| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945508
Identifier: 119945508
GI number: 119945508
Start: 2198957
End: 2199574
Strand: Direct
Name: 119945508
Synonym: Ping_1812
Alternate gene names: NA
Gene position: 2198957-2199574 (Clockwise)
Preceding gene: 119945507
Following gene: 119945510
Centisome position: 48.23
GC content: 37.7
Gene sequence:
>618_bases ATGATATCAAAAGTTCCTTCTAACCCGAAGCTTCTATTGATACTATCATCGGCCAAATTACCCCAGAGTCTTATTATGCG CTTGTTAAAAACCACCATTCACCCAGATATCGCTTCATTAAATAAAAGTACATTTTTGCGTAATGCCGCCCGGGCAATTG TATTAAAAGGTGATATGATTTTAATGCTTTATACCGCCCGTTACCACGATTACACCCTGCCTGGTGGGGGTGTTGATAAA GAGGAAGGCTTGGTTGAAGGATTAGTACGCGAGCTGCAGGAGGAAACTGGGGCACAAAATATACGTGGAATACAAGCGTT TGGTTTATACGAAGAATTCCGCCCCTGGCATAAAGACGGTTTTGAAATCATGCACATGAAATCATATTGTTATATTTGTG ATATTGATACAAAATTAGGTGTAACAAATTATGAAGATTATGAAATAAGAAACGGCATGAAGCCGGTTTGGTTAAATATT TATGATGCAATAAAACATAACCAACAAACGCTATTAAACAGTGATAAAAAAGGATTATCTGTCGAGCGTGAAACCTTTTT ATTACAATTAATTGCCGCTGAGTTACTGGCAGAAAAACAGCAGGTTAACGCGAATTAA
Upstream 100 bases:
>100_bases AAATCCCCAGCAGGATGTGCAGGCGATTATTACTCAGTATCAAAGCTTACGCACACCTATTGATTCTGCGTATTGACCGT TATTCAGGCAGTACCGTTAA
Downstream 100 bases:
>100_bases CCCGCTGCAAATAAGAAGTAATTAAGATTTTTCGCTGTTGTTTTCAGGGAATTCAGGTAAAGATCTGCCATCGTTATTTG GATAAACGATAAACTCGCCG
Product: nucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Nudix Hydrolase Protein; MutT/NUDIX Protein; Nudix Hydrolase; Phosphohydrolase; NTP Pyrophosphohydrolase; NUDIX Hydrolase Superfamily Protein
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MISKVPSNPKLLLILSSAKLPQSLIMRLLKTTIHPDIASLNKSTFLRNAARAIVLKGDMILMLYTARYHDYTLPGGGVDK EEGLVEGLVRELQEETGAQNIRGIQAFGLYEEFRPWHKDGFEIMHMKSYCYICDIDTKLGVTNYEDYEIRNGMKPVWLNI YDAIKHNQQTLLNSDKKGLSVERETFLLQLIAAELLAEKQQVNAN
Sequences:
>Translated_205_residues MISKVPSNPKLLLILSSAKLPQSLIMRLLKTTIHPDIASLNKSTFLRNAARAIVLKGDMILMLYTARYHDYTLPGGGVDK EEGLVEGLVRELQEETGAQNIRGIQAFGLYEEFRPWHKDGFEIMHMKSYCYICDIDTKLGVTNYEDYEIRNGMKPVWLNI YDAIKHNQQTLLNSDKKGLSVERETFLLQLIAAELLAEKQQVNAN >Mature_205_residues MISKVPSNPKLLLILSSAKLPQSLIMRLLKTTIHPDIASLNKSTFLRNAARAIVLKGDMILMLYTARYHDYTLPGGGVDK EEGLVEGLVRELQEETGAQNIRGIQAFGLYEEFRPWHKDGFEIMHMKSYCYICDIDTKLGVTNYEDYEIRNGMKPVWLNI YDAIKHNQQTLLNSDKKGLSVERETFLLQLIAAELLAEKQQVNAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23328; Mature: 23328
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKVPSNPKLLLILSSAKLPQSLIMRLLKTTIHPDIASLNKSTFLRNAARAIVLKGDMI CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHEEEEECCEE LMLYTARYHDYTLPGGGVDKEEGLVEGLVRELQEETGAQNIRGIQAFGLYEEFRPWHKDG EEEEEHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHCCHHHHCCCCCCC FEIMHMKSYCYICDIDTKLGVTNYEDYEIRNGMKPVWLNIYDAIKHNQQTLLNSDKKGLS EEEEEEECEEEEEECCCCCCCCCCCCHHHHCCCCCEEEHHHHHHHCCHHHHHCCCCCCCC VERETFLLQLIAAELLAEKQQVNAN HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MISKVPSNPKLLLILSSAKLPQSLIMRLLKTTIHPDIASLNKSTFLRNAARAIVLKGDMI CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHEEEEECCEE LMLYTARYHDYTLPGGGVDKEEGLVEGLVRELQEETGAQNIRGIQAFGLYEEFRPWHKDG EEEEEHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHCCHHHHCCCCCCC FEIMHMKSYCYICDIDTKLGVTNYEDYEIRNGMKPVWLNIYDAIKHNQQTLLNSDKKGLS EEEEEEECEEEEEECCCCCCCCCCCCHHHHCCCCCEEEHHHHHHHCCHHHHHCCCCCCCC VERETFLLQLIAAELLAEKQQVNAN HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA