| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is iorA [H]
Identifier: 119945527
GI number: 119945527
Start: 2220025
End: 2220492
Strand: Direct
Name: iorA [H]
Synonym: Ping_1831
Alternate gene names: 119945527
Gene position: 2220025-2220492 (Clockwise)
Preceding gene: 119945526
Following gene: 119945528
Centisome position: 48.69
GC content: 45.09
Gene sequence:
>468_bases ATGGCAAAATTTATTTTAAACGGCGAGCCGATGACTGCCGACGTAGAGAGCGATACTCCTCTACTGTGGGTCATTCGTGA CGAACTCAACATGACGGGTACCAAATTTGGTTGCGGTATTGGAACCTGTGGAGCCTGTACTGTCCATGTGGGCGGACGTG CAACACGTTCATGTATTACTCCCATTTCGATAGTAGAAGGGGCTGAAATTACTACCATTGAAGGTTTGTCAGAAAAAGGC GACCATCCATTACAAATTTCATGGATAAACTTGCAGGTGCCACAATGTGGTTACTGCCAGTCGGGTCAAATTATGCAAGC TGCTGCATTATTAAAAGACATTCCTAAACCGACGGATAAAGATATTGACGCTGTGATGGCTGGGAACTTATGTCGTTGTA TGACTTACGTGCGTATCCGTAGTGCTATTCATGAAGCGGCAAATGCCATTGAAGGAGAGCAATCATGA
Upstream 100 bases:
>100_bases CAAACTGCAGGGGAAAACATCTGGCCTAAATTACAACAACAAGTGGGCGAGATCCGTAATCAACCCCGATTTGAGCAATA ACTTCACTGGAGAAGTGCCA
Downstream 100 bases:
>100_bases GCAGACTTCCTAAACGTGGTTCACAGGGTATAACCCGACGCGGCTTTTTAATTGGTATGACAGCGGTTGGTGTCAGCTTT GGTTTCCCTCGTCACTTGAT
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAKFILNGEPMTADVESDTPLLWVIRDELNMTGTKFGCGIGTCGACTVHVGGRATRSCITPISIVEGAEITTIEGLSEKG DHPLQISWINLQVPQCGYCQSGQIMQAAALLKDIPKPTDKDIDAVMAGNLCRCMTYVRIRSAIHEAANAIEGEQS
Sequences:
>Translated_155_residues MAKFILNGEPMTADVESDTPLLWVIRDELNMTGTKFGCGIGTCGACTVHVGGRATRSCITPISIVEGAEITTIEGLSEKG DHPLQISWINLQVPQCGYCQSGQIMQAAALLKDIPKPTDKDIDAVMAGNLCRCMTYVRIRSAIHEAANAIEGEQS >Mature_154_residues AKFILNGEPMTADVESDTPLLWVIRDELNMTGTKFGCGIGTCGACTVHVGGRATRSCITPISIVEGAEITTIEGLSEKGD HPLQISWINLQVPQCGYCQSGQIMQAAALLKDIPKPTDKDIDAVMAGNLCRCMTYVRIRSAIHEAANAIEGEQS
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=146, Percent_Identity=34.2465753424658, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI71773480, Length=152, Percent_Identity=32.8947368421053, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1786480, Length=162, Percent_Identity=41.9753086419753, Blast_Score=119, Evalue=8e-29, Organism=Escherichia coli, GI1789232, Length=141, Percent_Identity=38.2978723404255, Blast_Score=82, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17540638, Length=156, Percent_Identity=36.5384615384615, Blast_Score=100, Evalue=3e-22, Organism=Caenorhabditis elegans, GI32566215, Length=153, Percent_Identity=33.9869281045752, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17539860, Length=153, Percent_Identity=33.9869281045752, Blast_Score=96, Evalue=5e-21, Organism=Drosophila melanogaster, GI17737937, Length=146, Percent_Identity=34.9315068493151, Blast_Score=95, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647197, Length=161, Percent_Identity=35.4037267080745, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647195, Length=161, Percent_Identity=35.4037267080745, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647199, Length=155, Percent_Identity=34.1935483870968, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24647201, Length=154, Percent_Identity=33.1168831168831, Blast_Score=76, Evalue=8e-15, Organism=Drosophila melanogaster, GI24647193, Length=155, Percent_Identity=34.1935483870968, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 16596; Mature: 16465
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFILNGEPMTADVESDTPLLWVIRDELNMTGTKFGCGIGTCGACTVHVGGRATRSCIT CCEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCC PISIVEGAEITTIEGLSEKGDHPLQISWINLQVPQCGYCQSGQIMQAAALLKDIPKPTDK CHHEECCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC DIDAVMAGNLCRCMTYVRIRSAIHEAANAIEGEQS CHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AKFILNGEPMTADVESDTPLLWVIRDELNMTGTKFGCGIGTCGACTVHVGGRATRSCIT CEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCC PISIVEGAEITTIEGLSEKGDHPLQISWINLQVPQCGYCQSGQIMQAAALLKDIPKPTDK CHHEECCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC DIDAVMAGNLCRCMTYVRIRSAIHEAANAIEGEQS CHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]