| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945282
Identifier: 119945282
GI number: 119945282
Start: 1907327
End: 1908088
Strand: Reverse
Name: 119945282
Synonym: Ping_1559
Alternate gene names: NA
Gene position: 1908088-1907327 (Counterclockwise)
Preceding gene: 119945286
Following gene: 119945278
Centisome position: 41.85
GC content: 42.91
Gene sequence:
>762_bases ATGTCAAAATTATTACAAGCAGCCATTATAACTGCTAGCATCCTATCTGCCCATGCAGCTAATGCGGCATTAATAAATAT ACTGGAAGACCAGACTAACGCATATGCGCAAGTGACGTATTATCCCGGCGGCAGCAAGGACTGTGATAGCTGCCTTGTCA CCAATCCCGGCACAACCATTGAAACATTTTCCGGTCCTATTTTTCCTGGAGGAGTATTTAGTGGTTATCACCTTACGGGA GATAGAACTGCCTATATTTCCGACGGAAATATGATTGATTCCACTTCATATTCATCTATCAACTATGCCGGTCGGGGTAT CTTACCTGGTTACGAATTTACAGTAAATGCTGGATGGATGGGTGGCCTTGGATATGGATCTGGTATGGCCTTGGCTGAGA CCACTATGAATCTGAAGTTTCTAGTGACAGAAGGTGACTCATCAATATATCTATTTGCGGAAGCGATGGGCGGATCCGCA ATGCTGAGTCTCTATGATGAAACATCGGGAATTCTAGTCTGGGATTTCTTTTATAGGGGTAGTGCAGATAGCGCTGAGAT ACCTCTTTATAGTAATCATATTTATGATCTAACAGGCAGTTTAGATATCTATACCCCGTTTAGTGGGGATCCTGAAGCTA GGTTTGCATTTGAATTTGAAGACAAGCTAACTCTGGCAAGCGTGCCTGCACCCTCAACGGTAACAATAATAATGCTTGGT TTAATGGGATTAGGTTTTCAGCGCGTTAGGGAAAATGCATAA
Upstream 100 bases:
>100_bases GCTAAGTGAACCATTACTCATCGTTTTTTGATAGTAGGTTCCGTAGACAATAACGTCAAATTGGGTGCGCGCTACGTTAA TTCAAGTGGAGTAATAAATC
Downstream 100 bases:
>100_bases AAAGTAAAGTGCTTTTGAATAGCCAAATATATTTAGTCACAATTTTTAATTGTCCGTTTTAACAAAAAAATATTCACTAC AGACAATTATTTAATATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSKLLQAAIITASILSAHAANAALINILEDQTNAYAQVTYYPGGSKDCDSCLVTNPGTTIETFSGPIFPGGVFSGYHLTG DRTAYISDGNMIDSTSYSSINYAGRGILPGYEFTVNAGWMGGLGYGSGMALAETTMNLKFLVTEGDSSIYLFAEAMGGSA MLSLYDETSGILVWDFFYRGSADSAEIPLYSNHIYDLTGSLDIYTPFSGDPEARFAFEFEDKLTLASVPAPSTVTIIMLG LMGLGFQRVRENA
Sequences:
>Translated_253_residues MSKLLQAAIITASILSAHAANAALINILEDQTNAYAQVTYYPGGSKDCDSCLVTNPGTTIETFSGPIFPGGVFSGYHLTG DRTAYISDGNMIDSTSYSSINYAGRGILPGYEFTVNAGWMGGLGYGSGMALAETTMNLKFLVTEGDSSIYLFAEAMGGSA MLSLYDETSGILVWDFFYRGSADSAEIPLYSNHIYDLTGSLDIYTPFSGDPEARFAFEFEDKLTLASVPAPSTVTIIMLG LMGLGFQRVRENA >Mature_252_residues SKLLQAAIITASILSAHAANAALINILEDQTNAYAQVTYYPGGSKDCDSCLVTNPGTTIETFSGPIFPGGVFSGYHLTGD RTAYISDGNMIDSTSYSSINYAGRGILPGYEFTVNAGWMGGLGYGSGMALAETTMNLKFLVTEGDSSIYLFAEAMGGSAM LSLYDETSGILVWDFFYRGSADSAEIPLYSNHIYDLTGSLDIYTPFSGDPEARFAFEFEDKLTLASVPAPSTVTIIMLGL MGLGFQRVRENA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27004; Mature: 26872
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLQAAIITASILSAHAANAALINILEDQTNAYAQVTYYPGGSKDCDSCLVTNPGTTI CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCEE ETFSGPIFPGGVFSGYHLTGDRTAYISDGNMIDSTSYSSINYAGRGILPGYEFTVNAGWM EECCCCCCCCCCCCCEEECCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEEEECCCC GGLGYGSGMALAETTMNLKFLVTEGDSSIYLFAEAMGGSAMLSLYDETSGILVWDFFYRG CCCCCCCCCEEEEEECEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEECC SADSAEIPLYSNHIYDLTGSLDIYTPFSGDPEARFAFEFEDKLTLASVPAPSTVTIIMLG CCCCCCCCEECCEEEEEECCEEEEECCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHH LMGLGFQRVRENA HHHCCHHHHHCCC >Mature Secondary Structure SKLLQAAIITASILSAHAANAALINILEDQTNAYAQVTYYPGGSKDCDSCLVTNPGTTI CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCEE ETFSGPIFPGGVFSGYHLTGDRTAYISDGNMIDSTSYSSINYAGRGILPGYEFTVNAGWM EECCCCCCCCCCCCCEEECCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEEEECCCC GGLGYGSGMALAETTMNLKFLVTEGDSSIYLFAEAMGGSAMLSLYDETSGILVWDFFYRG CCCCCCCCCEEEEEECEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCCEEEEEEEECC SADSAEIPLYSNHIYDLTGSLDIYTPFSGDPEARFAFEFEDKLTLASVPAPSTVTIIMLG CCCCCCCCEECCEEEEEECCEEEEECCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHH LMGLGFQRVRENA HHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA