| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945356
Identifier: 119945356
GI number: 119945356
Start: 2001581
End: 2001874
Strand: Direct
Name: 119945356
Synonym: Ping_1644
Alternate gene names: NA
Gene position: 2001581-2001874 (Clockwise)
Preceding gene: 119945355
Following gene: 119945360
Centisome position: 43.9
GC content: 36.73
Gene sequence:
>294_bases ATGTCTAGACTATTCAAACTAGGTTGGAAACGATTCGTAAAAGCTTTTCAATCTTCTCAAGAGTTCCAACAGCGAATTTG GGTCGTTAGTATACAAAAAGGCGATCAGCAGAAAAAGAGTGTTTTTAATGATACCTGTTTGGTAAACGAAGATTGTTTCG ATACGCCTATGCAGTGGATGAGTGACAAAGGCTATTTAGCAGAAAGTATTAAAAAAGTAGATAAGATGCAATGTTCACAG GTACTCACCATAGAGTTTGACAATTATCGGCATAGTTTGATGCGTGTTAAGTAG
Upstream 100 bases:
>100_bases CGCCCTATATAACATCTATAATTTTGGATCTTGACGGTAAAGTATGTGATGATACTGATCAAAATTTGTTAATCTGCCAG TAGGAATATTTATAAAAACT
Downstream 100 bases:
>100_bases TCTGTTGATAGGCCTGCAGAAATCTTGTGCAGACCTGAATTGATGTGCAGTTAAAGCTCACAGGGCTGCTTCTAAAATTT TACGCGACCTGCTTAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSRLFKLGWKRFVKAFQSSQEFQQRIWVVSIQKGDQQKKSVFNDTCLVNEDCFDTPMQWMSDKGYLAESIKKVDKMQCSQ VLTIEFDNYRHSLMRVK
Sequences:
>Translated_97_residues MSRLFKLGWKRFVKAFQSSQEFQQRIWVVSIQKGDQQKKSVFNDTCLVNEDCFDTPMQWMSDKGYLAESIKKVDKMQCSQ VLTIEFDNYRHSLMRVK >Mature_96_residues SRLFKLGWKRFVKAFQSSQEFQQRIWVVSIQKGDQQKKSVFNDTCLVNEDCFDTPMQWMSDKGYLAESIKKVDKMQCSQV LTIEFDNYRHSLMRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11595; Mature: 11463
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLFKLGWKRFVKAFQSSQEFQQRIWVVSIQKGDQQKKSVFNDTCLVNEDCFDTPMQWM CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHH SDKGYLAESIKKVDKMQCSQVLTIEFDNYRHSLMRVK CCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCC >Mature Secondary Structure SRLFKLGWKRFVKAFQSSQEFQQRIWVVSIQKGDQQKKSVFNDTCLVNEDCFDTPMQWM CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHH SDKGYLAESIKKVDKMQCSQVLTIEFDNYRHSLMRVK CCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA