| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ina [H]
Identifier: 119945807
GI number: 119945807
Start: 2616617
End: 2618158
Strand: Direct
Name: ina [H]
Synonym: Ping_2144
Alternate gene names: 119945807
Gene position: 2616617-2618158 (Clockwise)
Preceding gene: 119945805
Following gene: 119945808
Centisome position: 57.39
GC content: 44.55
Gene sequence:
>1542_bases ATGTGTAATGACTTATGCATAATGCCCCCCTCTCCAGATCTGCACAACAAAATAGACGAGTCTAAACGTGCATTCCTAAA GGGAAGTCTTCTTGGTATAGATCAGGTAGATTTACTCGACATGCGAACATTTACCTTGATCACCGGGCGTCCGGCAAAAA CCCGTTCACACAACAATTCGCTAGAGTCTGCTTCTGTAAAAGGAGTACGTAAAGCACTGGTTTTATTAGTGGACTTCTCT GACAAAAAAGCCACTGAACCCAAAAGTCACTTCAATGATCTCATGTTTTCATTAAGTAAAAACAGCATGCGGGATTACTA CCGCGAAGTTTCCTATAATAATCTGGATGTACAAGGTGAAGTAGCAGGCAGTGGCCCAACTAAAGATTGGTTTCGTGCGC CCAAGCCAAAAAGTTATTATACCAATAATGACTTTGGCTTCGGCAGCTACCCGCAAAACGCACAAAAACTGGTCGAGGAC GTCATTGATTTAGCGGCATCGCACGTCAACTTTGCCGATTATGATAATTCCGGCGATGGAAAAGTTGAATCCTTAGTGAT CATCTGCGCTGGCATCGGTGGCGAGCAATCTGGTAACAAGACTGACTTATGGTCACATAAATGGAGCATAGTACCAAAGT CGGTCGATGGGGTGATCGTTGATCGTTATTTCATGGCACCAGAAAATGGAAAAGTAGGAGTAATGGCACACGAACTTGGG CATCTGCTAATGGGGTGGCCTGACTTATATGATACCGACTACTCCAGTCGAGGTACCGGACGCTGGGATCTAATGGCCGG AGGTAGCTGGAATAATAATGGCGACACCCCGGCTCACCCTACTGCCTGGTGTAAAGAGAAAGCAGGCTGGATCACGCCAA CGGTTATTTTTTCTGCCGATCAGGCAATCAATCTGCAACCCTATGCAGATCATGCCCAAGCTTATAAATTGCCCATTGGC AGTGCAGGCAGTAAAGAGTACTTTTTGCTCAGTAACCGAAAAAAGCGCGGCTTTGATCTACATTTGCCCGGTGAAGGTAT GATTATTGAGCATATTGATGACAATAAAATCAATAACACCGACGAAAACCATTATCTGGTAGACATAAAGCAATGTGATG GACTGAGGGAGCTAAACTTAAACATTAATAGCGGAAACGCGGGTGATGCTTACCCTAGTACTGCTAACAATTCATTCACT AATAGCACTTCGCCAAGCAGCAAAAGTTACGCTGGCGCAGACTCCAAGATAGCGGTAACCAATATCACTCAGTCCGGTGA CAACGTGACAGCTAATGTCAATGTTGGTGGGGCTACAGCTAAGGTTTGGAAGAATAATGTGGCCATTAGCAAAACTTATG CGACTTACCACAGCAAAAATGCCTGGGCATACATTGCCGGTGCCGGCTGGCGCAAAATAGATGGTCTGTCAACCGATGGT GTTACCAATGTATTTATATTACTGGTCTATGCACAAGCGTTCAACAGAAATGTTTCAGTACAAATTGATGGCGATAAAAT CTATACCGCTTATATGAACTAG
Upstream 100 bases:
>100_bases AAAAGTGTATTACAAAAAGTTACTTGTAGGCTGTAACGATTTTAATGCCTGATTTAAATAAAAGTTATTGGTTGATTTTG ATTGATAAGGATATATCACT
Downstream 100 bases:
>100_bases GAGAGATAAAATGAATTTTTCAAACAAAGCTGTAACACGCACTTACGCAACGCCTCATTCTCAAAATTGCTGGGCTTATC TTGCCACTATTGGCTGGAGA
Product: peptidase M6, immune inhibitor A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MCNDLCIMPPSPDLHNKIDESKRAFLKGSLLGIDQVDLLDMRTFTLITGRPAKTRSHNNSLESASVKGVRKALVLLVDFS DKKATEPKSHFNDLMFSLSKNSMRDYYREVSYNNLDVQGEVAGSGPTKDWFRAPKPKSYYTNNDFGFGSYPQNAQKLVED VIDLAASHVNFADYDNSGDGKVESLVIICAGIGGEQSGNKTDLWSHKWSIVPKSVDGVIVDRYFMAPENGKVGVMAHELG HLLMGWPDLYDTDYSSRGTGRWDLMAGGSWNNNGDTPAHPTAWCKEKAGWITPTVIFSADQAINLQPYADHAQAYKLPIG SAGSKEYFLLSNRKKRGFDLHLPGEGMIIEHIDDNKINNTDENHYLVDIKQCDGLRELNLNINSGNAGDAYPSTANNSFT NSTSPSSKSYAGADSKIAVTNITQSGDNVTANVNVGGATAKVWKNNVAISKTYATYHSKNAWAYIAGAGWRKIDGLSTDG VTNVFILLVYAQAFNRNVSVQIDGDKIYTAYMN
Sequences:
>Translated_513_residues MCNDLCIMPPSPDLHNKIDESKRAFLKGSLLGIDQVDLLDMRTFTLITGRPAKTRSHNNSLESASVKGVRKALVLLVDFS DKKATEPKSHFNDLMFSLSKNSMRDYYREVSYNNLDVQGEVAGSGPTKDWFRAPKPKSYYTNNDFGFGSYPQNAQKLVED VIDLAASHVNFADYDNSGDGKVESLVIICAGIGGEQSGNKTDLWSHKWSIVPKSVDGVIVDRYFMAPENGKVGVMAHELG HLLMGWPDLYDTDYSSRGTGRWDLMAGGSWNNNGDTPAHPTAWCKEKAGWITPTVIFSADQAINLQPYADHAQAYKLPIG SAGSKEYFLLSNRKKRGFDLHLPGEGMIIEHIDDNKINNTDENHYLVDIKQCDGLRELNLNINSGNAGDAYPSTANNSFT NSTSPSSKSYAGADSKIAVTNITQSGDNVTANVNVGGATAKVWKNNVAISKTYATYHSKNAWAYIAGAGWRKIDGLSTDG VTNVFILLVYAQAFNRNVSVQIDGDKIYTAYMN >Mature_513_residues MCNDLCIMPPSPDLHNKIDESKRAFLKGSLLGIDQVDLLDMRTFTLITGRPAKTRSHNNSLESASVKGVRKALVLLVDFS DKKATEPKSHFNDLMFSLSKNSMRDYYREVSYNNLDVQGEVAGSGPTKDWFRAPKPKSYYTNNDFGFGSYPQNAQKLVED VIDLAASHVNFADYDNSGDGKVESLVIICAGIGGEQSGNKTDLWSHKWSIVPKSVDGVIVDRYFMAPENGKVGVMAHELG HLLMGWPDLYDTDYSSRGTGRWDLMAGGSWNNNGDTPAHPTAWCKEKAGWITPTVIFSADQAINLQPYADHAQAYKLPIG SAGSKEYFLLSNRKKRGFDLHLPGEGMIIEHIDDNKINNTDENHYLVDIKQCDGLRELNLNINSGNAGDAYPSTANNSFT NSTSPSSKSYAGADSKIAVTNITQSGDNVTANVNVGGATAKVWKNNVAISKTYATYHSKNAWAYIAGAGWRKIDGLSTDG VTNVFILLVYAQAFNRNVSVQIDGDKIYTAYMN
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 56322; Mature: 56322
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNDLCIMPPSPDLHNKIDESKRAFLKGSLLGIDQVDLLDMRTFTLITGRPAKTRSHNNS CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEEEECCCCCCCCCCCC LESASVKGVRKALVLLVDFSDKKATEPKSHFNDLMFSLSKNSMRDYYREVSYNNLDVQGE CCHHHHHHHEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VAGSGPTKDWFRAPKPKSYYTNNDFGFGSYPQNAQKLVEDVIDLAASHVNFADYDNSGDG ECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCC KVESLVIICAGIGGEQSGNKTDLWSHKWSIVPKSVDGVIVDRYFMAPENGKVGVMAHELG CEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEHHHHH HLLMGWPDLYDTDYSSRGTGRWDLMAGGSWNNNGDTPAHPTAWCKEKAGWITPTVIFSAD HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECC QAINLQPYADHAQAYKLPIGSAGSKEYFLLSNRKKRGFDLHLPGEGMIIEHIDDNKINNT CEEECCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCC DENHYLVDIKQCDGLRELNLNINSGNAGDAYPSTANNSFTNSTSPSSKSYAGADSKIAVT CCCEEEEEEHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE NITQSGDNVTANVNVGGATAKVWKNNVAISKTYATYHSKNAWAYIAGAGWRKIDGLSTDG EEECCCCCEEEEEECCCCEEEEECCCEEEEEEEEEEECCCCEEEEECCCCEEECCCCCCC VTNVFILLVYAQAFNRNVSVQIDGDKIYTAYMN HHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEC >Mature Secondary Structure MCNDLCIMPPSPDLHNKIDESKRAFLKGSLLGIDQVDLLDMRTFTLITGRPAKTRSHNNS CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEEEECCCCCCCCCCCC LESASVKGVRKALVLLVDFSDKKATEPKSHFNDLMFSLSKNSMRDYYREVSYNNLDVQGE CCHHHHHHHEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VAGSGPTKDWFRAPKPKSYYTNNDFGFGSYPQNAQKLVEDVIDLAASHVNFADYDNSGDG ECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCC KVESLVIICAGIGGEQSGNKTDLWSHKWSIVPKSVDGVIVDRYFMAPENGKVGVMAHELG CEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEHHHHH HLLMGWPDLYDTDYSSRGTGRWDLMAGGSWNNNGDTPAHPTAWCKEKAGWITPTVIFSAD HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECC QAINLQPYADHAQAYKLPIGSAGSKEYFLLSNRKKRGFDLHLPGEGMIIEHIDDNKINNT CEEECCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCC DENHYLVDIKQCDGLRELNLNINSGNAGDAYPSTANNSFTNSTSPSSKSYAGADSKIAVT CCCEEEEEEHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE NITQSGDNVTANVNVGGATAKVWKNNVAISKTYATYHSKNAWAYIAGAGWRKIDGLSTDG EEECCCCCEEEEEECCCCEEEEECCCEEEEEEEEEEECCCCEEEEECCCCEEECCCCCCC VTNVFILLVYAQAFNRNVSVQIDGDKIYTAYMN HHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]