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The map label for this gene is yjgF [C]

Identifier: 119945793

GI number: 119945793

Start: 2595391

End: 2595789

Strand: Reverse

Name: yjgF [C]

Synonym: Ping_2129

Alternate gene names: 119945793

Gene position: 2595789-2595391 (Counterclockwise)

Preceding gene: 119945798

Following gene: 119945792

Centisome position: 56.93

GC content: 45.36

Gene sequence:

>399_bases
ATGAACACTCAAAATAAAAAACATCTGGTTAAGACATCTCTTTTCGCTTCAAAAGCACCACTTGAATGGGCAATTGTCAA
TAATGGTACGCTCTATACAGCACAAATTCCCATTGATGATACTGGTGCGGTAGTCGCAGGTGGAATAGAAGCTCAAACTC
GGCAAACCCTCAATAACCTTGTTCATACATTGGAATGTGCCGGTGAATCGTTGGATTCAGTGCTTCAAGTACTGATTTAC
GTGACTGATCGCGAGTATCTGAAAACCGTGAACAGCGTTTACGCTGAATATTTCAACGCCCCTTACCCAAACCGTGCAGC
CATGGTTGTTGCAGGGCTAGCACGCGAAGAAATGCTGGTGGAATTTGTGGTCTATGCCGCGGCCTCTCAGCCTGAATAG

Upstream 100 bases:

>100_bases
TGACAGAATTTTACCGTTTTGCTTATCACCAGTCAAAGAGTAATGTACAGCCATCTTGTTGCACAGTTGTTAATTAGCTG
TTAAATATTTGGATCAAAAC

Downstream 100 bases:

>100_bases
CTAAAAAATTAACAAAATTAACAAAATAAGCAAATTAAAACAGTTTCAATCGTTCTCCTATTTACATAACCGGCCGGCAG
AATAAAATGCAGCTAAATCA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNTQNKKHLVKTSLFASKAPLEWAIVNNGTLYTAQIPIDDTGAVVAGGIEAQTRQTLNNLVHTLECAGESLDSVLQVLIY
VTDREYLKTVNSVYAEYFNAPYPNRAAMVVAGLAREEMLVEFVVYAAASQPE

Sequences:

>Translated_132_residues
MNTQNKKHLVKTSLFASKAPLEWAIVNNGTLYTAQIPIDDTGAVVAGGIEAQTRQTLNNLVHTLECAGESLDSVLQVLIY
VTDREYLKTVNSVYAEYFNAPYPNRAAMVVAGLAREEMLVEFVVYAAASQPE
>Mature_132_residues
MNTQNKKHLVKTSLFASKAPLEWAIVNNGTLYTAQIPIDDTGAVVAGGIEAQTRQTLNNLVHTLECAGESLDSVLQVLIY
VTDREYLKTVNSVYAEYFNAPYPNRAAMVVAGLAREEMLVEFVVYAAASQPE

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320899, Length=88, Percent_Identity=37.5, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14466; Mature: 14466

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQNKKHLVKTSLFASKAPLEWAIVNNGTLYTAQIPIDDTGAVVAGGIEAQTRQTLNNL
CCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCEEECCCCHHHHHHHHHH
VHTLECAGESLDSVLQVLIYVTDREYLKTVNSVYAEYFNAPYPNRAAMVVAGLAREEMLV
HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EFVVYAAASQPE
HHHHHHHCCCCC
>Mature Secondary Structure
MNTQNKKHLVKTSLFASKAPLEWAIVNNGTLYTAQIPIDDTGAVVAGGIEAQTRQTLNNL
CCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCEEECCCCHHHHHHHHHH
VHTLECAGESLDSVLQVLIYVTDREYLKTVNSVYAEYFNAPYPNRAAMVVAGLAREEMLV
HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EFVVYAAASQPE
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]