| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945287
Identifier: 119945287
GI number: 119945287
Start: 1914855
End: 1915637
Strand: Reverse
Name: 119945287
Synonym: Ping_1565
Alternate gene names: NA
Gene position: 1915637-1914855 (Counterclockwise)
Preceding gene: 119945288
Following gene: 119945286
Centisome position: 42.01
GC content: 37.93
Gene sequence:
>783_bases ATGAAAATCACTTACATTGAGTCACCTGAAGGATTGTTGCATGAAGGAACGAAATGGGAAGAATTGAAACAACAAATAAT TTCAGAAAAACCAGAGGTTTTAGTTACCAACGAGATGCCTTTTGGAAGTTGGCTTGCTGTAGAAAACGAATTTAATACAG CAGATGCAGAAGCATCTATTTCAGCGCACAATTATAGTGTAGATGCATTGAAAAAGCTTAATATTCCTATTGTTCTTTCA TCTCGGCCGGTTCCAGTTGACAATAAATTGGCTAATGAAGCATTTGCTCTAGTAAATGGCGAATATAGATTCGCACACCA AAAACATTACTTTCCCGAAGAATCTGGGTTTTATGAGACGGCTTGGTTCCGTACTGGACGAACAGGCTTTGATGTAATCA AAACCGATAAATTAAATGTTGGTTTTCTTTTGTGTACAGAGTTGATGTTCAATGAATGGGCAAGATCTTATCGAAGCCAA GATGCTCATCTTATTGTTATACCAAGGGCTTCTGAGCAAGGCTTTGAGCGTTGGAAAACAGCAGTGGCAATGGCCGCAAT TGTTTCTGGCTGCTATGTTGTTAGCGCAAATCGCGTAGGAAAGTGTGGCAATAAATTAATCTTTGGTGGCAAAGGGTTTG CTTTTTCGCCAGATGGTTCACTTATATCTGAAACTCCATCTGATAATCCTGTAGTTTCATTTCATTTAGATTTTGGTTTT GTTGATAATCAGCAAAAACAATATCCCTGTTATGTACATGAAATAGGGCTTAAATACCAATAG
Upstream 100 bases:
>100_bases ACTGGCTCAATACATTACAATATCACTTGTGCATTGCTTCTTTATTACAAGAAGCTTATCCATAGCCTGATCAAAGCATC TAAATTTGGAGAGTAATAAG
Downstream 100 bases:
>100_bases TACCAATAGGATCGCGTTTTGTCTTTTTGTTAACCACACCACGTATACCCACAACCAAAAAACTGGCATATAAGCTAATA TTGGTTGTTCAAATTGAGAT
Product: amidohydrolase-like protein
Products: NA
Alternate protein names: Amidohydrolase-Like Protein; Amidohydrolase; N-Carbamoylputrescine Amidase; Carbon-Nitrogen Hydrolase Family Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKITYIESPEGLLHEGTKWEELKQQIISEKPEVLVTNEMPFGSWLAVENEFNTADAEASISAHNYSVDALKKLNIPIVLS SRPVPVDNKLANEAFALVNGEYRFAHQKHYFPEESGFYETAWFRTGRTGFDVIKTDKLNVGFLLCTELMFNEWARSYRSQ DAHLIVIPRASEQGFERWKTAVAMAAIVSGCYVVSANRVGKCGNKLIFGGKGFAFSPDGSLISETPSDNPVVSFHLDFGF VDNQQKQYPCYVHEIGLKYQ
Sequences:
>Translated_260_residues MKITYIESPEGLLHEGTKWEELKQQIISEKPEVLVTNEMPFGSWLAVENEFNTADAEASISAHNYSVDALKKLNIPIVLS SRPVPVDNKLANEAFALVNGEYRFAHQKHYFPEESGFYETAWFRTGRTGFDVIKTDKLNVGFLLCTELMFNEWARSYRSQ DAHLIVIPRASEQGFERWKTAVAMAAIVSGCYVVSANRVGKCGNKLIFGGKGFAFSPDGSLISETPSDNPVVSFHLDFGF VDNQQKQYPCYVHEIGLKYQ >Mature_260_residues MKITYIESPEGLLHEGTKWEELKQQIISEKPEVLVTNEMPFGSWLAVENEFNTADAEASISAHNYSVDALKKLNIPIVLS SRPVPVDNKLANEAFALVNGEYRFAHQKHYFPEESGFYETAWFRTGRTGFDVIKTDKLNVGFLLCTELMFNEWARSYRSQ DAHLIVIPRASEQGFERWKTAVAMAAIVSGCYVVSANRVGKCGNKLIFGGKGFAFSPDGSLISETPSDNPVVSFHLDFGF VDNQQKQYPCYVHEIGLKYQ
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29276; Mature: 29276
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITYIESPEGLLHEGTKWEELKQQIISEKPEVLVTNEMPFGSWLAVENEFNTADAEASI CEEEEECCCCHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCEE SAHNYSVDALKKLNIPIVLSSRPVPVDNKLANEAFALVNGEYRFAHQKHYFPEESGFYET EECCCCHHHHHHCCCEEEECCCCCCCCCHHHCCEEEEECCCEEEECCCCCCCCCCCCEEE AWFRTGRTGFDVIKTDKLNVGFLLCTELMFNEWARSYRSQDAHLIVIPRASEQGFERWKT EEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH AVAMAAIVSGCYVVSANRVGKCGNKLIFGGKGFAFSPDGSLISETPSDNPVVSFHLDFGF HHHHHHHHHCEEEEECCCCCCCCCEEEECCCCCEECCCCCEECCCCCCCCEEEEEEEECE VDNQQKQYPCYVHEIGLKYQ ECCCCCCCCEEEEECCCCCC >Mature Secondary Structure MKITYIESPEGLLHEGTKWEELKQQIISEKPEVLVTNEMPFGSWLAVENEFNTADAEASI CEEEEECCCCHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCEE SAHNYSVDALKKLNIPIVLSSRPVPVDNKLANEAFALVNGEYRFAHQKHYFPEESGFYET EECCCCHHHHHHCCCEEEECCCCCCCCCHHHCCEEEEECCCEEEECCCCCCCCCCCCEEE AWFRTGRTGFDVIKTDKLNVGFLLCTELMFNEWARSYRSQDAHLIVIPRASEQGFERWKT EEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH AVAMAAIVSGCYVVSANRVGKCGNKLIFGGKGFAFSPDGSLISETPSDNPVVSFHLDFGF HHHHHHHHHCEEEEECCCCCCCCCEEEECCCCCEECCCCCEECCCCCCCCEEEEEEEECE VDNQQKQYPCYVHEIGLKYQ ECCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA