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The map label for this gene is ybbK [C]

Identifier: 119945355

GI number: 119945355

Start: 2000451

End: 2001221

Strand: Direct

Name: ybbK [C]

Synonym: Ping_1643

Alternate gene names: 119945355

Gene position: 2000451-2001221 (Clockwise)

Preceding gene: 119945354

Following gene: 119945356

Centisome position: 43.87

GC content: 38.0

Gene sequence:

>771_bases
ATGATGATTTATAGTATAACCGGCGGTCTGATTTCTATTTTAGTACTGGCATTACTCTTTAGTATGTTCAAAGTATTACG
TGAATATGAGCGTGGTGTGGTTTATTTTCTTGGGCGTTTCCAGGAAGTAAAAGGCCCTGGATTAGTTATTTTAATTCCTG
TTATTCAGCAAATGGTAAGAGTTGATCTGCGGACAATTGTTTTAGATGTACCCACTCAAGATTTAATTACACGTGATAAC
GTTTCGGTTAAAGTTAATGCGGTTGTCTATTTTCGAGTTGTTGATCCGCAGATGGCGATTAACAATGTCGAAAGTTATTT
GGAGGCAACCAGTCAATTATCACAAACGACCCTAAGGTCAGTGTTAGGGCAACATGAACTTGATGAGTTACTGGCCGAAC
GGGACCGTTTGAATAAAGATATACAAGTTATTTTGGATAAACAAACGGACAATTGGGGTATAAAAATAGCAACTGTTGAA
GTTAAACATGTGGATCTTGATGACAGTATGATTCGTGCTTTAGCCAAACAAGCAGAGGCCGAGCGTGTCAGACGGGCAAA
AGTTATTCATGCAACGGGTGAATTTGAAGCATCTGAAAAATTACAGCAGGCTGCAATGGTTTTAAGTAAAGCGCCTAATG
CGATGCAGTTAAGATATATGCAGACGTTAACTGAAATTGCTAATGAGAAAACCTCCACGATTATCTTTCCGATGCCGATT
GATTTGTTGGATAATTTAAAAGCGTTAGTTAAAGAAAAAGATACCAATTAG

Upstream 100 bases:

>100_bases
AAGTCTCCGGATTAAATCTGATTGTCTGTGCTAATGAGAAAAACAGCCTCATGGAATAAAAACAGCATAAAACGTGTGTT
CATTAATAAGGAGAAAGGTA

Downstream 100 bases:

>100_bases
TCTATTAAGGGGCAAGCTATTTAAACGGAGTCTTTAATATTGAAATAGATTGTAGGGTACTATGACACGATTTTTTTATG
TTTTATTGTCCTTGGTCTCA

Product: band 7 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MMIYSITGGLISILVLALLFSMFKVLREYERGVVYFLGRFQEVKGPGLVILIPVIQQMVRVDLRTIVLDVPTQDLITRDN
VSVKVNAVVYFRVVDPQMAINNVESYLEATSQLSQTTLRSVLGQHELDELLAERDRLNKDIQVILDKQTDNWGIKIATVE
VKHVDLDDSMIRALAKQAEAERVRRAKVIHATGEFEASEKLQQAAMVLSKAPNAMQLRYMQTLTEIANEKTSTIIFPMPI
DLLDNLKALVKEKDTN

Sequences:

>Translated_256_residues
MMIYSITGGLISILVLALLFSMFKVLREYERGVVYFLGRFQEVKGPGLVILIPVIQQMVRVDLRTIVLDVPTQDLITRDN
VSVKVNAVVYFRVVDPQMAINNVESYLEATSQLSQTTLRSVLGQHELDELLAERDRLNKDIQVILDKQTDNWGIKIATVE
VKHVDLDDSMIRALAKQAEAERVRRAKVIHATGEFEASEKLQQAAMVLSKAPNAMQLRYMQTLTEIANEKTSTIIFPMPI
DLLDNLKALVKEKDTN
>Mature_256_residues
MMIYSITGGLISILVLALLFSMFKVLREYERGVVYFLGRFQEVKGPGLVILIPVIQQMVRVDLRTIVLDVPTQDLITRDN
VSVKVNAVVYFRVVDPQMAINNVESYLEATSQLSQTTLRSVLGQHELDELLAERDRLNKDIQVILDKQTDNWGIKIATVE
VKHVDLDDSMIRALAKQAEAERVRRAKVIHATGEFEASEKLQQAAMVLSKAPNAMQLRYMQTLTEIANEKTSTIIFPMPI
DLLDNLKALVKEKDTN

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI221316744, Length=250, Percent_Identity=43.2, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI21686995, Length=250, Percent_Identity=43.2, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI38016911, Length=230, Percent_Identity=45.6521739130435, Blast_Score=203, Evalue=1e-52,
Organism=Homo sapiens, GI7657615, Length=246, Percent_Identity=36.5853658536585, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI7305503, Length=195, Percent_Identity=37.4358974358974, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI20149563, Length=161, Percent_Identity=32.9192546583851, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI38016907, Length=60, Percent_Identity=58.3333333333333, Blast_Score=78, Evalue=8e-15,
Organism=Escherichia coli, GI1786697, Length=188, Percent_Identity=32.4468085106383, Blast_Score=115, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17569493, Length=230, Percent_Identity=45.6521739130435, Blast_Score=213, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI193209764, Length=247, Percent_Identity=43.7246963562753, Blast_Score=212, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI25153583, Length=250, Percent_Identity=44.4, Blast_Score=199, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI71987621, Length=251, Percent_Identity=44.2231075697211, Blast_Score=199, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI71987612, Length=250, Percent_Identity=44.4, Blast_Score=199, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17569499, Length=250, Percent_Identity=42.8, Blast_Score=194, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17569497, Length=237, Percent_Identity=40.9282700421941, Blast_Score=189, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI193210507, Length=236, Percent_Identity=43.2203389830509, Blast_Score=187, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17570161, Length=236, Percent_Identity=43.2203389830509, Blast_Score=187, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17570459, Length=253, Percent_Identity=41.1067193675889, Blast_Score=186, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI71989948, Length=227, Percent_Identity=44.4933920704846, Blast_Score=181, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI32566490, Length=223, Percent_Identity=44.8430493273543, Blast_Score=179, Evalue=9e-46,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=45.1086956521739, Blast_Score=144, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI71989963, Length=120, Percent_Identity=47.5, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI32564147, Length=190, Percent_Identity=34.7368421052632, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17542664, Length=153, Percent_Identity=28.1045751633987, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45556022, Length=250, Percent_Identity=44.8, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24657857, Length=249, Percent_Identity=47.7911646586345, Blast_Score=205, Evalue=3e-53,
Organism=Drosophila melanogaster, GI62484448, Length=249, Percent_Identity=47.7911646586345, Blast_Score=204, Evalue=3e-53,
Organism=Drosophila melanogaster, GI281365664, Length=249, Percent_Identity=47.7911646586345, Blast_Score=204, Evalue=4e-53,
Organism=Drosophila melanogaster, GI62484274, Length=249, Percent_Identity=47.7911646586345, Blast_Score=204, Evalue=5e-53,
Organism=Drosophila melanogaster, GI18860517, Length=240, Percent_Identity=45.8333333333333, Blast_Score=202, Evalue=2e-52,
Organism=Drosophila melanogaster, GI28573263, Length=239, Percent_Identity=41.0041841004184, Blast_Score=187, Evalue=6e-48,
Organism=Drosophila melanogaster, GI21356845, Length=235, Percent_Identity=40.8510638297872, Blast_Score=178, Evalue=3e-45,
Organism=Drosophila melanogaster, GI281361631, Length=236, Percent_Identity=38.9830508474576, Blast_Score=171, Evalue=4e-43,
Organism=Drosophila melanogaster, GI281361633, Length=236, Percent_Identity=38.9830508474576, Blast_Score=171, Evalue=4e-43,
Organism=Drosophila melanogaster, GI281361635, Length=182, Percent_Identity=39.5604395604396, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI45550506, Length=169, Percent_Identity=39.0532544378698, Blast_Score=120, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 28954; Mature: 28954

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIYSITGGLISILVLALLFSMFKVLREYERGVVYFLGRFQEVKGPGLVILIPVIQQMVR
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHHHHHHH
VDLRTIVLDVPTQDLITRDNVSVKVNAVVYFRVVDPQMAINNVESYLEATSQLSQTTLRS
HHHHHHEEECCCHHHHCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
VLGQHELDELLAERDRLNKDIQVILDKQTDNWGIKIATVEVKHVDLDDSMIRALAKQAEA
HHCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHH
ERVRRAKVIHATGEFEASEKLQQAAMVLSKAPNAMQLRYMQTLTEIANEKTSTIIFPMPI
HHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCH
DLLDNLKALVKEKDTN
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMIYSITGGLISILVLALLFSMFKVLREYERGVVYFLGRFQEVKGPGLVILIPVIQQMVR
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHHHHHHH
VDLRTIVLDVPTQDLITRDNVSVKVNAVVYFRVVDPQMAINNVESYLEATSQLSQTTLRS
HHHHHHEEECCCHHHHCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
VLGQHELDELLAERDRLNKDIQVILDKQTDNWGIKIATVEVKHVDLDDSMIRALAKQAEA
HHCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHH
ERVRRAKVIHATGEFEASEKLQQAAMVLSKAPNAMQLRYMQTLTEIANEKTSTIIFPMPI
HHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCH
DLLDNLKALVKEKDTN
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]