| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is kch [C]
Identifier: 119945510
GI number: 119945510
Start: 2200715
End: 2201515
Strand: Direct
Name: kch [C]
Synonym: Ping_1814
Alternate gene names: 119945510
Gene position: 2200715-2201515 (Clockwise)
Preceding gene: 119945508
Following gene: 119945511
Centisome position: 48.27
GC content: 44.82
Gene sequence:
>801_bases ATGACTGATAAGCCCTCTCAGACCGGCTTTGGGCAACAACTTCGTAAGCAAATTGATTTTCTCTATAATGGAGCGAGCAC AAGGGCGCGCAATTTTCGTTGGGGGTTACTCGCCTTTGATGGTATGACTATCCTTTATTTCGTCGTAGGCTCATTTTTTC CGAGTCTGCATAGTCAGTATCTGCTGGAGCAGGGCATTGGTATTATCTATCTGCTCGAATTTTGTGCCCGCCTGTCTATC AGCAAAAAACGACTTCGAGATATCTTTCATCCGGTGGGATTGGCTGATTTGATAGTCATTGCCTCATTGCTGGTTCCCTC GCTGTTGGGTAATTTAAGTTTTCTGCGCGTCTTACGCTCACTGCGATTACTGCGCTCTTACCGCATGCTTAAAAATCTGC GTGGGCAATCAACTTTTGTTCGTTTACATGAAGATATCATTTTCAGCATCGTTAACCTGTTGGTATTTATTTTTGTCATT ACCGCGATCGTCTATGTCAGTCAGGTAGGCGTCAACCCTGACATAAAAAGTTATGTCGATGCCTTGTATTTTACTATCTC GACGTTAACAACAACCGGTTTTGGTGACATCACGCTAATCGGTACCAGCGGGCATCTTCTGGCGGTGCTGATCATGATTT TCGGTATTTCTCTGTTCTTGCGCCTGATTCAAACTATTTTCCGGCCTGAGAAAATACCCTATGAATGTCCTACCTGCGGG CTAAATCGTCACGATATTGATGCTGTCCATTGCAAACATTGCGGGCAGGTGTTACGCATCACCACTGAAGGCAGTAATTA G
Upstream 100 bases:
>100_bases GAGGATAGTGAAGTTCAGCATGATAGAGACTTATATCTATACTGGATGCATCTCCCTTTTCTCGTCCACCGTTAGCTTTT ATTTAAGAATAAGGTAATTT
Downstream 100 bases:
>100_bases TTATTATATTAATCTCTTATCTTCACCTATTATTGCGAACACTCCTTACCATTCATAACCTGTTGGCCTTCAACGAGCCA AGCGGTAATGAGTTTGCCGT
Product: Ion transport 2 domain-containing protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: Ion Transport 2 Domain Protein; Cation Channel Family Protein; Ion Channel Family; Ion Transporter; Ion Channel; Ion Transport Domain Protein C-Terminal; Voltage-Gated K+ Channel Protein; Ion Channel Family Protein; Ionic Voltage-Gated Channel Protein; Voltage-Gated Potassium Channel; Ion Transport 2 Family Protein; Transmembrane Ion Transporter
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQYLLEQGIGIIYLLEFCARLSI SKKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRSLRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVI TAIVYVSQVGVNPDIKSYVDALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCG LNRHDIDAVHCKHCGQVLRITTEGSN
Sequences:
>Translated_266_residues MTDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQYLLEQGIGIIYLLEFCARLSI SKKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRSLRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVI TAIVYVSQVGVNPDIKSYVDALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCG LNRHDIDAVHCKHCGQVLRITTEGSN >Mature_265_residues TDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQYLLEQGIGIIYLLEFCARLSIS KKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRSLRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVIT AIVYVSQVGVNPDIKSYVDALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCGL NRHDIDAVHCKHCGQVLRITTEGSN
Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI26051262, Length=243, Percent_Identity=27.9835390946502, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI26051260, Length=243, Percent_Identity=27.9835390946502, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI26051266, Length=243, Percent_Identity=27.9835390946502, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI26051264, Length=243, Percent_Identity=27.9835390946502, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI236462242, Length=162, Percent_Identity=33.9506172839506, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI236462079, Length=162, Percent_Identity=33.9506172839506, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI236461942, Length=162, Percent_Identity=33.9506172839506, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI28373065, Length=162, Percent_Identity=33.9506172839506, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29997; Mature: 29866
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQY CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLEQGIGIIYLLEFCARLSISKKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRS HHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVITAIVYVSQVGVNPDIKSYVD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCG HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LNRHDIDAVHCKHCGQVLRITTEGSN CCCCCCHHHHHHHCCCEEEEEECCCC >Mature Secondary Structure TDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQY CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLEQGIGIIYLLEFCARLSISKKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRS HHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVITAIVYVSQVGVNPDIKSYVD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCG HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LNRHDIDAVHCKHCGQVLRITTEGSN CCCCCCHHHHHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA