| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945775
Identifier: 119945775
GI number: 119945775
Start: 2568856
End: 2569365
Strand: Direct
Name: 119945775
Synonym: Ping_2110
Alternate gene names: NA
Gene position: 2568856-2569365 (Clockwise)
Preceding gene: 119945774
Following gene: 119945782
Centisome position: 56.34
GC content: 39.02
Gene sequence:
>510_bases ATGACAAATATAAACAATGGCCTGGCTGAAGATATTGACTTTAACAGCAAAAAATTTATTAACAGCTGGCAGGTAGTCAA TGATTCAGTGATGGGGGGAATTTCAACAAGCAAAATAGCAATTGAAAACAATATTGTCTCCTTTAGCGGCCAGCTTTCAT TCGAAAACAACGGGGGTTTTGCTTCAGCCCGATACGTTCTCAATAAACCGATAATAGCGAAAGACAAGGTATCTATTACT TTCAAAGGAGATAATCGCCATTACCAGTTACGTTTAAGAACCAATACAGGGCCGGGTGCGATTGCCTACAAGGTTGATTT TTATGCCACGGCGAATAACTGGAACAGTTTGATTTTTAAGAAAAGCGACTTTATTCCTACCTACCGCGGGGCAACCGTTG ACGATGCGCCACAGTTAAATTTGGCAGACGTTAAACAAATTAGTATTCTAATTGCAGACAAACAGTTACCCGCTTTTCAG TTAGATATTAGTCAGATTGGTTTTTTATAA
Upstream 100 bases:
>100_bases ACGCATCTATTGCGCAGCTGTATACCTAACAATATACTTGCCGGACTGACTTGGAATAAACGCTTTAAATATGAAATATG TACTAATTTTGGTGATCATA
Downstream 100 bases:
>100_bases ATGCGCCAAAATTAAGGCTCACTCAGGCACTTAAACGAAAGAAGCTTAAAGTCCGTCACCGCCTTGCGTGAAAATATGCA GCGGATTAAGAATAAAAGAA
Product: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30
Products: NA
Alternate protein names: NmrA-Like; Exonuclease
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTNINNGLAEDIDFNSKKFINSWQVVNDSVMGGISTSKIAIENNIVSFSGQLSFENNGGFASARYVLNKPIIAKDKVSIT FKGDNRHYQLRLRTNTGPGAIAYKVDFYATANNWNSLIFKKSDFIPTYRGATVDDAPQLNLADVKQISILIADKQLPAFQ LDISQIGFL
Sequences:
>Translated_169_residues MTNINNGLAEDIDFNSKKFINSWQVVNDSVMGGISTSKIAIENNIVSFSGQLSFENNGGFASARYVLNKPIIAKDKVSIT FKGDNRHYQLRLRTNTGPGAIAYKVDFYATANNWNSLIFKKSDFIPTYRGATVDDAPQLNLADVKQISILIADKQLPAFQ LDISQIGFL >Mature_168_residues TNINNGLAEDIDFNSKKFINSWQVVNDSVMGGISTSKIAIENNIVSFSGQLSFENNGGFASARYVLNKPIIAKDKVSITF KGDNRHYQLRLRTNTGPGAIAYKVDFYATANNWNSLIFKKSDFIPTYRGATVDDAPQLNLADVKQISILIADKQLPAFQL DISQIGFL
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18700; Mature: 18569
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNINNGLAEDIDFNSKKFINSWQVVNDSVMGGISTSKIAIENNIVSFSGQLSFENNGGF CCCCCCCCCCCCCCCCCHHCCEEEEECCHHCCCCCCCEEEEECCEEEEEEEEEEECCCCE ASARYVLNKPIIAKDKVSITFKGDNRHYQLRLRTNTGPGAIAYKVDFYATANNWNSLIFK EEEEEEECCCEEECCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEE KSDFIPTYRGATVDDAPQLNLADVKQISILIADKQLPAFQLDISQIGFL CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEHHHHCCC >Mature Secondary Structure TNINNGLAEDIDFNSKKFINSWQVVNDSVMGGISTSKIAIENNIVSFSGQLSFENNGGF CCCCCCCCCCCCCCCCHHCCEEEEECCHHCCCCCCCEEEEECCEEEEEEEEEEECCCCE ASARYVLNKPIIAKDKVSITFKGDNRHYQLRLRTNTGPGAIAYKVDFYATANNWNSLIFK EEEEEEECCCEEECCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEE KSDFIPTYRGATVDDAPQLNLADVKQISILIADKQLPAFQLDISQIGFL CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA