| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945298
Identifier: 119945298
GI number: 119945298
Start: 1932309
End: 1933436
Strand: Direct
Name: 119945298
Synonym: Ping_1580
Alternate gene names: NA
Gene position: 1932309-1933436 (Clockwise)
Preceding gene: 119945297
Following gene: 119945299
Centisome position: 42.38
GC content: 41.31
Gene sequence:
>1128_bases TTGAAAAAAGTTAATAAATACAATGGTATTTCATCTAAAAAAATATTGGTTATATTATTCATTGTCTTTTTTTTATTCTT ATTGAGTATTGCTCTTTTAAGCAAAGAACCCCCGAAGGGGAACCCTCTGATGGTGCTAGCAGAGGATTATACGCAATATG AATTACCGTCAGAAAATCAAAAGATCATCTTTCCACAAGCACATTGGCCGCATAGGGGATTTCGCCATGAATGGTGGTAT TTAACGGCCAATTTAAGCACTGAAAGCGGTCAGCGTTTTGCCACTCAGTGGACACTATTTCGTACTGCTATTAATGATCA GCATTGGTATTTTGCCCATGCAGCTTTAGCTGATACAACCGTTCATTTGGCCGAATTTCGTGACGGACGAGAAGAGTTAG GCAATGTTGAATTAATAAACTTTCCGTTTACTGCGCTAATAGACGATTGGAGCTGGCGCTCTTCTGCGCAGCTATTACCT GCGCAGTTAACTTATGGCAGTGCGAAGTATGGTTTAGCTGGTGGTATGGCTGACGATCCTGATTTTCCGCTAACAAACTG GCAAGTTAACCTCTTTTTAGCTGATGCCAACCCTTTTTATCTGCAGGGGGTGAACGGTTTTAGTAAAAAACATCCCAGTA AAGATATCGCCAGTTATTACTATTCACAGCCATTTATTAGTGTCAAAGGTGATATTTTATGGCAGGGGGAACGTTCGAGT GTCACTGGAACGGCTTGGTTTGACCGCGAGTGGGGATCAAAAATGCTAGCTCCGGAACAAAAAGGTTGGGACTGGTTTTC ATTGCGTTTAACTAAAGACAGGGCATTGATGATTTACCGTATCCGTTCAGAGAAAAATGATTTTCTGTACGGAAGTGTAA TGGATAGCAGCGGTGACATAAAAATATTAGCGACTAAGGATATCAGGCTAAAAAGTCAGGCAATGGTTCAAGGGAATTAC CCGCAGGCTTTTACTCTGGAGGTTCAACCACTTGGTATCAACTTAATGATTAAGATCGTCAACGACCAGCAAGTGATGCG CTTTGGCATTGAATATTTCGAAGGTATGGTCACTTTTAGCGGCTCACACAAGGGGGAAGGATTTGTTGAAATGACCGGTT ATCATTAA
Upstream 100 bases:
>100_bases TTGCCCCCTTTGTTGTCAGCAGTTTGCTCGGTTTACTCTTATTAATTCCGGCGGTAAGTATTCCCCTGCTTAAACTGAAT GTCAGGAAAAATTTATGTCC
Downstream 100 bases:
>100_bases TAAGCCATTATTTTAAGTGCGTTGTTTATCTGTTTTCACTGTGTTGAATCGTTCATTCGTTTTTTAAACCCTAAATAAAA TCATCTGAATGAGCCGCGAC
Product: putative secreted hydrolase
Products: NA
Alternate protein names: Secreted Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydrolase; Attachment Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKKVNKYNGISSKKILVILFIVFFLFLLSIALLSKEPPKGNPLMVLAEDYTQYELPSENQKIIFPQAHWPHRGFRHEWWY LTANLSTESGQRFATQWTLFRTAINDQHWYFAHAALADTTVHLAEFRDGREELGNVELINFPFTALIDDWSWRSSAQLLP AQLTYGSAKYGLAGGMADDPDFPLTNWQVNLFLADANPFYLQGVNGFSKKHPSKDIASYYYSQPFISVKGDILWQGERSS VTGTAWFDREWGSKMLAPEQKGWDWFSLRLTKDRALMIYRIRSEKNDFLYGSVMDSSGDIKILATKDIRLKSQAMVQGNY PQAFTLEVQPLGINLMIKIVNDQQVMRFGIEYFEGMVTFSGSHKGEGFVEMTGYH
Sequences:
>Translated_375_residues MKKVNKYNGISSKKILVILFIVFFLFLLSIALLSKEPPKGNPLMVLAEDYTQYELPSENQKIIFPQAHWPHRGFRHEWWY LTANLSTESGQRFATQWTLFRTAINDQHWYFAHAALADTTVHLAEFRDGREELGNVELINFPFTALIDDWSWRSSAQLLP AQLTYGSAKYGLAGGMADDPDFPLTNWQVNLFLADANPFYLQGVNGFSKKHPSKDIASYYYSQPFISVKGDILWQGERSS VTGTAWFDREWGSKMLAPEQKGWDWFSLRLTKDRALMIYRIRSEKNDFLYGSVMDSSGDIKILATKDIRLKSQAMVQGNY PQAFTLEVQPLGINLMIKIVNDQQVMRFGIEYFEGMVTFSGSHKGEGFVEMTGYH >Mature_375_residues MKKVNKYNGISSKKILVILFIVFFLFLLSIALLSKEPPKGNPLMVLAEDYTQYELPSENQKIIFPQAHWPHRGFRHEWWY LTANLSTESGQRFATQWTLFRTAINDQHWYFAHAALADTTVHLAEFRDGREELGNVELINFPFTALIDDWSWRSSAQLLP AQLTYGSAKYGLAGGMADDPDFPLTNWQVNLFLADANPFYLQGVNGFSKKHPSKDIASYYYSQPFISVKGDILWQGERSS VTGTAWFDREWGSKMLAPEQKGWDWFSLRLTKDRALMIYRIRSEKNDFLYGSVMDSSGDIKILATKDIRLKSQAMVQGNY PQAFTLEVQPLGINLMIKIVNDQQVMRFGIEYFEGMVTFSGSHKGEGFVEMTGYH
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43060; Mature: 43060
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVNKYNGISSKKILVILFIVFFLFLLSIALLSKEPPKGNPLMVLAEDYTQYELPSENQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCC KIIFPQAHWPHRGFRHEWWYLTANLSTESGQRFATQWTLFRTAINDQHWYFAHAALADTT EEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEHHHEEEEEEHHCCCCEEEEEEEHHHCE VHLAEFRDGREELGNVELINFPFTALIDDWSWRSSAQLLPAQLTYGSAKYGLAGGMADDP EEEHHHCCCHHHHCCEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC DFPLTNWQVNLFLADANPFYLQGVNGFSKKHPSKDIASYYYSQPFISVKGDILWQGERSS CCCCCCEEEEEEEECCCCEEEECCCCCHHCCCCHHHHHHHHCCCEEEECCCEEECCCCCC VTGTAWFDREWGSKMLAPEQKGWDWFSLRLTKDRALMIYRIRSEKNDFLYGSVMDSSGDI EEEEEEECHHCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCE KILATKDIRLKSQAMVQGNYPQAFTLEVQPLGINLMIKIVNDQQVMRFGIEYFEGMVTFS EEEEECCCEEECEEEEECCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHCCEEEEC GSHKGEGFVEMTGYH CCCCCCEEEEECCCC >Mature Secondary Structure MKKVNKYNGISSKKILVILFIVFFLFLLSIALLSKEPPKGNPLMVLAEDYTQYELPSENQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCC KIIFPQAHWPHRGFRHEWWYLTANLSTESGQRFATQWTLFRTAINDQHWYFAHAALADTT EEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEHHHEEEEEEHHCCCCEEEEEEEHHHCE VHLAEFRDGREELGNVELINFPFTALIDDWSWRSSAQLLPAQLTYGSAKYGLAGGMADDP EEEHHHCCCHHHHCCEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC DFPLTNWQVNLFLADANPFYLQGVNGFSKKHPSKDIASYYYSQPFISVKGDILWQGERSS CCCCCCEEEEEEEECCCCEEEECCCCCHHCCCCHHHHHHHHCCCEEEECCCEEECCCCCC VTGTAWFDREWGSKMLAPEQKGWDWFSLRLTKDRALMIYRIRSEKNDFLYGSVMDSSGDI EEEEEEECHHCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCE KILATKDIRLKSQAMVQGNYPQAFTLEVQPLGINLMIKIVNDQQVMRFGIEYFEGMVTFS EEEEECCCEEECEEEEECCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHCCEEEEC GSHKGEGFVEMTGYH CCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA