| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945443
Identifier: 119945443
GI number: 119945443
Start: 2118473
End: 2119960
Strand: Direct
Name: 119945443
Synonym: Ping_1740
Alternate gene names: NA
Gene position: 2118473-2119960 (Clockwise)
Preceding gene: 119945441
Following gene: 119945444
Centisome position: 46.46
GC content: 42.27
Gene sequence:
>1488_bases TTGGGAAAATATATACAGCAAACCCAGTTTACAGCGCGGGACTTTGAACAATACCGAAAACGCTTGAATGAAAGCCTAAA GGCATTGAAAATGCTCTTAGCACAACCGGAATTTGGGCGAGGTGCTCCTTCTTTTGGTGCCGAGTTAGAACTTTATATTA TCAATGAGCAAGGTGCCGCAAAACCGAACAATGCAGTACTACTTGGTTTGATGAATGATAAACAGCTAACATGGGAGCTG AACCGTTTTAATCTTGAATATAATTTTATGCCAGTGATGCAGGATAAAGCCCCCTTCACAAAAATAAAGAAACAGATGAC TGATCTGCTTTCCTGCCTGACAGATTCTGCAAAAAACAGGCAGGCCCGAATATTGCCGATCGGTATTTTACCCACCCTGC AAGCTAAGGATCTCGGTCTTAAAGCATTAACAGGGTTACCTCGCTACCATATTCTGGCGAAAACCTTGAGATCTAAACGT GGTTCAGATTTTCATCTGCATATTCACGGTGAAGATGTTTTAGATCTTCATTGGCCGGATATCTCGCCAGAAGGTGCGGC AACCTCTTTTCAGTTCCACTACCGTGTTAATCCTGATGATTTCGCAGCTGCCTATAACGTAGCCCAGCTAACCATTCCTT TAGTGCTTGCTCTCTCGGCTAATTCCCCCTTTTTTTTAGGCCGAAAACTTTGGCAGGAAACGCGCATTGCATTGTTTAAA CAGGCAACGGATTATCGTACTCAATACGCTGTAAATAAGCATTTTCCTGCGCGTGTATTTTATGGTCTTGGATGGGTTCG TAAAGATGTTTACGCGCTGTTTGCGGAAGCTGTTTGCCTGTTTGATCCTATTTTTCCAGTTTGTTCTCAAGAAAATCCCT TTGCACAGCTAAGGGCGGGCGAAGCGCCAGCATTGAGCGAATTAAGATTACACGTGGGCAGTATTTGGAATTGGAATCGT CCTATCTATGATCCATTTGATAATGGCCATTTACGCATTGAGTTACGTGCACTTCCTGCCGGACCTAGCCCCACAAATAT GCTTGCAAGTGCTGCGCTGATAAGTGGTTTGATGCGTGGTTTACAAGAGCATGTAATAAAAATATTGCCAGAGTTTCCTT TTCATTATGCCGAAAAAAATTTTTATCGCGCAGCAAAATACGGTTTAAACGCTTGTTTATTTTGGCCAAATTTGAGAACT GGAAAGCTGCAGCAACGCCCGGTAATCAGCATACTCAAGGATCTTCTTCCTTTTGCACAAGATGGCCTATCTCAATTGGG AATAGAGGAAACTGAGATAAGACAGCAAATGGAGATTATTCACGCCGGAATGGAAAGTCGAATGAATGGGGCACAATGGC AAATTAATGTGTTCGATAAACTAATCCAAAGCGAAGATAGACAAACAGCCTTAGCACAATTAGTTGAGCTTTATTATAAA CAATACCAAACGGGTAAAGCAGTCCATGAATGGAGTCAAAAAATTTGA
Upstream 100 bases:
>100_bases ATGACATGCATCCAATCTGAAAAAGACTATTATTAATGTAAGGTCAGCATAGTATCCACAACTATTGCATTCTCACCTAT GGCATCCTGAGGATTCTCAT
Downstream 100 bases:
>100_bases GTAACTTATTATCGCAGACTTTATATTTAAATTATTTGGAGAACCCGAACCCGGATGATTTTGGCGTATCGGTTGAGAGT TTTTTACATTATTTGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MGKYIQQTQFTARDFEQYRKRLNESLKALKMLLAQPEFGRGAPSFGAELELYIINEQGAAKPNNAVLLGLMNDKQLTWEL NRFNLEYNFMPVMQDKAPFTKIKKQMTDLLSCLTDSAKNRQARILPIGILPTLQAKDLGLKALTGLPRYHILAKTLRSKR GSDFHLHIHGEDVLDLHWPDISPEGAATSFQFHYRVNPDDFAAAYNVAQLTIPLVLALSANSPFFLGRKLWQETRIALFK QATDYRTQYAVNKHFPARVFYGLGWVRKDVYALFAEAVCLFDPIFPVCSQENPFAQLRAGEAPALSELRLHVGSIWNWNR PIYDPFDNGHLRIELRALPAGPSPTNMLASAALISGLMRGLQEHVIKILPEFPFHYAEKNFYRAAKYGLNACLFWPNLRT GKLQQRPVISILKDLLPFAQDGLSQLGIEETEIRQQMEIIHAGMESRMNGAQWQINVFDKLIQSEDRQTALAQLVELYYK QYQTGKAVHEWSQKI
Sequences:
>Translated_495_residues MGKYIQQTQFTARDFEQYRKRLNESLKALKMLLAQPEFGRGAPSFGAELELYIINEQGAAKPNNAVLLGLMNDKQLTWEL NRFNLEYNFMPVMQDKAPFTKIKKQMTDLLSCLTDSAKNRQARILPIGILPTLQAKDLGLKALTGLPRYHILAKTLRSKR GSDFHLHIHGEDVLDLHWPDISPEGAATSFQFHYRVNPDDFAAAYNVAQLTIPLVLALSANSPFFLGRKLWQETRIALFK QATDYRTQYAVNKHFPARVFYGLGWVRKDVYALFAEAVCLFDPIFPVCSQENPFAQLRAGEAPALSELRLHVGSIWNWNR PIYDPFDNGHLRIELRALPAGPSPTNMLASAALISGLMRGLQEHVIKILPEFPFHYAEKNFYRAAKYGLNACLFWPNLRT GKLQQRPVISILKDLLPFAQDGLSQLGIEETEIRQQMEIIHAGMESRMNGAQWQINVFDKLIQSEDRQTALAQLVELYYK QYQTGKAVHEWSQKI >Mature_494_residues GKYIQQTQFTARDFEQYRKRLNESLKALKMLLAQPEFGRGAPSFGAELELYIINEQGAAKPNNAVLLGLMNDKQLTWELN RFNLEYNFMPVMQDKAPFTKIKKQMTDLLSCLTDSAKNRQARILPIGILPTLQAKDLGLKALTGLPRYHILAKTLRSKRG SDFHLHIHGEDVLDLHWPDISPEGAATSFQFHYRVNPDDFAAAYNVAQLTIPLVLALSANSPFFLGRKLWQETRIALFKQ ATDYRTQYAVNKHFPARVFYGLGWVRKDVYALFAEAVCLFDPIFPVCSQENPFAQLRAGEAPALSELRLHVGSIWNWNRP IYDPFDNGHLRIELRALPAGPSPTNMLASAALISGLMRGLQEHVIKILPEFPFHYAEKNFYRAAKYGLNACLFWPNLRTG KLQQRPVISILKDLLPFAQDGLSQLGIEETEIRQQMEIIHAGMESRMNGAQWQINVFDKLIQSEDRQTALAQLVELYYKQ YQTGKAVHEWSQKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56522; Mature: 56391
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKYIQQTQFTARDFEQYRKRLNESLKALKMLLAQPEFGRGAPSFGAELELYIINEQGAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCC KPNNAVLLGLMNDKQLTWELNRFNLEYNFMPVMQDKAPFTKIKKQMTDLLSCLTDSAKNR CCCCEEEEEEECCCEEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC QARILPIGILPTLQAKDLGLKALTGLPRYHILAKTLRSKRGSDFHLHIHGEDVLDLHWPD CEEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCC ISPEGAATSFQFHYRVNPDDFAAAYNVAQLTIPLVLALSANSPFFLGRKLWQETRIALFK CCCCCCCCEEEEEEEECCHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH QATDYRTQYAVNKHFPARVFYGLGWVRKDVYALFAEAVCLFDPIFPVCSQENPFAQLRAG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCC EAPALSELRLHVGSIWNWNRPIYDPFDNGHLRIELRALPAGPSPTNMLASAALISGLMRG CCCCHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH LQEHVIKILPEFPFHYAEKNFYRAAKYGLNACLFWPNLRTGKLQQRPVISILKDLLPFAQ HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH DGLSQLGIEETEIRQQMEIIHAGMESRMNGAQWQINVFDKLIQSEDRQTALAQLVELYYK HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHH QYQTGKAVHEWSQKI HHHCCHHHHHHHHCC >Mature Secondary Structure GKYIQQTQFTARDFEQYRKRLNESLKALKMLLAQPEFGRGAPSFGAELELYIINEQGAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCC KPNNAVLLGLMNDKQLTWELNRFNLEYNFMPVMQDKAPFTKIKKQMTDLLSCLTDSAKNR CCCCEEEEEEECCCEEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC QARILPIGILPTLQAKDLGLKALTGLPRYHILAKTLRSKRGSDFHLHIHGEDVLDLHWPD CEEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCC ISPEGAATSFQFHYRVNPDDFAAAYNVAQLTIPLVLALSANSPFFLGRKLWQETRIALFK CCCCCCCCEEEEEEEECCHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH QATDYRTQYAVNKHFPARVFYGLGWVRKDVYALFAEAVCLFDPIFPVCSQENPFAQLRAG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCC EAPALSELRLHVGSIWNWNRPIYDPFDNGHLRIELRALPAGPSPTNMLASAALISGLMRG CCCCHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH LQEHVIKILPEFPFHYAEKNFYRAAKYGLNACLFWPNLRTGKLQQRPVISILKDLLPFAQ HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH DGLSQLGIEETEIRQQMEIIHAGMESRMNGAQWQINVFDKLIQSEDRQTALAQLVELYYK HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHH QYQTGKAVHEWSQKI HHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA