGTGATTTAACCTTCAGTAAAGACACTCCGCTTGATAAAACGAATCTGCATTATCAGCAATTTATTAAAGC
AATGGATGATGATTTTAATACGCCGGGGGCTTTAGCTGTATTGTTCGATCTTGCTAAAGAGATAAACCGTCTTAAACAGT
CGAATATTAAGCAAGCATCTTTATCTGCGGGACTATTAGTGACACTTGCTAATGTGCTTGGTTTATTAAACCAGTCAGCC
GAGCAGTTTTTGCAGGGTGATGAAAAAAACGAAGAAGTTGCCATGATTGAAGCGCTTATCAAACAACGTAATGATGCTAG
ACAAAATAAAGATTGGGCTTCAGCGGATTCAGCGCGTGATAAACTGGCGGCATTAAAAATTGTTTTAGAGGATGGCCCTG
GCGGCACAACTTGGCGGAAACAGTAA

Upstream 100 bases:

>100_bases
TATCATACCCTAAAGCATGATATTCATTAAATACAAAGGGTGAATTTCTATTAATTGCAGGTTAGAATGCCCATTCTATA
GTGATCTGATTGGAAGCTTC

Downstream 100 bases:

>100_bases
GCGTTATTTAATAATACTAAAATAACTCAAAAGGTAACCAACCCGGCTTGTCAATATCAATGCTAACTGGGTTGATATTT
ATTCAGAGCGTCTTGTTCTT

Product: cysteinyl-tRNA synthetase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MLKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYSLNYIRNITDVDDKIIKRAAE
NNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPEVIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNL
EMLRAGSRVEVEESKRNPLDFVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFPHHENEIA
QSCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRYFLISGHYRSQLNYSEDNLKQARASLERLY
NSVRDLTFSKDTPLDKTNLHYQQFIKAMDDDFNTPGALAVLFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSA
EQFLQGDEKNEEVAMIEALIKQRNDARQNKDWASADSARDKLAALKIVLEDGPGGTTWRKQ

Sequences:

>Translated_461_residues
MLKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYSLNYIRNITDVDDKIIKRAAE
NNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPEVIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNL
EMLRAGSRVEVEESKRNPLDFVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFPHHENEIA
QSCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRYFLISGHYRSQLNYSEDNLKQARASLERLY
NSVRDLTFSKDTPLDKTNLHYQQFIKAMDDDFNTPGALAVLFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSA
EQFLQGDEKNEEVAMIEALIKQRNDARQNKDWASADSARDKLAALKIVLEDGPGGTTWRKQ
>Mature_461_residues
MLKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYSLNYIRNITDVDDKIIKRAAE
NNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPEVIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNL
EMLRAGSRVEVEESKRNPLDFVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFPHHENEIA
QSCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRYFLISGHYRSQLNYSEDNLKQARASLERLY
NSVRDLTFSKDTPLDKTNLHYQQFIKAMDDDFNTPGALAVLFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSA
EQFLQGDEKNEEVAMIEALIKQRNDARQNKDWASADSARDKLAALKIVLEDGPGGTTWRKQ

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=486, Percent_Identity=36.6255144032922, Blast_Score=269, Evalue=3e-72,
Organism=Homo sapiens, GI62240992, Length=231, Percent_Identity=40.6926406926407, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI303304987, Length=231, Percent_Identity=40.6926406926407, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI10835051, Length=258, Percent_Identity=38.7596899224806, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI21269877, Length=230, Percent_Identity=40.8695652173913, Blast_Score=180, Evalue=2e-45,
Organism=Escherichia coli, GI1786737, Length=463, Percent_Identity=65.658747300216, Blast_Score=611, Evalue=1e-176,
Organism=Caenorhabditis elegans, GI17509795, Length=445, Percent_Identity=32.3595505617978, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17509797, Length=445, Percent_Identity=32.3595505617978, Blast_Score=184, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6324082, Length=329, Percent_Identity=34.3465045592705, Blast_Score=185, Evalue=1e-47,
Organism=Drosophila melanogaster, GI19922218, Length=387, Percent_Identity=40.8268733850129, Blast_Score=258, Evalue=6e-69,
Organism=Drosophila melanogaster, GI19922364, Length=278, Percent_Identity=37.7697841726619, Blast_Score=187, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 52544; Mature: 52544

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYS
CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHCCCC
LNYIRNITDVDDKIIKRAAENNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPE
HHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
VIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVEESKRNPLD
HHHHHHHHHHCCCEEEECCCCEEEEECCHHHHHCCCCCCHHHHHCCCCEEEHHCCCCCHH
FVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFPHHENEIA
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHCCCEEEECCCCCCCCCCCCHHHHH
QSCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRYFLISGHYRS
HHHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHC
QLNYSEDNLKQARASLERLYNSVRDLTFSKDTPLDKTNLHYQQFIKAMDDDFNTPGALAV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHH
LFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSAEQFLQGDEKNEEVAMIEALI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KQRNDARQNKDWASADSARDKLAALKIVLEDGPGGTTWRKQ
HHHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYS
CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHCCCC
LNYIRNITDVDDKIIKRAAENNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPE
HHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
VIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVEESKRNPLD
HHHHHHHHHHCCCEEEECCCCEEEEECCHHHHHCCCCCCHHHHHCCCCEEEHHCCCCCHH
FVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFPHHENEIA
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHCCCEEEECCCCCCCCCCCCHHHHH
QSCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRYFLISGHYRS
HHHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHC
QLNYSEDNLKQARASLERLYNSVRDLTFSKDTPLDKTNLHYQQFIKAMDDDFNTPGALAV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHH
LFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSAEQFLQGDEKNEEVAMIEALI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KQRNDARQNKDWASADSARDKLAALKIVLEDGPGGTTWRKQ
HHHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA