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The map label for this gene is ygeA [H]

Identifier: 119945765

GI number: 119945765

Start: 2553735

End: 2554424

Strand: Reverse

Name: ygeA [H]

Synonym: Ping_2098

Alternate gene names: 119945765

Gene position: 2554424-2553735 (Counterclockwise)

Preceding gene: 119945768

Following gene: 119945759

Centisome position: 56.02

GC content: 38.12

Gene sequence:

>690_bases
ATGAAAACAGTTGGTCTTTTAGGTGGTATGAGCTGGGAAAGTACTATTGGCTACTACCGTGCAATTAATGAAGGTATTAA
AAACTCACTCGGTGGGCTGCACTCAGCGAAAATCGTTATATATAGCGTCGATTTCGATCCAATTGAAAAGTTACAGCACG
AGGGGGATTGGGACGGGACAGCGGAAATACTTATTGAAGCAGCTAAGAATGTGCAATCTGCTGGAGCTGACTTTTTACTT
ATATGCACAAATACTATGCATAAAGTAGCGCCACAGATAGAAAAAGCTATTGATATTCCATTACTTCATATTGCAGATGC
AACCGCCGAGGTTCTGGTCAAAAATGGAATTAAAACCGTGGGGTTACTGGGAACCGCTTTTACAATGGAACAAGATTTTT
ATAAGAGTAGGTTAAGCGAAAATTATGGTTTAACGGTTTTGGTTCCTAATGAAATAGACAGAGCAATTATTCATAATGTT
ATTTATAAAGAGCTTTGTTTAGGGAAAATGTTGCCTGCTTCTAAAGTCGAATATTTGCGAATTATTGAATCTTTAGCTAA
TCAGGGCGCTGAGGCTGTCATTCTTGGTTGTACTGAAATTGGAATGCTCGTTGAGCAAGCTGATACTAAAGTCACACTTT
TAGATACAGCAGCTATTCATGCTCAAAAAGCAGTTGAATATGCAATATAA

Upstream 100 bases:

>100_bases
TTATTTTGTGGGCATGGTTATATTGTGGTTTTTTATTCCGACGGGCTGAAAATGAGAAATTCTACAGCCTTGTGATTTTA
CAAATGCATTTAGAGGTAAT

Downstream 100 bases:

>100_bases
TAAATGAAATTACTGGACACATAATGGTTATTGCGGTTTTGCTAAGAACGATAAGCATTAAAACAGCACAAAATACAGCA
GGCTATTGTCGATTAATATG

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKTVGLLGGMSWESTIGYYRAINEGIKNSLGGLHSAKIVIYSVDFDPIEKLQHEGDWDGTAEILIEAAKNVQSAGADFLL
ICTNTMHKVAPQIEKAIDIPLLHIADATAEVLVKNGIKTVGLLGTAFTMEQDFYKSRLSENYGLTVLVPNEIDRAIIHNV
IYKELCLGKMLPASKVEYLRIIESLANQGAEAVILGCTEIGMLVEQADTKVTLLDTAAIHAQKAVEYAI

Sequences:

>Translated_229_residues
MKTVGLLGGMSWESTIGYYRAINEGIKNSLGGLHSAKIVIYSVDFDPIEKLQHEGDWDGTAEILIEAAKNVQSAGADFLL
ICTNTMHKVAPQIEKAIDIPLLHIADATAEVLVKNGIKTVGLLGTAFTMEQDFYKSRLSENYGLTVLVPNEIDRAIIHNV
IYKELCLGKMLPASKVEYLRIIESLANQGAEAVILGCTEIGMLVEQADTKVTLLDTAAIHAQKAVEYAI
>Mature_229_residues
MKTVGLLGGMSWESTIGYYRAINEGIKNSLGGLHSAKIVIYSVDFDPIEKLQHEGDWDGTAEILIEAAKNVQSAGADFLL
ICTNTMHKVAPQIEKAIDIPLLHIADATAEVLVKNGIKTVGLLGTAFTMEQDFYKSRLSENYGLTVLVPNEIDRAIIHNV
IYKELCLGKMLPASKVEYLRIIESLANQGAEAVILGCTEIGMLVEQADTKVTLLDTAAIHAQKAVEYAI

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=229, Percent_Identity=54.1484716157205, Blast_Score=267, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 24901; Mature: 24901

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVGLLGGMSWESTIGYYRAINEGIKNSLGGLHSAKIVIYSVDFDPIEKLQHEGDWDGT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCHH
AEILIEAAKNVQSAGADFLLICTNTMHKVAPQIEKAIDIPLLHIADATAEVLVKNGIKTV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHH
GLLGTAFTMEQDFYKSRLSENYGLTVLVPNEIDRAIIHNVIYKELCLGKMLPASKVEYLR
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IIESLANQGAEAVILGCTEIGMLVEQADTKVTLLDTAAIHAQKAVEYAI
HHHHHHCCCCCEEEEEHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTVGLLGGMSWESTIGYYRAINEGIKNSLGGLHSAKIVIYSVDFDPIEKLQHEGDWDGT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCHH
AEILIEAAKNVQSAGADFLLICTNTMHKVAPQIEKAIDIPLLHIADATAEVLVKNGIKTV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHH
GLLGTAFTMEQDFYKSRLSENYGLTVLVPNEIDRAIIHNVIYKELCLGKMLPASKVEYLR
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IIESLANQGAEAVILGCTEIGMLVEQADTKVTLLDTAAIHAQKAVEYAI
HHHHHHCCCCCEEEEEHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]