| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945301
Identifier: 119945301
GI number: 119945301
Start: 1937433
End: 1938050
Strand: Direct
Name: 119945301
Synonym: Ping_1584
Alternate gene names: NA
Gene position: 1937433-1938050 (Clockwise)
Preceding gene: 119945299
Following gene: 119945303
Centisome position: 42.49
GC content: 43.04
Gene sequence:
>618_bases ATGAAAGTTTTCACTAGTGTTCTTTGTTTGTTTGGTTTAATTACAGTGCTTACTGGTTGTGCCACGCCCGGCCCCCTCGT GAATAGCAGCATCACACCCGAAGTAAGAAATGCTATTGCTTATTGTAGTGCGGGCATAGCGTCGGAAACAGGTCTGAAAA TTGAAGCGGCCATTGTTGAAAATGGAGGGAAGATTGATACTGTTCTACATGACAAAATTACAGGTGTTTTTGCAAGTATA CCTGGTGTTACGGAAGCTAACGCTGTTGCTTCGCAAAAGCTGTACATGGATTGCCTCGACAAAAAAACATCACAAGAGAA AACATCTTCAATTGAAGCTTGCCATGCAAAATTGGCATGTGAAATAGACACCATGCAACAGTTCTGCAATTGCAGAACCA TTATTACCGAAATGACCATTGAAAAGGGGTATTCTGATTCGTTTGGGGACAAGATGCTAAAAGAGCGGTGTTACTCTGGA CAGTACGATCTAAGGGAATGTTGGAATGGCGAAGATGTAAATATGGCGCGTGCATCCTGCACAGTTTTATTGCAAAGTAA TGGGCGTGAGCTGCCAAAGGCAATGACGGGAACATGCCTGACCAAGCAAAAAGACTAA
Upstream 100 bases:
>100_bases TCTTTAACAATAAAAAAAATTAAACGTGTGTTATTAAGAATGCAGACTAATACACTGTTAGCCCACCCCGGTAGCCCTCA AATATTTAAAAGGAGTTGTT
Downstream 100 bases:
>100_bases CCCGACATTCAACCCGGACTCCGCAAAAGCGCGTAACCAATTAATTTTACGTTATAAATCAATTGAAACTAATATACATA TGAATATTTTTCAAATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKVFTSVLCLFGLITVLTGCATPGPLVNSSITPEVRNAIAYCSAGIASETGLKIEAAIVENGGKIDTVLHDKITGVFASI PGVTEANAVASQKLYMDCLDKKTSQEKTSSIEACHAKLACEIDTMQQFCNCRTIITEMTIEKGYSDSFGDKMLKERCYSG QYDLRECWNGEDVNMARASCTVLLQSNGRELPKAMTGTCLTKQKD
Sequences:
>Translated_205_residues MKVFTSVLCLFGLITVLTGCATPGPLVNSSITPEVRNAIAYCSAGIASETGLKIEAAIVENGGKIDTVLHDKITGVFASI PGVTEANAVASQKLYMDCLDKKTSQEKTSSIEACHAKLACEIDTMQQFCNCRTIITEMTIEKGYSDSFGDKMLKERCYSG QYDLRECWNGEDVNMARASCTVLLQSNGRELPKAMTGTCLTKQKD >Mature_205_residues MKVFTSVLCLFGLITVLTGCATPGPLVNSSITPEVRNAIAYCSAGIASETGLKIEAAIVENGGKIDTVLHDKITGVFASI PGVTEANAVASQKLYMDCLDKKTSQEKTSSIEACHAKLACEIDTMQQFCNCRTIITEMTIEKGYSDSFGDKMLKERCYSG QYDLRECWNGEDVNMARASCTVLLQSNGRELPKAMTGTCLTKQKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22176; Mature: 22176
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFTSVLCLFGLITVLTGCATPGPLVNSSITPEVRNAIAYCSAGIASETGLKIEAAIVE CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC NGGKIDTVLHDKITGVFASIPGVTEANAVASQKLYMDCLDKKTSQEKTSSIEACHAKLAC CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC EIDTMQQFCNCRTIITEMTIEKGYSDSFGDKMLKERCYSGQYDLRECWNGEDVNMARASC CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHE TVLLQSNGRELPKAMTGTCLTKQKD EEEECCCCCCCHHHHHCCHHCCCCC >Mature Secondary Structure MKVFTSVLCLFGLITVLTGCATPGPLVNSSITPEVRNAIAYCSAGIASETGLKIEAAIVE CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC NGGKIDTVLHDKITGVFASIPGVTEANAVASQKLYMDCLDKKTSQEKTSSIEACHAKLAC CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC EIDTMQQFCNCRTIITEMTIEKGYSDSFGDKMLKERCYSGQYDLRECWNGEDVNMARASC CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHE TVLLQSNGRELPKAMTGTCLTKQKD EEEECCCCCCCHHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA