| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945299
Identifier: 119945299
GI number: 119945299
Start: 1933607
End: 1934113
Strand: Direct
Name: 119945299
Synonym: Ping_1581
Alternate gene names: NA
Gene position: 1933607-1934113 (Clockwise)
Preceding gene: 119945298
Following gene: 119945301
Centisome position: 42.41
GC content: 38.46
Gene sequence:
>507_bases GTGAGGTTCAGGTTTTTAATTTTGACTGTCAATGAATTTGAGCTAGTTTTTCTCTTGCCAGAGCAAGATATTGCATTTAA CGAGTTCCATGATGCGCGTTATCCGCTTCGTTTGCGCTTGCATAAATGTAGAAGTAAGGGCAGCTGGTATTTAGTTCGAT CTAGTCATGGAAAGTCAAAACATGAAAAAATAGGCAGTTATCCGCACATTAAACTAAAAGATATTTTATCTAATTTAAGA CACAATTTAATTGCGGATACTGCTGAGCCAGAAAGTGAATTTCAGACAGTGGGGCAGCTTTTAAAATGGTATTTGGCGCG CACTGAACAGAACAGCCAAATCACTTCACAGCGTAAAACGACTATACGTTGGGCGATCACCCGGCATTTATTGCCCCTTA TTGACGAATTACCTCTAAATCAGACAAAGTTGTTGGCCCACATTTCATCATCAAACTTATTGCACGTAATGAAAATATTA TGGGTAGTAATCATCCTTGCAAAGTAA
Upstream 100 bases:
>100_bases CTAAATAAAATCATCTGAATGAGCCGCGACTGCTATTGTTCTGCACTGTGAAATGTTAACCCTGCAGTGTTCTAACGTAT GATTTTTCCTTGGATTAGCA
Downstream 100 bases:
>100_bases AAATAGCAAGTGTACTTGGTACTACACCAAACAGACGCGCATTATCCCTACGCACTCACTATGAAAATGTGAATGCAGTT CTTGGTAATTACTACTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRFRFLILTVNEFELVFLLPEQDIAFNEFHDARYPLRLRLHKCRSKGSWYLVRSSHGKSKHEKIGSYPHIKLKDILSNLR HNLIADTAEPESEFQTVGQLLKWYLARTEQNSQITSQRKTTIRWAITRHLLPLIDELPLNQTKLLAHISSSNLLHVMKIL WVVIILAK
Sequences:
>Translated_168_residues MRFRFLILTVNEFELVFLLPEQDIAFNEFHDARYPLRLRLHKCRSKGSWYLVRSSHGKSKHEKIGSYPHIKLKDILSNLR HNLIADTAEPESEFQTVGQLLKWYLARTEQNSQITSQRKTTIRWAITRHLLPLIDELPLNQTKLLAHISSSNLLHVMKIL WVVIILAK >Mature_168_residues MRFRFLILTVNEFELVFLLPEQDIAFNEFHDARYPLRLRLHKCRSKGSWYLVRSSHGKSKHEKIGSYPHIKLKDILSNLR HNLIADTAEPESEFQTVGQLLKWYLARTEQNSQITSQRKTTIRWAITRHLLPLIDELPLNQTKLLAHISSSNLLHVMKIL WVVIILAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19775; Mature: 19775
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFRFLILTVNEFELVFLLPEQDIAFNEFHDARYPLRLRLHKCRSKGSWYLVRSSHGKSK CCEEEEEEEECCEEEEEEECCCCCCCHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCH HEKIGSYPHIKLKDILSNLRHNLIADTAEPESEFQTVGQLLKWYLARTEQNSQITSQRKT HHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH TIRWAITRHLLPLIDELPLNQTKLLAHISSSNLLHVMKILWVVIILAK HHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRFRFLILTVNEFELVFLLPEQDIAFNEFHDARYPLRLRLHKCRSKGSWYLVRSSHGKSK CCEEEEEEEECCEEEEEEECCCCCCCHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCH HEKIGSYPHIKLKDILSNLRHNLIADTAEPESEFQTVGQLLKWYLARTEQNSQITSQRKT HHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH TIRWAITRHLLPLIDELPLNQTKLLAHISSSNLLHVMKILWVVIILAK HHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA