| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is katG
Identifier: 119945805
GI number: 119945805
Start: 2611328
End: 2613502
Strand: Direct
Name: katG
Synonym: Ping_2142
Alternate gene names: 119945805
Gene position: 2611328-2613502 (Clockwise)
Preceding gene: 119945804
Following gene: 119945807
Centisome position: 57.27
GC content: 50.94
Gene sequence:
>2175_bases ATGAGCAAAAATGCGACAAATACTGGCGGTAAATGTCCAGTGATGCACGGCGGTGCAACAGAAGTTAGCATATCGAACAT GGAATGGTGGCCGAAGGCCCTGAACCTCGACATTCTTCATCAACACGATAGTAAGACTAATCCGATGGGGCCGGACTTTA ACTATCGGGAAATGGTCAAGAAGCTTGACGTAGCAGCGCTCAAGAAAGATATGCACGCACTGATGACCGAGAGTCAGGAC TGGTGGCTGGCGGACTGGGGGCACTACGGTGGTCTTATGATCCGCCTGTCCTGGCATGCCGCTGGGACTTATCGTATTGC CGATGGACGAGGAGGTGCCGGTACCGGCAACCAGCGTTTTGCACCGATCAACTCCTGGCCGGATAACGTAAACCTGGACA AGGCGCGTCGTCTGCTCTGGCCAATCAAGAAAAAATATGGCAACAAGCTCAGCTGGGCCGATTTAATTGCCTATGCGGGC ACTATAGCTTATGAATCTATGGGCTTAAAAACCTTTGGTTTTGCCTTTGGCCGTGAAGATATCTGGCATCCCGAAAAGGA CACCTACTGGGGCTCAGAAAAAGAGTGGCTTGCGCCTAGCGGCAGCGAAGGAAGCCGTTATTCCGGTGAGCGCGATCTGG AAAATCCGCTGGCCGCAGTAATGATGGGATTGATTTACGTTAACCCCGAAGGTGTGGACGGTAATCCCGATCCGCTTAAG ACAGCTCATGATATTCGAGTCACCTTTGAGCGAATGGCGATGAACGATGAGGAAACCGTCGCGCTCACCGCTGGGGGTCA CACGGTGGGTAAATGTCATGGTAATGGCGATGCCGATCAGCTCGGCGCAGAACCTGAAGGTGCTGAAATTGAAGATCAGG GCTTTGGCTGGTTAAATAAAACCAAGCGTGGTATTGGCCGCGATACTGTATCCAGTGGTATTGAAGGCGCATGGACGACA AACCCTACCCAATGGGATAACGGCTATTTTCAACTGTTGCTAAATTATGAGTGGGAACTGAAAAAAAGCCCGGCCGGTGC TTGGCAATGGGAACCTATTAATATTAAGGAAGAACACAGGCCGGTGGATGTTGAAGACGCCTCTATTCGCTTAACGCCTA TCATGACCGATGCCGACATGGCGATGAAGATGGATCCGGAGTATCGGAAGATATCAGATCGTTTCCACCAGGATCAGGAT TATTTCTCCGAGGTCTTCGCACGAGCATGGTTCAAGCTGACCCATCGTGATATGGGACCAAAGGTGCGTTATATCGGCCC TGATGTACCGCAAGAAGAGCAGATCTGGCAAGATCCGGTTCCTGCAGGAAGCACTGATTATGATATTCAGGCGGTGAAAG ACAAAATAGCTGCCAGTGATCTCAGCGTAAGCGAAATGGTATCGACCGCATGGGACAGTGCCAGAACCTTCCGTGGTTCG GACAAGCGCGGTGGTGCTAACGGAGCACGCATTCGTCTCGCCCCGCAAAAAGACTGGAAAGGTAATGAGCCAGCACGTCT AAGTAAAGTGCTGGCGGTGCTTGAAGGCATAGCGGCCGGAAGCAAAGCAAGTGTTGCTGATGTGATTGTGCTGGCAGGTA ACGTCGGTATTGAACAGGCCGCAAAAGCCGCTGGTTTTGATCTGACGGTGCCGTTCTCCTCCGGGCGCGGAGATGCAACA GATGAGATGACGGATCTGGATTCTTTTGACGTACTGGAACCTATTCATGATGGCTATCGCAACTGGCTTAAGCAGGACTA CGCCGTGAGCGCTGAAGAGCTGATGCTTGACCGTACGCAACTGATGGGACTAACCGCGCATGAAATGACCGTACTGATTG GGGGTATGCGGGTGATTGGTACTAACCAAGGTGGCACTAAGCACGGTGTGTTGACCGAGCATGAAGGCACACTCAGCAAC GACTTCTTTGTTAACCTCACGGACATGAATTACACCTGGAAGCCGACCGGTAATAATCTTTATGAAATCCGCGACCGTAA GACAGATAAGGTCAAATGGACAGCAACACGAGTTGATTTAGTCTTTGGTTCGAATTCGATCCTGCGCGCCTATGCCGAAG TTTATGCACAGGATGACAACAAGGAAAAATTTGTGCAGGACTTTGTATCTGCATGGACTAAGGTGATGAACGCTGATCGT TTCGATCTGATCTGA
Upstream 100 bases:
>100_bases TTTGACAAGACGAATTGTAATCCAAAGTGGTTACTTTAAGTAATCATGTTGTGCCATTAACTAAGATTCATGTATATCAC CCCACACAAGGAAAATGAAT
Downstream 100 bases:
>100_bases TTTTTGAGCATAGCTCCCTACGGCGCAGATCACTGCGCCGTGGGGATAATAAAAAGCACTTGAATATATTATCCTAAAGC CCATCTCTTAACTAAAAAAT
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MSKNATNTGGKCPVMHGGATEVSISNMEWWPKALNLDILHQHDSKTNPMGPDFNYREMVKKLDVAALKKDMHALMTESQD WWLADWGHYGGLMIRLSWHAAGTYRIADGRGGAGTGNQRFAPINSWPDNVNLDKARRLLWPIKKKYGNKLSWADLIAYAG TIAYESMGLKTFGFAFGREDIWHPEKDTYWGSEKEWLAPSGSEGSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLK TAHDIRVTFERMAMNDEETVALTAGGHTVGKCHGNGDADQLGAEPEGAEIEDQGFGWLNKTKRGIGRDTVSSGIEGAWTT NPTQWDNGYFQLLLNYEWELKKSPAGAWQWEPINIKEEHRPVDVEDASIRLTPIMTDADMAMKMDPEYRKISDRFHQDQD YFSEVFARAWFKLTHRDMGPKVRYIGPDVPQEEQIWQDPVPAGSTDYDIQAVKDKIAASDLSVSEMVSTAWDSARTFRGS DKRGGANGARIRLAPQKDWKGNEPARLSKVLAVLEGIAAGSKASVADVIVLAGNVGIEQAAKAAGFDLTVPFSSGRGDAT DEMTDLDSFDVLEPIHDGYRNWLKQDYAVSAEELMLDRTQLMGLTAHEMTVLIGGMRVIGTNQGGTKHGVLTEHEGTLSN DFFVNLTDMNYTWKPTGNNLYEIRDRKTDKVKWTATRVDLVFGSNSILRAYAEVYAQDDNKEKFVQDFVSAWTKVMNADR FDLI
Sequences:
>Translated_724_residues MSKNATNTGGKCPVMHGGATEVSISNMEWWPKALNLDILHQHDSKTNPMGPDFNYREMVKKLDVAALKKDMHALMTESQD WWLADWGHYGGLMIRLSWHAAGTYRIADGRGGAGTGNQRFAPINSWPDNVNLDKARRLLWPIKKKYGNKLSWADLIAYAG TIAYESMGLKTFGFAFGREDIWHPEKDTYWGSEKEWLAPSGSEGSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLK TAHDIRVTFERMAMNDEETVALTAGGHTVGKCHGNGDADQLGAEPEGAEIEDQGFGWLNKTKRGIGRDTVSSGIEGAWTT NPTQWDNGYFQLLLNYEWELKKSPAGAWQWEPINIKEEHRPVDVEDASIRLTPIMTDADMAMKMDPEYRKISDRFHQDQD YFSEVFARAWFKLTHRDMGPKVRYIGPDVPQEEQIWQDPVPAGSTDYDIQAVKDKIAASDLSVSEMVSTAWDSARTFRGS DKRGGANGARIRLAPQKDWKGNEPARLSKVLAVLEGIAAGSKASVADVIVLAGNVGIEQAAKAAGFDLTVPFSSGRGDAT DEMTDLDSFDVLEPIHDGYRNWLKQDYAVSAEELMLDRTQLMGLTAHEMTVLIGGMRVIGTNQGGTKHGVLTEHEGTLSN DFFVNLTDMNYTWKPTGNNLYEIRDRKTDKVKWTATRVDLVFGSNSILRAYAEVYAQDDNKEKFVQDFVSAWTKVMNADR FDLI >Mature_723_residues SKNATNTGGKCPVMHGGATEVSISNMEWWPKALNLDILHQHDSKTNPMGPDFNYREMVKKLDVAALKKDMHALMTESQDW WLADWGHYGGLMIRLSWHAAGTYRIADGRGGAGTGNQRFAPINSWPDNVNLDKARRLLWPIKKKYGNKLSWADLIAYAGT IAYESMGLKTFGFAFGREDIWHPEKDTYWGSEKEWLAPSGSEGSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLKT AHDIRVTFERMAMNDEETVALTAGGHTVGKCHGNGDADQLGAEPEGAEIEDQGFGWLNKTKRGIGRDTVSSGIEGAWTTN PTQWDNGYFQLLLNYEWELKKSPAGAWQWEPINIKEEHRPVDVEDASIRLTPIMTDADMAMKMDPEYRKISDRFHQDQDY FSEVFARAWFKLTHRDMGPKVRYIGPDVPQEEQIWQDPVPAGSTDYDIQAVKDKIAASDLSVSEMVSTAWDSARTFRGSD KRGGANGARIRLAPQKDWKGNEPARLSKVLAVLEGIAAGSKASVADVIVLAGNVGIEQAAKAAGFDLTVPFSSGRGDATD EMTDLDSFDVLEPIHDGYRNWLKQDYAVSAEELMLDRTQLMGLTAHEMTVLIGGMRVIGTNQGGTKHGVLTEHEGTLSND FFVNLTDMNYTWKPTGNNLYEIRDRKTDKVKWTATRVDLVFGSNSILRAYAEVYAQDDNKEKFVQDFVSAWTKVMNADRF DLI
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=728, Percent_Identity=55.9065934065934, Blast_Score=784, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_PSYIN (A1SWM1)
Other databases:
- EMBL: CP000510 - RefSeq: YP_943485.1 - ProteinModelPortal: A1SWM1 - SMR: A1SWM1 - STRING: A1SWM1 - GeneID: 4625928 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_2142 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: WPNALNL - PhylomeDB: A1SWM1 - ProtClustDB: PRK15061 - BioCyc: PING357804:PING_2142-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 80790; Mature: 80659
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 99-99
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNATNTGGKCPVMHGGATEVSISNMEWWPKALNLDILHQHDSKTNPMGPDFNYREMVK CCCCCCCCCCCCEEEECCCCEEEECCCCCCHHHCCEEEEECCCCCCCCCCCCCCHHHHHH KLDVAALKKDMHALMTESQDWWLADWGHYGGLMIRLSWHAAGTYRIADGRGGAGTGNQRF HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCEE APINSWPDNVNLDKARRLLWPIKKKYGNKLSWADLIAYAGTIAYESMGLKTFGFAFGRED CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCC IWHPEKDTYWGSEKEWLAPSGSEGSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCC TAHDIRVTFERMAMNDEETVALTAGGHTVGKCHGNGDADQLGAEPEGAEIEDQGFGWLNK CCHHHHEEEHHHHCCCCCEEEEEECCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCHHH TKRGIGRDTVSSGIEGAWTTNPTQWDNGYFQLLLNYEWELKKSPAGAWQWEPINIKEEHR HHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCEECCCCCCHHCCC PVDVEDASIRLTPIMTDADMAMKMDPEYRKISDRFHQDQDYFSEVFARAWFKLTHRDMGP CCCCCCCEEEEEEEEECCCHHEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC KVRYIGPDVPQEEQIWQDPVPAGSTDYDIQAVKDKIAASDLSVSEMVSTAWDSARTFRGS EEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC DKRGGANGARIRLAPQKDWKGNEPARLSKVLAVLEGIAAGSKASVADVIVLAGNVGIEQA CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHH AKAAGFDLTVPFSSGRGDATDEMTDLDSFDVLEPIHDGYRNWLKQDYAVSAEELMLDRTQ HHHCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LMGLTAHEMTVLIGGMRVIGTNQGGTKHGVLTEHEGTLSNDFFVNLTDMNYTWKPTGNNL HHCCCHHHHEEEECCEEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCCEEECCCCCCE YEIRDRKTDKVKWTATRVDLVFGSNSILRAYAEVYAQDDNKEKFVQDFVSAWTKVMNADR EEECCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH FDLI HCCC >Mature Secondary Structure SKNATNTGGKCPVMHGGATEVSISNMEWWPKALNLDILHQHDSKTNPMGPDFNYREMVK CCCCCCCCCCCEEEECCCCEEEECCCCCCHHHCCEEEEECCCCCCCCCCCCCCHHHHHH KLDVAALKKDMHALMTESQDWWLADWGHYGGLMIRLSWHAAGTYRIADGRGGAGTGNQRF HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCEE APINSWPDNVNLDKARRLLWPIKKKYGNKLSWADLIAYAGTIAYESMGLKTFGFAFGRED CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCC IWHPEKDTYWGSEKEWLAPSGSEGSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCC TAHDIRVTFERMAMNDEETVALTAGGHTVGKCHGNGDADQLGAEPEGAEIEDQGFGWLNK CCHHHHEEEHHHHCCCCCEEEEEECCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCHHH TKRGIGRDTVSSGIEGAWTTNPTQWDNGYFQLLLNYEWELKKSPAGAWQWEPINIKEEHR HHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCEECCCCCCHHCCC PVDVEDASIRLTPIMTDADMAMKMDPEYRKISDRFHQDQDYFSEVFARAWFKLTHRDMGP CCCCCCCEEEEEEEEECCCHHEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC KVRYIGPDVPQEEQIWQDPVPAGSTDYDIQAVKDKIAASDLSVSEMVSTAWDSARTFRGS EEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC DKRGGANGARIRLAPQKDWKGNEPARLSKVLAVLEGIAAGSKASVADVIVLAGNVGIEQA CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHH AKAAGFDLTVPFSSGRGDATDEMTDLDSFDVLEPIHDGYRNWLKQDYAVSAEELMLDRTQ HHHCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LMGLTAHEMTVLIGGMRVIGTNQGGTKHGVLTEHEGTLSNDFFVNLTDMNYTWKPTGNNL HHCCCHHHHEEEECCEEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCCEEECCCCCCE YEIRDRKTDKVKWTATRVDLVFGSNSILRAYAEVYAQDDNKEKFVQDFVSAWTKVMNADR EEECCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH FDLI HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA