| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945286
Identifier: 119945286
GI number: 119945286
Start: 1913750
End: 1914169
Strand: Reverse
Name: 119945286
Synonym: Ping_1564
Alternate gene names: NA
Gene position: 1914169-1913750 (Counterclockwise)
Preceding gene: 119945287
Following gene: 119945282
Centisome position: 41.98
GC content: 33.81
Gene sequence:
>420_bases ATGCAAGTCGATTTAAATGATATTGAATTAGCAATAGAATTTGTATCCTCAGCTTATTCATTTGATAACGCAGCTTATTT GAATTCAGAAACTGGTGTGATTTATTATTCTGGAGATGCCGTAGATGAAGAATTACCTGATGACATAGATAAAGTTAGTA AATATATATCAATTCCCTCAAAGCGAGATTTAGAGTTAGGCAAACCTCTTGTTTTGAGCTTTGTTTCTAAAGAGATGCCG GATGAAATTGATAATGTATATTCTATGTTTCGTTCTCATGGAGCTTATTCTAAATTTAAGTCTTTGTTGCAGAGTTTAGA GTACGTGGAGAAATGGTATTCTTACGAAAATGCAGCAGTAAAAAATGCGATCACTGAGTGGTGTAAAGAAAACTCTATCG AGTGTCGCACCGACATTTAA
Upstream 100 bases:
>100_bases TATGCTTGTTCTGGTCTAATCTTTAACAATAAAAATTTTTTAAAATGTGTGTTAGTAACAATGAAAAATAATACACTGTC AAATGTCAAGAGGTAGCAGT
Downstream 100 bases:
>100_bases CAAGTCCAAGCAATCGGACGCTTTGGTCTTGTCGCGGTCTTTGCAAAAACAAAAAGCTAGCAAAAACAGCATCGATCCTA AGTGCCGTTGTTGCAGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MQVDLNDIELAIEFVSSAYSFDNAAYLNSETGVIYYSGDAVDEELPDDIDKVSKYISIPSKRDLELGKPLVLSFVSKEMP DEIDNVYSMFRSHGAYSKFKSLLQSLEYVEKWYSYENAAVKNAITEWCKENSIECRTDI
Sequences:
>Translated_139_residues MQVDLNDIELAIEFVSSAYSFDNAAYLNSETGVIYYSGDAVDEELPDDIDKVSKYISIPSKRDLELGKPLVLSFVSKEMP DEIDNVYSMFRSHGAYSKFKSLLQSLEYVEKWYSYENAAVKNAITEWCKENSIECRTDI >Mature_139_residues MQVDLNDIELAIEFVSSAYSFDNAAYLNSETGVIYYSGDAVDEELPDDIDKVSKYISIPSKRDLELGKPLVLSFVSKEMP DEIDNVYSMFRSHGAYSKFKSLLQSLEYVEKWYSYENAAVKNAITEWCKENSIECRTDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15897; Mature: 15897
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVDLNDIELAIEFVSSAYSFDNAAYLNSETGVIYYSGDAVDEELPDDIDKVSKYISIPS CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC KRDLELGKPLVLSFVSKEMPDEIDNVYSMFRSHGAYSKFKSLLQSLEYVEKWYSYENAAV CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KNAITEWCKENSIECRTDI HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQVDLNDIELAIEFVSSAYSFDNAAYLNSETGVIYYSGDAVDEELPDDIDKVSKYISIPS CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC KRDLELGKPLVLSFVSKEMPDEIDNVYSMFRSHGAYSKFKSLLQSLEYVEKWYSYENAAV CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KNAITEWCKENSIECRTDI HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA