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The map label for this gene is ygeX [H]

Identifier: 119945710

GI number: 119945710

Start: 2475707

End: 2476879

Strand: Direct

Name: ygeX [H]

Synonym: Ping_2030

Alternate gene names: 119945710

Gene position: 2475707-2476879 (Clockwise)

Preceding gene: 119945709

Following gene: 119945722

Centisome position: 54.3

GC content: 41.86

Gene sequence:

>1173_bases
ATGATCAATGTAAGTGCAAACTCATTTTTTAATGCTCAATCTTCCAAATTATTTACCCAAGATATAGCTGCTCAAGCTCA
ATCGTTTCACCAGAAAATTGAAGGTTATACACCGACGCCGTTAATCTCGTTACCTGTACTTGCTAAGTCTCTTGGACTTA
AAAATATTTTAGCTAAAGATGAATCACATCGTTTTGGGCTCAATGCTTTTAAAGTGCTTGGTGGCTCTTACGCATTAGGT
CAATTACTGGCTGAAAAACTAAATATGTCTCTTTCAGATATTGACCTTAAAACAGTTGCATCCAAGTTCGATTCACCAAT
GGTATTTACTACTGCAACGGCGGGTAATCACGGAACAGGCGTTGCTTGGGCGGCTCGAGAAATGGGCCAGAAAGCGGTAG
TTTACATGCCTAAAGGCGCAGCACAAACGAGTGTTGAACGGATTCGTGGTTTAGGTGCAGAATGCATTGTTACCGATGTT
AATTATGATGATACGGTACGACTTGCAAACCAAACAGCACAAGAAAATAATTGGGAATTAGTACAAGATACTGCTTGGGA
TGGATACGAACAGATTCCGACATGGATATCACAAGGCTACATGACAATGGCTGCTGAAGCGCTCACTCAGCTTGATGGTA
TAAAACCAACGCATCTTCTTTTACAAGCCGGTGTTGGTGCAATGGCAGGCGGTGTCTTAGGGTATTATGCGGATGCATTA
GGTGCTGATAATATCACTTCTGTGATTGTTGAACCTGAAAATGTAGCCTGTATTTATCTTTCTGGAACAAGCGCTGATGG
CGAGGTAAAGGCCGTTAGCGGAGAGTTAAACAGTATCATGACCGGTCTTGCTTGTGGAGAGCCCAATCCTGTTACGTGGC
CAATTCTTAAAAATTGTAGCAAATATTTTGTCTCCGTCGGTGATAATGTGACTGCCACAGGTATGCGGGTTTTAGCAAAC
CCACTTCCAGGTGATCAAGCTATTATCAGTGGTGAATCAGGTGCGATCACATTAGGTTTACTTTACGCATTAGCACAATC
AGAAACGGGTAAGGCACAAGCAAAAGAGTTAGGGCTAAATGAAGAGTCTGTCGTACTTATCTTTAGTACTGAAGGGGATA
TTAACCCAGCAAGCTATCAAAACATTGTTTGGAATGGCCAATATCCACTATAA

Upstream 100 bases:

>100_bases
TAATAAATTTCATACTGAATTATGTCAGCATAAAAAGAGGTTATATTGATAACCTCTTTAATTATCTATTTTATTTTTAC
TTTTTTACTTAGGTAACCTT

Downstream 100 bases:

>100_bases
GTGAATTGAATAGTGGGAATATACAGTGCTTTTTATAAGTTAGTCAGAGTGTATTTCCATTATTTTTTATCTTTGGGTAG
TAATAAAATCACCAAAAAAA

Product: diaminopropionate ammonia-lyase

Products: NA

Alternate protein names: Diaminopropionatase; Alpha,beta-diaminopropionate ammonia-lyase [H]

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MINVSANSFFNAQSSKLFTQDIAAQAQSFHQKIEGYTPTPLISLPVLAKSLGLKNILAKDESHRFGLNAFKVLGGSYALG
QLLAEKLNMSLSDIDLKTVASKFDSPMVFTTATAGNHGTGVAWAAREMGQKAVVYMPKGAAQTSVERIRGLGAECIVTDV
NYDDTVRLANQTAQENNWELVQDTAWDGYEQIPTWISQGYMTMAAEALTQLDGIKPTHLLLQAGVGAMAGGVLGYYADAL
GADNITSVIVEPENVACIYLSGTSADGEVKAVSGELNSIMTGLACGEPNPVTWPILKNCSKYFVSVGDNVTATGMRVLAN
PLPGDQAIISGESGAITLGLLYALAQSETGKAQAKELGLNEESVVLIFSTEGDINPASYQNIVWNGQYPL

Sequences:

>Translated_390_residues
MINVSANSFFNAQSSKLFTQDIAAQAQSFHQKIEGYTPTPLISLPVLAKSLGLKNILAKDESHRFGLNAFKVLGGSYALG
QLLAEKLNMSLSDIDLKTVASKFDSPMVFTTATAGNHGTGVAWAAREMGQKAVVYMPKGAAQTSVERIRGLGAECIVTDV
NYDDTVRLANQTAQENNWELVQDTAWDGYEQIPTWISQGYMTMAAEALTQLDGIKPTHLLLQAGVGAMAGGVLGYYADAL
GADNITSVIVEPENVACIYLSGTSADGEVKAVSGELNSIMTGLACGEPNPVTWPILKNCSKYFVSVGDNVTATGMRVLAN
PLPGDQAIISGESGAITLGLLYALAQSETGKAQAKELGLNEESVVLIFSTEGDINPASYQNIVWNGQYPL
>Mature_390_residues
MINVSANSFFNAQSSKLFTQDIAAQAQSFHQKIEGYTPTPLISLPVLAKSLGLKNILAKDESHRFGLNAFKVLGGSYALG
QLLAEKLNMSLSDIDLKTVASKFDSPMVFTTATAGNHGTGVAWAAREMGQKAVVYMPKGAAQTSVERIRGLGAECIVTDV
NYDDTVRLANQTAQENNWELVQDTAWDGYEQIPTWISQGYMTMAAEALTQLDGIKPTHLLLQAGVGAMAGGVLGYYADAL
GADNITSVIVEPENVACIYLSGTSADGEVKAVSGELNSIMTGLACGEPNPVTWPILKNCSKYFVSVGDNVTATGMRVLAN
PLPGDQAIISGESGAITLGLLYALAQSETGKAQAKELGLNEESVVLIFSTEGDINPASYQNIVWNGQYPL

Specific function: Catalyzes the alpha,beta-elimination reaction of both L- and D-alpha,beta-diaminopropionate, the most suitable substrates to form pyruvate and ammonia. The L- and D-isomers of serine are also degraded, though slowly; it is the only serine dehydratase whic

COG id: COG1171

COG function: function code E; Threonine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789235, Length=389, Percent_Identity=54.4987146529563, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010081
- InterPro:   IPR019871
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.15 [H]

Molecular weight: Translated: 41370; Mature: 41370

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVSANSFFNAQSSKLFTQDIAAQAQSFHQKIEGYTPTPLISLPVLAKSLGLKNILAKD
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCHHHHHHCC
ESHRFGLNAFKVLGGSYALGQLLAEKLNMSLSDIDLKTVASKFDSPMVFTTATAGNHGTG
CCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
VAWAAREMGQKAVVYMPKGAAQTSVERIRGLGAECIVTDVNYDDTVRLANQTAQENNWEL
HHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEE
VQDTAWDGYEQIPTWISQGYMTMAAEALTQLDGIKPTHLLLQAGVGAMAGGVLGYYADAL
EECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHC
GADNITSVIVEPENVACIYLSGTSADGEVKAVSGELNSIMTGLACGEPNPVTWPILKNCS
CCCCCEEEEECCCCEEEEEEECCCCCCCEEEECCHHHHHHHHHCCCCCCCEECHHHHHHH
KYFVSVGDNVTATGMRVLANPLPGDQAIISGESGAITLGLLYALAQSETGKAQAKELGLN
HHHEECCCCEECCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHCCCC
EESVVLIFSTEGDINPASYQNIVWNGQYPL
CCCEEEEEECCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MINVSANSFFNAQSSKLFTQDIAAQAQSFHQKIEGYTPTPLISLPVLAKSLGLKNILAKD
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCHHHHHHCC
ESHRFGLNAFKVLGGSYALGQLLAEKLNMSLSDIDLKTVASKFDSPMVFTTATAGNHGTG
CCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
VAWAAREMGQKAVVYMPKGAAQTSVERIRGLGAECIVTDVNYDDTVRLANQTAQENNWEL
HHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEE
VQDTAWDGYEQIPTWISQGYMTMAAEALTQLDGIKPTHLLLQAGVGAMAGGVLGYYADAL
EECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHC
GADNITSVIVEPENVACIYLSGTSADGEVKAVSGELNSIMTGLACGEPNPVTWPILKNCS
CCCCCEEEEECCCCEEEEEEECCCCCCCEEEECCHHHHHHHHHCCCCCCCEECHHHHHHH
KYFVSVGDNVTATGMRVLANPLPGDQAIISGESGAITLGLLYALAQSETGKAQAKELGLN
HHHEECCCCEECCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHCCCC
EESVVLIFSTEGDINPASYQNIVWNGQYPL
CCCEEEEEECCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]