| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945798
Identifier: 119945798
GI number: 119945798
Start: 2602673
End: 2603224
Strand: Reverse
Name: 119945798
Synonym: Ping_2135
Alternate gene names: NA
Gene position: 2603224-2602673 (Counterclockwise)
Preceding gene: 119945799
Following gene: 119945793
Centisome position: 57.09
GC content: 39.31
Gene sequence:
>552_bases ATGAAATACTCCTACATCGACGCGTATGAGGATTTGCTAAAGCAATGTTTATTTATCCCTGATCTGGTCACAAAATCAGC CAATAAAGAGTTGCGTTTTCTTGGCGATTTTAATCAATGGTTGCTTGATACTGAAGAGGTAATGAAAAAATATAATATTT CTAAGTGTGCAGAAATAGCGGGTTTACGTAGCAAAATTATTGCTGCCTCTTACGCCACTGATCCCAAAATATCTAAAAAG AAACGGCAACTGTCCGTTGCAACTTCTATTATTTATGAAGCTCAGAATACGGTATTAAGTGTTTTAGAACCGATGGAAGG GCGTATAGCAGAAGCAAGAAATGCTATACGGCAGTTGTTAGGCGTCGCCTACCAGTCAAATATGACAAATCGGCACATGA ATTTTAATCAGATGATCCGGAAACTGTGGGCTGATTTTTCAGCTCATGAGCAATTAAAAGGTGCGATTGCGAGCATCTTG GTTCTGGTAAACCAATCTGATGCTTTGAGAATGTTGGCGGAGGAGATAGATATGTCTATGCTTGGAAGGTAA
Upstream 100 bases:
>100_bases TGCTTTATATTAAGATGAAGATTACTGAAGAGAGTATGGAGTGGCAGGTGATGGAAGATGCTGATGGTAATATAGTCTCC AAATTGATGGTAGAGTAATT
Downstream 100 bases:
>100_bases AAAACCGGGTATTTAACTCTTTTATTACTTTAAAGCATTGGCTGATAAAATTTTTATTAGAGCATAAAAAGCAAAGGTTT CTGCTTCCAAGTGCCTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKYSYIDAYEDLLKQCLFIPDLVTKSANKELRFLGDFNQWLLDTEEVMKKYNISKCAEIAGLRSKIIAASYATDPKISKK KRQLSVATSIIYEAQNTVLSVLEPMEGRIAEARNAIRQLLGVAYQSNMTNRHMNFNQMIRKLWADFSAHEQLKGAIASIL VLVNQSDALRMLAEEIDMSMLGR
Sequences:
>Translated_183_residues MKYSYIDAYEDLLKQCLFIPDLVTKSANKELRFLGDFNQWLLDTEEVMKKYNISKCAEIAGLRSKIIAASYATDPKISKK KRQLSVATSIIYEAQNTVLSVLEPMEGRIAEARNAIRQLLGVAYQSNMTNRHMNFNQMIRKLWADFSAHEQLKGAIASIL VLVNQSDALRMLAEEIDMSMLGR >Mature_183_residues MKYSYIDAYEDLLKQCLFIPDLVTKSANKELRFLGDFNQWLLDTEEVMKKYNISKCAEIAGLRSKIIAASYATDPKISKK KRQLSVATSIIYEAQNTVLSVLEPMEGRIAEARNAIRQLLGVAYQSNMTNRHMNFNQMIRKLWADFSAHEQLKGAIASIL VLVNQSDALRMLAEEIDMSMLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20843; Mature: 20843
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSYIDAYEDLLKQCLFIPDLVTKSANKELRFLGDFNQWLLDTEEVMKKYNISKCAEIA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHH GLRSKIIAASYATDPKISKKKRQLSVATSIIYEAQNTVLSVLEPMEGRIAEARNAIRQLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVAYQSNMTNRHMNFNQMIRKLWADFSAHEQLKGAIASILVLVNQSDALRMLAEEIDMSM HHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LGR HCC >Mature Secondary Structure MKYSYIDAYEDLLKQCLFIPDLVTKSANKELRFLGDFNQWLLDTEEVMKKYNISKCAEIA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHH GLRSKIIAASYATDPKISKKKRQLSVATSIIYEAQNTVLSVLEPMEGRIAEARNAIRQLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVAYQSNMTNRHMNFNQMIRKLWADFSAHEQLKGAIASILVLVNQSDALRMLAEEIDMSM HHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LGR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA