| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945785
Identifier: 119945785
GI number: 119945785
Start: 2583236
End: 2583949
Strand: Direct
Name: 119945785
Synonym: Ping_2121
Alternate gene names: NA
Gene position: 2583236-2583949 (Clockwise)
Preceding gene: 119945784
Following gene: 119945794
Centisome position: 56.65
GC content: 44.26
Gene sequence:
>714_bases TTGCTCAATCAATCCTATCAAAACTTACGTGCCTCTATTCGTCGCTTAATGGACAGTGGCGCCACATCGTCAGAACAGTT AACTAGGCTGGAGAGTGAGCTTGATGCTGAGTTATCATGGGCGACGGCAAATCGAGTGGAGCTGGCATTGGTCGATTACT ATGATGACGTTAAACTGGTCACTGAATGGCAGCGCCGATTGGCAGAAATCGATAATTTTCCAGCCCAGATAGCAGCGTTT TACAAAGAACAAATACAAGAAACGGAGCTACCCGTGGTGCGTTCATTAATGAGCCGTTTAGTTTTCGATCTGCAGTGGGT TATAGAATCTAAGCGAGTTGTCCGTTTTAATGAGAACCGTATGCGTCGAAATATTGTGGCGACTTCTTTGTGTGCCTTTA TTTTATTTTTCAGCCCCTCTATTTCACGTGTTTTGTTTTCTCTGGAATTTGAAAATTTACGTTTTTATTATACTTTTACC GCAGCAACGGCGGGTATTTTAGGGGCTGCTTTTAGCCAGCTCACGTCGATTCGGTCTCGCATGCAGGCTGCAAGGGTTGA CCAGATGCATGCCATCAGTCAATTAGGTTATATTCTTACTCGTGCGATGGTAGGCGCCGGGGCAGGTTTAATCATGTTTT ATCTGGTGCAGTCCGACTTATTAAGCGGCGCATTTTTTCCTGCATTTATTCATACTCCCGAAGAGCTTTTATAA
Upstream 100 bases:
>100_bases TCGCTTATTTTTGAGTCTTATAGTTTTCAGCTCTGCCAATGGGAGAGATACAAGTGAACACCATACTTACGGTCAATCAG TTAATTCAGCGTGAGAATAT
Downstream 100 bases:
>100_bases TATAAACAGAGCATCAATCTGTTATCTAAAAATTATTATGCAGTCTCTCAAGCAGTGGAATCTTCTTACGCCATTGGTAC GTTAGTGCAACCTGCGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLNQSYQNLRASIRRLMDSGATSSEQLTRLESELDAELSWATANRVELALVDYYDDVKLVTEWQRRLAEIDNFPAQIAAF YKEQIQETELPVVRSLMSRLVFDLQWVIESKRVVRFNENRMRRNIVATSLCAFILFFSPSISRVLFSLEFENLRFYYTFT AATAGILGAAFSQLTSIRSRMQAARVDQMHAISQLGYILTRAMVGAGAGLIMFYLVQSDLLSGAFFPAFIHTPEELL
Sequences:
>Translated_237_residues MLNQSYQNLRASIRRLMDSGATSSEQLTRLESELDAELSWATANRVELALVDYYDDVKLVTEWQRRLAEIDNFPAQIAAF YKEQIQETELPVVRSLMSRLVFDLQWVIESKRVVRFNENRMRRNIVATSLCAFILFFSPSISRVLFSLEFENLRFYYTFT AATAGILGAAFSQLTSIRSRMQAARVDQMHAISQLGYILTRAMVGAGAGLIMFYLVQSDLLSGAFFPAFIHTPEELL >Mature_237_residues MLNQSYQNLRASIRRLMDSGATSSEQLTRLESELDAELSWATANRVELALVDYYDDVKLVTEWQRRLAEIDNFPAQIAAF YKEQIQETELPVVRSLMSRLVFDLQWVIESKRVVRFNENRMRRNIVATSLCAFILFFSPSISRVLFSLEFENLRFYYTFT AATAGILGAAFSQLTSIRSRMQAARVDQMHAISQLGYILTRAMVGAGAGLIMFYLVQSDLLSGAFFPAFIHTPEELL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27080; Mature: 27080
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNQSYQNLRASIRRLMDSGATSSEQLTRLESELDAELSWATANRVELALVDYYDDVKLV CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEECCCCEEEEEECHHHHHHHH TEWQRRLAEIDNFPAQIAAFYKEQIQETELPVVRSLMSRLVFDLQWVIESKRVVRFNENR HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHEEECHHH MRRNIVATSLCAFILFFSPSISRVLFSLEFENLRFYYTFTAATAGILGAAFSQLTSIRSR HHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHH MQAARVDQMHAISQLGYILTRAMVGAGAGLIMFYLVQSDLLSGAFFPAFIHTPEELL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHC >Mature Secondary Structure MLNQSYQNLRASIRRLMDSGATSSEQLTRLESELDAELSWATANRVELALVDYYDDVKLV CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHEECCCCEEEEEECHHHHHHHH TEWQRRLAEIDNFPAQIAAFYKEQIQETELPVVRSLMSRLVFDLQWVIESKRVVRFNENR HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHEEECHHH MRRNIVATSLCAFILFFSPSISRVLFSLEFENLRFYYTFTAATAGILGAAFSQLTSIRSR HHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHH MQAARVDQMHAISQLGYILTRAMVGAGAGLIMFYLVQSDLLSGAFFPAFIHTPEELL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA