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The map label for this gene is 119945526

Identifier: 119945526

GI number: 119945526

Start: 2218707

End: 2220005

Strand: Direct

Name: 119945526

Synonym: Ping_1830

Alternate gene names: NA

Gene position: 2218707-2220005 (Clockwise)

Preceding gene: 119945525

Following gene: 119945527

Centisome position: 48.66

GC content: 45.73

Gene sequence:

>1299_bases
ATGCTAAAACGTATCGTTTATGGCGTATGTGGTGCAGCTATTGTAGGATTATGTGTATTTAGTATATACGCTTGGTACCC
TGCAATAGATCCCGTCATACCTGCTCAAACAGACTATTCTCCAGAGATTATCGAACAAGGTAGAGTCCTTGCCGCAGCAG
GTTATTGCAGCACTTGTCACACGCCATCAGGTGGAACGCCTTATGCAGGTAACTATGAAATGCACACCGACTTTGGCACC
ATTTATTCGAGTAACATCACCCCAGATGTCGAAACCGGTATTGGTAACTGGTCAGAAGCCGCTTTTAGCCGAGCGATGCG
CATTGGTGTGAGTCGTGATGGACATCATTTATTACCTGCGTTCCCTTATGAACACTTTAATAAAATGACCGACGCGGATA
TTAACGCCATTTATGCTTATATCATGACGTCTGTACCGGCCGTTAACCAAGTCAAAAAAGATAACGATATTCCGTTTCCG
CTCAATATCCGCTGGTTTCAAGCGGGTTGGAAACTTCTGTTTGCTGACACTCAACCTTTTGAAGTCAACAGCGAAAAATC
AGCCGAGTGGAACCGTGGCGCTTATTTAGCTGAAGGTGTTGCTCACTGTGGCGCATGTCATACTCCACGTAATGCACTTG
GCGGTGAAAAATATGACCAAATGTATCAAGGTGCTGCCATTGATGGTTGGATTGCACCCTCATTAACCTCTACCAGCACG
TCACCACTCCCTTGGCGTTCGCAAGATTTCTACGAATACCTCAGCACAGGTAATTCGCTTTACCATGGTAGTGCCGCAGG
TCCAATGGCACCGGTTATGCACGATGGTTTATCCGCTCTGCCAGACAGTGATCTTAGAGACATTAGCAATTATTTTGCCG
ATCTTGATCGCACTACCAAAATGGATGAATCACAATCTAATAAGATTTTACAAGCTGCAATAGACGCACAACATCAACAA
CCAGATCAACGGATCGATGAAGGTGCGCGTTTGTATGCCACTGCTTGCCAAGCATGTCATTACAGCAGCGACCAATTAGT
CAAAGGCCGGCTATTGATTACCATAGGCTCAGCGACTCATCTTGATAAGCCAACGAACCTGATTAACGTCATACTGGACG
GTGTTAGTAGCGATCAAGGAATCAGCGGCGTGGTAATGCCAGGATTCCGTGATGCACTTAGCGATCAAGACATTAGCGCA
ATAGCAGCTTATTTGCGTCAAACTGCAGGGGAAAACATCTGGCCTAAATTACAACAACAAGTGGGCGAGATCCGTAATCA
ACCCCGATTTGAGCAATAA

Upstream 100 bases:

>100_bases
AATTGTTCGCAAATATTAACTGTAATACAAAGCTAAACAGGGAATGTTAGCTAGCTAGATCACTCCCCCCCGATCTATTT
TTTAAATAAGGCAATGTAAT

Downstream 100 bases:

>100_bases
CTTCACTGGAGAAGTGCCAATGGCAAAATTTATTTTAAACGGCGAGCCGATGACTGCCGACGTAGAGAGCGATACTCCTC
TACTGTGGGTCATTCGTGAC

Product: cytochrome c, class I

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MLKRIVYGVCGAAIVGLCVFSIYAWYPAIDPVIPAQTDYSPEIIEQGRVLAAAGYCSTCHTPSGGTPYAGNYEMHTDFGT
IYSSNITPDVETGIGNWSEAAFSRAMRIGVSRDGHHLLPAFPYEHFNKMTDADINAIYAYIMTSVPAVNQVKKDNDIPFP
LNIRWFQAGWKLLFADTQPFEVNSEKSAEWNRGAYLAEGVAHCGACHTPRNALGGEKYDQMYQGAAIDGWIAPSLTSTST
SPLPWRSQDFYEYLSTGNSLYHGSAAGPMAPVMHDGLSALPDSDLRDISNYFADLDRTTKMDESQSNKILQAAIDAQHQQ
PDQRIDEGARLYATACQACHYSSDQLVKGRLLITIGSATHLDKPTNLINVILDGVSSDQGISGVVMPGFRDALSDQDISA
IAAYLRQTAGENIWPKLQQQVGEIRNQPRFEQ

Sequences:

>Translated_432_residues
MLKRIVYGVCGAAIVGLCVFSIYAWYPAIDPVIPAQTDYSPEIIEQGRVLAAAGYCSTCHTPSGGTPYAGNYEMHTDFGT
IYSSNITPDVETGIGNWSEAAFSRAMRIGVSRDGHHLLPAFPYEHFNKMTDADINAIYAYIMTSVPAVNQVKKDNDIPFP
LNIRWFQAGWKLLFADTQPFEVNSEKSAEWNRGAYLAEGVAHCGACHTPRNALGGEKYDQMYQGAAIDGWIAPSLTSTST
SPLPWRSQDFYEYLSTGNSLYHGSAAGPMAPVMHDGLSALPDSDLRDISNYFADLDRTTKMDESQSNKILQAAIDAQHQQ
PDQRIDEGARLYATACQACHYSSDQLVKGRLLITIGSATHLDKPTNLINVILDGVSSDQGISGVVMPGFRDALSDQDISA
IAAYLRQTAGENIWPKLQQQVGEIRNQPRFEQ
>Mature_432_residues
MLKRIVYGVCGAAIVGLCVFSIYAWYPAIDPVIPAQTDYSPEIIEQGRVLAAAGYCSTCHTPSGGTPYAGNYEMHTDFGT
IYSSNITPDVETGIGNWSEAAFSRAMRIGVSRDGHHLLPAFPYEHFNKMTDADINAIYAYIMTSVPAVNQVKKDNDIPFP
LNIRWFQAGWKLLFADTQPFEVNSEKSAEWNRGAYLAEGVAHCGACHTPRNALGGEKYDQMYQGAAIDGWIAPSLTSTST
SPLPWRSQDFYEYLSTGNSLYHGSAAGPMAPVMHDGLSALPDSDLRDISNYFADLDRTTKMDESQSNKILQAAIDAQHQQ
PDQRIDEGARLYATACQACHYSSDQLVKGRLLITIGSATHLDKPTNLINVILDGVSSDQGISGVVMPGFRDALSDQDISA
IAAYLRQTAGENIWPKLQQQVGEIRNQPRFEQ

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 47365; Mature: 47365

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRIVYGVCGAAIVGLCVFSIYAWYPAIDPVIPAQTDYSPEIIEQGRVLAAAGYCSTCH
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCC
TPSGGTPYAGNYEMHTDFGTIYSSNITPDVETGIGNWSEAAFSRAMRIGVSRDGHHLLPA
CCCCCCCCCCCEEEECCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
FPYEHFNKMTDADINAIYAYIMTSVPAVNQVKKDNDIPFPLNIRWFQAGWKLLFADTQPF
CCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCC
EVNSEKSAEWNRGAYLAEGVAHCGACHTPRNALGGEKYDQMYQGAAIDGWIAPSLTSTST
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCC
SPLPWRSQDFYEYLSTGNSLYHGSAAGPMAPVMHDGLSALPDSDLRDISNYFADLDRTTK
CCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
MDESQSNKILQAAIDAQHQQPDQRIDEGARLYATACQACHYSSDQLVKGRLLITIGSATH
CCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCEECCEEEEEECCCCC
LDKPTNLINVILDGVSSDQGISGVVMPGFRDALSDQDISAIAAYLRQTAGENIWPKLQQQ
CCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHH
VGEIRNQPRFEQ
HHHHHCCCCCCC
>Mature Secondary Structure
MLKRIVYGVCGAAIVGLCVFSIYAWYPAIDPVIPAQTDYSPEIIEQGRVLAAAGYCSTCH
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCC
TPSGGTPYAGNYEMHTDFGTIYSSNITPDVETGIGNWSEAAFSRAMRIGVSRDGHHLLPA
CCCCCCCCCCCEEEECCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
FPYEHFNKMTDADINAIYAYIMTSVPAVNQVKKDNDIPFPLNIRWFQAGWKLLFADTQPF
CCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCC
EVNSEKSAEWNRGAYLAEGVAHCGACHTPRNALGGEKYDQMYQGAAIDGWIAPSLTSTST
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCC
SPLPWRSQDFYEYLSTGNSLYHGSAAGPMAPVMHDGLSALPDSDLRDISNYFADLDRTTK
CCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
MDESQSNKILQAAIDAQHQQPDQRIDEGARLYATACQACHYSSDQLVKGRLLITIGSATH
CCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCEECCEEEEEECCCCC
LDKPTNLINVILDGVSSDQGISGVVMPGFRDALSDQDISAIAAYLRQTAGENIWPKLQQQ
CCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHH
VGEIRNQPRFEQ
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]