| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945779
Identifier: 119945779
GI number: 119945779
Start: 2572545
End: 2574194
Strand: Reverse
Name: 119945779
Synonym: Ping_2114
Alternate gene names: NA
Gene position: 2574194-2572545 (Counterclockwise)
Preceding gene: 119945780
Following gene: 119945778
Centisome position: 56.46
GC content: 40.36
Gene sequence:
>1650_bases ATGAATATCAATATATCCAGTACTGAGCCAACCAAAGTAATTATGCTTCGAAAGGCGTTACGTTTGTTCAGTTTATCGAG TATTGTCTTAGCAAGCAGTTTCTTGTTCCCGGCAGAAGCATTAGCCCAATGTGAGCCAGGTCCACATGAAGTCGCTTTTT TTCAGCACGCTAACTTCGAAGGAAAGTGTAAAGTTCTAGGTCTGAAAGATTACAAAAATTCATCGGATCTAGGTATAAAG AATGATTCAATTTCCTCGGTAAAAGTGGGGGCTGAGGTTCAAGCATTTGTTTGCAAAGACTCCTTTTACAGAGGTGAATG TGAGGTTCTTAATAAAAATCACAAAACCCTACGCAATAATGTAGTCAAAGGTGACACCATTTCTTCAGCAAAAATTCAGC TCCGAAATGGCTCCGCATCCTGTACACCAGGTCGGAATCAAGTTGCTTTTTATCAACACACAAATTATAAAGGGGCATGT CAGGTTCGAGGACTTGGTCGTTATGAAAACTCCCTTAAGATAGGGCTTAAAAATGACACAATATCCTCAGTTAAGCTAGG GACTAATTCCCAAGCCGTTTTGTGTAGAGACTCGAATTTCCAAGGACACTGTATCGTCCTTAAAGAAAACAGGCCTACCC TCAAATCATGGCATGTTGGCAATGATGAAACATCTTCAGCTAAAGTACAAGAACTCGGAACTCAGGAATGTCAGCCTAAG GCAGACCAAGTCGCTCTTTTTATGCACAGTAATTTTGTTGCACCTTGTGTAGTAAAGAATATGGGTCTATATGGAAACTC GAGTAAAATTGGTTTGAAAAATGATTCGATTTCTTCTGTCATAATTGGTCGAGATTCACAAGTATTGTTATGTGAACATT CTAATTTTAAAAATTGTGTGGAGTTAAAGGGCAGTGACAGTAATCTAGGAGATAACCGTATTGGGCATGATCAGGTCTCA TCGTTAAAGGTACAGCCAAGAGGTTTCAAGGATTGCATTCCTGACTCTAATGAGGCGTCATTCTTTGAGGACAGTGGTTA CGTAGGTACATGCAAAGTGAAGAGCATCGGAGATTATAATAATGCCGCTAGTATTGGCCTGGCGAACAATTCAATCTCTT CGATTAGGGTTGGTTCGTCCATTCAAGTATGTGCCTGTGGGGGTGATGATTTCACTCAAATATGTGAGGCATTTACAATG GACGATCCGAGTCTTGATAACAACTTCCCTATCTATACGACCGGTAATGATTTAATTTCTTCTATAAAGGTTCAAATGCG AGGATCTGAATGCAAAGTGAAATCAATACCGCCTGATCCACAAGATGTTTTTAAGCAGATATCCGTTTTTAATTGCCATA CTGATATGCGAAGTGTTCATTTATGGACGCGAAACATTACCATAGGTGCTCCTTTTGTTGAGAGAGGCGTGTTGTCACCC CAATATTCAAATGGCAGCTGCCCTAGTGGCGCTTCACCGCGTGTGATTTCTCTTATCGATGGATATTTATTTGAATTCGT AGTAGTAGACACTGGCCAGCTGACTTGTGAAGGACGAAATGATCCATCGCTAGGCAATTGTATAAGGATGCCAAGTCGAT TTATTCTTGGGGATGATGATGGCCTGAGTTTGAATATAAAAGTACATTAA
Upstream 100 bases:
>100_bases GTGAACAGCATTAAAGGAATGCATAACAATCGCATCAAAGGAGACGTTCGTACCTCACGCGCTTTATTCAGGCGTTAGAC ATAAATAGAGGAGAAAGCAT
Downstream 100 bases:
>100_bases TAAGCAAGAAAATATGATGAATAAAAAAACTAAGCCAGCCAAGGTTGTTGTCTAGTGTTTAAGCATTGATCTAGGCTTTA GTTATTTTTATTTACTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MNINISSTEPTKVIMLRKALRLFSLSSIVLASSFLFPAEALAQCEPGPHEVAFFQHANFEGKCKVLGLKDYKNSSDLGIK NDSISSVKVGAEVQAFVCKDSFYRGECEVLNKNHKTLRNNVVKGDTISSAKIQLRNGSASCTPGRNQVAFYQHTNYKGAC QVRGLGRYENSLKIGLKNDTISSVKLGTNSQAVLCRDSNFQGHCIVLKENRPTLKSWHVGNDETSSAKVQELGTQECQPK ADQVALFMHSNFVAPCVVKNMGLYGNSSKIGLKNDSISSVIIGRDSQVLLCEHSNFKNCVELKGSDSNLGDNRIGHDQVS SLKVQPRGFKDCIPDSNEASFFEDSGYVGTCKVKSIGDYNNAASIGLANNSISSIRVGSSIQVCACGGDDFTQICEAFTM DDPSLDNNFPIYTTGNDLISSIKVQMRGSECKVKSIPPDPQDVFKQISVFNCHTDMRSVHLWTRNITIGAPFVERGVLSP QYSNGSCPSGASPRVISLIDGYLFEFVVVDTGQLTCEGRNDPSLGNCIRMPSRFILGDDDGLSLNIKVH
Sequences:
>Translated_549_residues MNINISSTEPTKVIMLRKALRLFSLSSIVLASSFLFPAEALAQCEPGPHEVAFFQHANFEGKCKVLGLKDYKNSSDLGIK NDSISSVKVGAEVQAFVCKDSFYRGECEVLNKNHKTLRNNVVKGDTISSAKIQLRNGSASCTPGRNQVAFYQHTNYKGAC QVRGLGRYENSLKIGLKNDTISSVKLGTNSQAVLCRDSNFQGHCIVLKENRPTLKSWHVGNDETSSAKVQELGTQECQPK ADQVALFMHSNFVAPCVVKNMGLYGNSSKIGLKNDSISSVIIGRDSQVLLCEHSNFKNCVELKGSDSNLGDNRIGHDQVS SLKVQPRGFKDCIPDSNEASFFEDSGYVGTCKVKSIGDYNNAASIGLANNSISSIRVGSSIQVCACGGDDFTQICEAFTM DDPSLDNNFPIYTTGNDLISSIKVQMRGSECKVKSIPPDPQDVFKQISVFNCHTDMRSVHLWTRNITIGAPFVERGVLSP QYSNGSCPSGASPRVISLIDGYLFEFVVVDTGQLTCEGRNDPSLGNCIRMPSRFILGDDDGLSLNIKVH >Mature_549_residues MNINISSTEPTKVIMLRKALRLFSLSSIVLASSFLFPAEALAQCEPGPHEVAFFQHANFEGKCKVLGLKDYKNSSDLGIK NDSISSVKVGAEVQAFVCKDSFYRGECEVLNKNHKTLRNNVVKGDTISSAKIQLRNGSASCTPGRNQVAFYQHTNYKGAC QVRGLGRYENSLKIGLKNDTISSVKLGTNSQAVLCRDSNFQGHCIVLKENRPTLKSWHVGNDETSSAKVQELGTQECQPK ADQVALFMHSNFVAPCVVKNMGLYGNSSKIGLKNDSISSVIIGRDSQVLLCEHSNFKNCVELKGSDSNLGDNRIGHDQVS SLKVQPRGFKDCIPDSNEASFFEDSGYVGTCKVKSIGDYNNAASIGLANNSISSIRVGSSIQVCACGGDDFTQICEAFTM DDPSLDNNFPIYTTGNDLISSIKVQMRGSECKVKSIPPDPQDVFKQISVFNCHTDMRSVHLWTRNITIGAPFVERGVLSP QYSNGSCPSGASPRVISLIDGYLFEFVVVDTGQLTCEGRNDPSLGNCIRMPSRFILGDDDGLSLNIKVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59771; Mature: 59771
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS50915 CRYSTALLIN_BETA_GAMMA L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINISSTEPTKVIMLRKALRLFSLSSIVLASSFLFPAEALAQCEPGPHEVAFFQHANFE CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCC GKCKVLGLKDYKNSSDLGIKNDSISSVKVGAEVQAFVCKDSFYRGECEVLNKNHKTLRNN CEEEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCEEEEECCCHHHHHHC VVKGDTISSAKIQLRNGSASCTPGRNQVAFYQHTNYKGACQVRGLGRYENSLKIGLKNDT CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCC ISSVKLGTNSQAVLCRDSNFQGHCIVLKENRPTLKSWHVGNDETSSAKVQELGTQECQPK CCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCCHHHHHCCCCCCCCC ADQVALFMHSNFVAPCVVKNMGLYGNSSKIGLKNDSISSVIIGRDSQVLLCEHSNFKNCV CCEEEEEEECCCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEECCCEEEEEECCCCCCEE ELKGSDSNLGDNRIGHDQVSSLKVQPRGFKDCIPDSNEASFFEDSGYVGTCKVKSIGDYN EECCCCCCCCCCCCCCCHHHEEEECCCCCHHCCCCCCCCCEEECCCCEEEEEEEECCCCC NAASIGLANNSISSIRVGSSIQVCACGGDDFTQICEAFTMDDPSLDNNFPIYTTGNDLIS CCEEEEECCCCCCEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEECCHHHHE SIKVQMRGSECKVKSIPPDPQDVFKQISVFNCHTDMRSVHLWTRNITIGAPFVERGVLSP EEEEEECCCCEEEECCCCCHHHHHHHHEEEEECCCCEEEEEEEEEEEECCCHHHHCCCCC QYSNGSCPSGASPRVISLIDGYLFEFVVVDTGQLTCEGRNDPSLGNCIRMPSRFILGDDD CCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCEEEECCCCCCCCCHHHCCCCEEEEECCC GLSLNIKVH CCEEEEEEC >Mature Secondary Structure MNINISSTEPTKVIMLRKALRLFSLSSIVLASSFLFPAEALAQCEPGPHEVAFFQHANFE CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCC GKCKVLGLKDYKNSSDLGIKNDSISSVKVGAEVQAFVCKDSFYRGECEVLNKNHKTLRNN CEEEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCEEEEECCCHHHHHHC VVKGDTISSAKIQLRNGSASCTPGRNQVAFYQHTNYKGACQVRGLGRYENSLKIGLKNDT CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCC ISSVKLGTNSQAVLCRDSNFQGHCIVLKENRPTLKSWHVGNDETSSAKVQELGTQECQPK CCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCCHHHHHCCCCCCCCC ADQVALFMHSNFVAPCVVKNMGLYGNSSKIGLKNDSISSVIIGRDSQVLLCEHSNFKNCV CCEEEEEEECCCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEECCCEEEEEECCCCCCEE ELKGSDSNLGDNRIGHDQVSSLKVQPRGFKDCIPDSNEASFFEDSGYVGTCKVKSIGDYN EECCCCCCCCCCCCCCCHHHEEEECCCCCHHCCCCCCCCCEEECCCCEEEEEEEECCCCC NAASIGLANNSISSIRVGSSIQVCACGGDDFTQICEAFTMDDPSLDNNFPIYTTGNDLIS CCEEEEECCCCCCEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEECCHHHHE SIKVQMRGSECKVKSIPPDPQDVFKQISVFNCHTDMRSVHLWTRNITIGAPFVERGVLSP EEEEEECCCCEEEECCCCCHHHHHHHHEEEEECCCCEEEEEEEEEEEECCCHHHHCCCCC QYSNGSCPSGASPRVISLIDGYLFEFVVVDTGQLTCEGRNDPSLGNCIRMPSRFILGDDD CCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCEEEECCCCCCCCCHHHCCCCEEEEECCC GLSLNIKVH CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA